Pangasianodon hypophthalmus (striped catfish): 113535232
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Entry
113535232 CDS
T05759
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113535232
04020 Calcium signaling pathway
113535232
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113535232
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113535232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113535232
NCBI-ProteinID:
XP_026784273
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MGGQPGVNATLFTRRRGGLIEQRDIVKAHQAHKIQSTPQARRKEWEMARFGDAVPPGHGV
LDGGSERSRTREPPSSSTGGVSPVFKQTKAQRARTMALYNPIPVRQNCFTQNRSLFIFSE
DNVVRKYAKRIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGM
FCFEAGIKIVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAEAHMNIPVDLRTLRAVRV
LRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGRLHKTCIPD
PDIQENETVPDWEAEFPCGDRLCPYKYSCNGSWIGPNDGITQFDNILFAVLTVFQCITME
GWTTVLYNANDALGPTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMK
LRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDVLKRATTIKRRGVDTIRHGPE
EQCVDIASVGGPMNRASIRSVKRGPAAYFRRKERMLRISVRRMVKTHTFYWTVLGLVALN
TICVAIVHHNQPEWLSTFLYYAEFLFLGLFLTEMFLKMYGLGPRLYFHSSFNCFDFGVIV
GSIFEVIWSFFRPGMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLLFL
LFLFIVVFALLGMQLFGGRFIFEEYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQ
GGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEEEEAFNQKHALQ
KAKEVGPMSSFISSERRRRPYLYRKRVLIHRGRTAFSLEESDSFSDAPPLNPSRSFMSRR
ERRRRLTMSVWEQRTSQLRRHRQTSSREVLYGSSVCHHRKLAHSTEIPPSPEISSALDPL
ESLEPSMEEQNVSIPLPDPPESEQSNTKDLHRNTAHTHTDISTTLELLDPLDPAKEEQNM
DNAQLPGNASEEFQDKNHLSVRRPNGERRQRGTRKYSKYSKHSKHRNSETHHQRHDEPNA
HERSRSTSRERRTRNEGEEEEEEKKSNNDGGVGQEGRTAEDRDLASDSEPATLQITDSTT
LESVVTCKAATEGENNNNQDKTSLSTNVVIGDMDTAPGLELSTITTNNKDLEASKSEKED
EEAANRSRTPPDSMFIFKPHNPIRRACHYVVNLRYFEMCILLVIAASSIALAAEDPVATN
SDWNKVLRYFDYVFTGVFTFEMIIKMIEQGLILHDGSYFRDLWNILDFIVVVGALVAFAL
TLLPIEFLELYCNKQLRESTTQSSSEQSSGEGWPQVLQHSVDVTDEDQGPSRGNRMEMSI
FYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNEFQNYFRDTWNIFDFITVL
GSITEIVVDQQSASFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIA
MLFFIYAIIGMQSFSVPCFPFSPLPSLWKCSILPPPPSVHHNSLLGGAPSGRIHYTDMYE
MLTFMSPPLGLGKKCPSKVAYKRLVLMNMPVDAEMTVHFTSTLMALIRTALEIKIARGGE
DRGQMDIELQKEISVIWPHLSQKTLDLLVPIHKASDMTIGKIYAAMMIMDYYKQNKAKKL
RQQLEEQKHAPMFQRMDASSLPQEILCSAKALPFLTHSAGNALTRGGFVALSPISPQELF
MQPITPEQEEEEYTPHYRPQHSPSTVNSEKKLMKRSFSTIGDQCVNGVWQEEFSLERVSP
ERLERPRQRSFRGQRHTHTDCLSFFLRFQGDASESPLPSSSDSRGRRQLPQTPSRPRPHI
SYSPLVCRSHLTTEDSQSRTQSAIEGAGSVLSPASPQRYTSEPYLPLHDDSNSPEEMLTF
EAAIATSRGRGHVVSSAPQLRHTWQMPNGHFRKGCELLSDTDEDDRC
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgggggggcagccaggggtcaacgccactctcttcacccgcaggaggggaggacttatc
gaacagagggacatcgttaaagctcatcaggctcacaagatacagagcacgccacaggca
cgacgcaaagaatgggaaatggctcggttcggggacgcggtgccgccgggccacggcgtg
ctggacggcgggtcggagcgcagccgcactcgggagcctccttcatcctccaccggcgga
gtttctccggttttcaagcagaccaaagcgcagcgcgcgcgcaccatggccctgtacaac
cccatcccggtccgacagaactgcttcacccagaaccgctcgctcttcatcttcagcgag
gacaacgtggtgcggaagtacgccaagaggatcatagagtggccgccgttcgagtacatg
atcttagccaccatcatcgcaaactgcattgttttggctctggagcagcatttacctgga
gaggacaagacgcctatgtcaaagagactggagaaaaccgagccctacttcatcgggatg
ttctgtttcgaggcggggataaagatcgtggctctgggattcgtgttccataaaggatcg
tacctgaggaacggctggaacgtcatggacttcatcgtggtgctcagcgggatcctggcc
actgcagaagctcatatgaacatcccggttgatctgaggacgttacgagctgttcgggtt
ctgcggcccctcaaactggtgtcaggaattccaagtctgcagatcgttttgaagtccatc
atgaaggcgatggttcctctgctgcagatcggcttgttgttattttttgccattttaatg
ttcgccatcatcggcctggagttctacagcggccgcctacacaagacctgcatccccgat
ccagatatacaggagaacgagacggttccggattgggaggcggagtttccgtgtggggat
cgtctgtgtccgtataaatacagctgtaacggatcgtggatcgggccgaacgacggaatc
acgcagttcgacaacatcctgttcgccgtgctcaccgtgttccagtgtatcaccatggag
ggctggaccaccgtcctgtacaacgccaacgatgctttaggtccaacgtggaactggctg
tacttcatccccctcatcatcatcggctccttcttcgtgctcaacctggtgctgggagtt
ctgtccggagagtttgctaaggagagagagcgtgtggagaacaggagagcttttatgaag
ctcagacgtcagcagcagatcgaaagagaactgaatggatatcgagcttggattgaccga
gcagaggaagtgatgctggcagaggagaataagaactcgggtccttcagctctggacgtg
ttaaagagagccaccacgataaagaggaggggagtggacaccatccgacacggtcctgaa
gagcagtgtgtggacatcgcttctgtcggtgggccgatgaacagggcgagtatccgcagc
gtaaagcgagggcccgcggcgtatttccggaggaaagagaggatgttgcgtatctccgtc
cgccgcatggtgaagacacacaccttctactggaccgtgctgggcctcgtggccttaaac
accatctgcgtggccatcgttcatcacaaccagcccgagtggctctccaccttcctctat
tacgcagagtttctgttcctgggtctgtttctgacggagatgttcctgaagatgtacggt
ctcgggcctcgactttacttccactcctcctttaactgcttcgactttggagtgatcgtt
ggcagtatctttgaggtgatctggagtttcttcagaccgggaatgagtttcgggatcagc
gtcctgcgtgcgctccgactgctgaggatcttcaagatcaccaagtactgggcgtctctg
aggaacctggtcgtgtcgttgatgaactccatgaagtccatcatcagtttgctcttcctc
ctcttcctcttcatcgtggtttttgctctgctgggcatgcagctgttcggcggaaggttc
atctttgaagaatacactcctactaactttgatacatttccagctgccataatgaccgtg
tttcagatccttacaggagaggactggaacgaagtgatgtacaacgggattcgctctcag
ggaggagtgaagtcgggaatgtggtcttccatttacttcatcgtcctcacgctgtttgga
aactacacacttctcaacgtcttcttggctatcgctgtagacaatttagccaacgctcaa
gagctcaccaaggatgaagaggaggaagaggaagcgtttaatcagaaacacgcgctgcag
aaggcgaaagaggtcggcccgatgtcgtccttcatttcctcagagcggaggagacggccg
tatctgtacaggaagcgcgtgctgatccaccgcggccgcacggctttctctctggaggag
tcggacagtttcagcgacgctcctccactcaatccctctcgctctttcatgtccaggaga
gaaagacgccggcgtctgaccatgtccgtgtgggagcagaggaccagccagctccggcgc
catcgccaaacgtccagccgagaagtcctctacggctcgtccgtgtgccaccatcggaaa
ctcgcgcactccaccgagatcccgccctcgccagagatcagctccgctctcgaccctctg
gagtctctggagccgtccatggaggagcagaacgtctccatcccgctgccggatcctccc
gaatccgaacagtcaaacaccaaagatctgcaccggaacaccgcgcacacacacacagac
atcagcaccactctggagctcctggatcctctagacccggcgaaagaagagcagaacatg
gataacgcccagttacccggaaacgcctcggaggaatttcaggataaaaaccacttgagt
gtccggaggccaaacggagagcggcggcaacgagggacgcgtaaatacagcaaatacagt
aaacacagcaaacacagaaactcagaaacacaccaccaacggcacgacgagccgaacgca
cacgagcgcagccgctccaccagccgagaacggaggacgagaaacgaaggcgaggaagag
gaggaggagaagaagagcaacaacgatggaggtgtcggtcaagaaggaaggaccgctgag
gacagagatctggcctcagactcggagccggccacgctccagatcaccgacagcacgacg
ctggagtctgtagtaacctgtaaggccgctactgagggagaaaacaacaacaaccaagac
aaaacgtcactcagcaccaatgtagtgattggagacatggacaccgcaccaggcctggag
ctctccaccattacaacaaataataaagatctggaggcctcaaaatctgagaaggaagac
gaggaagcagcgaatcgttcgagaactcccccagacagcatgttcatcttcaaaccccac
aatccgatccgcagggcgtgtcattatgtcgttaatctgcgttattttgaaatgtgcatc
ctgttggtcatcgctgcgagcagtatcgctctggcggctgaagatccagtggccacaaac
tcagactggaataaagtgctgcgttactttgattatgtgttcactggagttttcacattt
gaaatgataattaagatgatcgagcagggcctaatccttcatgatggctcttatttccgt
gatctgtggaacattctggatttcatcgttgtggttggagcgctggtggcgtttgctctc
acgctactacctattgagtttttagagttatactgtaataaacagttgagagaatcgaca
acacagtcgtccagcgaacagtctagcggagaaggctggcctcaggttctccagcactcg
gtggacgtgacggatgaggatcaaggtccgagtcgagggaaccggatggagatgtccatc
ttctacgtcatttattttgtggttttcccgtttttcttcgtcaacatcttcgtcgctctc
atcatcatcaccttccaggagcaaggagacaagatgatggaggagtgcagcctggagaag
aacgagttccagaattatttcagagacacgtggaatatattcgatttcatcaccgtcctg
ggaagcatcacggaaatcgtggtcgaccagcagtcggcttcctttaacatgagcttcctg
aagctgttccgtgcggctcggctcataaagctgctccggcagggatacaccatccgcatc
ctcctctggaccttcgtccagtccttcaaggctctgccgtacgtctgtctgctcatcgcc
atgctcttcttcatctacgccattatcggcatgcagtctttctctgttccatgtttcccc
ttttcccctcttccttctttgtggaaatgctctatccttcctcctcctccttctgttcat
cacaattcactcctcggtggtgcccccagtggtcgtattcactacactgatatgtacgag
atgctgaccttcatgtctccgccgcttggcctgggcaagaaatgcccctccaaggtggct
tataagaggctggtgctgatgaacatgccagtggacgcagagatgacggttcacttcacg
tccactctgatggctctgatccgcaccgcactggagatcaagatcgcacgaggtggagaa
gaccgtggacagatggacattgagcttcagaaagagatcagcgtcatttggccgcacctc
tcccagaagacactggacctgcttgtgcccattcataaagcgagtgacatgacgatcggg
aaaatctacgccgccatgatgatcatggattattacaaacagaacaaagctaaaaagctc
agacagcagctggaggaacaaaaacacgccccgatgttccagcgcatggacgcctcgtcg
ttaccgcaggaaattctgtgcagcgctaaagctctgccgttcctcacacacagcgcagga
aacgctctgacgagaggcgggttcgtggcgttgagtcccatttctcctcaggaactcttc
atgcagccaatcacaccagagcaagaggaggaggagtacacaccccactacagaccccaa
cactcccccagcacggtgaactcggagaagaagctgatgaagcgctcgttctccaccatc
ggggatcagtgtgtgaacggcgtctggcaggaagagttctcgctggagagagtgagtcct
gagcggctggagagaccgcggcagcgcagcttcagaggtcagaggcacacacacactgat
tgtttgtctttttttctccgtttccagggcgatgcttcagaaagtccacttccctcctcc
tcagactccagggggcgtcgccagcttcctcagactccctccaggccccgcccacacatc
tcctattcgcctctggtgtgccgcagccacctgaccacagaggacagccaatcacggaca
cagtctgccatagagggggcggggtctgtgttaagccccgcctccccgcagcgctacacc
tcggagccatatctgcctctgcacgacgactccaatagtccagaggagatgcttacattt
gaggctgccatagcaaccagtcgagggcgtggccatgtcgtaagctccgcccctcagttg
cgtcacacgtggcagatgcctaacggacatttccgaaaaggctgcgagctcctcagtgac
acggacgaggacgaccgctgctag
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