Pangasianodon hypophthalmus (striped catfish): 113535249
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Entry
113535249 CDS
T05759
Name
(RefSeq) neurogenic locus notch homolog protein 2-like
KO
K20994
Notch 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113535249
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
Ank_2
EGF_CA
Ank
Notch
NOD
Ank_5
NODP
Ank_3
Ank_4
EGF_2
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
113535249
NCBI-ProteinID:
XP_026784291
LinkDB
All DBs
Position
Unknown
AA seq
1959 aa
AA seq
DB search
MTQGEGQGETEATPIFLPSLHVIPATLTDKSIKRISSVGVANLSLSGVRCELVDSCVSSP
CANGGTCASLPDGTFSCTCPSGYDGARCLNDVDECAQEPSLCRNGGRCVNTPGSYRCNCA
AGFTGFNCEKVYVPCSPSPCMNGGTCRPTSETSYWCHCLPGFNGTNCEVNIDDCPDHQCQ
NGGTCMDGVNTYNCQCPPEWTGQFCTDDVDECRLQPNTCQNGGTCSNTPGGYTCVCVNGW
SGLDCSENIDDCAAGPCSAGSTCIDRVASFFCNCPFGKTGLLCHIDDACISNPCRAGSQC
DTNPVNGKFNCNCPFGYKGNTCNEDVNECTIPGPNPCEHGGTCENTAGSFICKCARGYTG
PRCEQDVNECGSNPCQNDATCLDQIGDYTCICMPDSPSGCKSDSLSIRLRLPQKGLFPAA
ETRDRVSYRVRNSFAVVLQQAIGFLYSHADPYSLIGRHCEDELVPCATQPCQRGGVCQPS
LDYTSYSCKCPSGWQGTHCTEDVDECKKSPCLNGAHCQNTQGSYKCSCQPGYSGVNCQTN
IDDCSSNPCINGGSCVDKVGRFSCECRPGFYGERCEEEVDECESSPCRHGGTCTDFVNSY
TCQCQPGFNGINCERNIPECTETSCLNNGTCVDGINRFSCRCRPGFTGSFCQYEINECES
QPCRNGGTCTDGLGTFHCTCPMEYTGRFCQSMADLCKNIQCKNGGECVQQETSWRCRCPL
DWSGLYCDIPNISCQNAAHKKGVQVEQLCENGMCVNKDNTHHCLCREGWTGSYCETEIDE
CLSSPCRNGGTCVDYQGGYDCQVKTTNKQTYQGYTGSNCGEMEGYTCANLRCQNGGHCQT
YPSGRPQCVCPSGFSGPQCENEIPSCSCQNGGVCMKDLHKPYSFFCHCLVGYSGEHCQNR
VSSTSCPYLECQERRGDRVCDPQCKIVECDWDGGDCTLQRLRPWDNCTASVPCWEYFHNG
RCDPECDNAGCLFDSFECQKSSPSTPSACKYDLYCRDHYQNEHCNEGCNTEACGWDGLDC
SVDKPPQLAEGTLVIVVLLQPTELLGDMKGFLRSLGMLLHTNLRLKHNEKQEPMVYPYYG
IEHDDLHAGTSTAKRLGKRELGKEVIGSKVYLEIDNRQCSQTSNECFSSTDLAASYIAAE
SLKAELHYPVFSVDSVPHPEDPVHPLLYLVAVAAAIILLILILGVLVAKRKRKHGVLWLP
DGFLAKKDSKRREPVGQDDFGMKSLQKSQMDGSAGHHWPEEELRPKKPRVRHTHTHTHTH
THTHTLTHTFLDELIVIIAFFSRSDGFTPLMLASLRGGSSPECVSVLAEEEEESGVDEPG
TNMISDLIAQGATLNAQTERTGETALHLAARYARADAAKRLLDAGADPNAHDNMGRTPLH
AAIAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMVEELVHCHADVNAVDD
HGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFEAAQVLLDHYSN
RDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHSGSNHVGNGGGGHPSMVCTGNGV
IGMRPGQQNKKNRRGGGGAAKLGGPNGAGGGVKDLKEMKTKRRKKPAGGEATGLAASSGN
IATVTANTNGTKGATTAGTGVLSESSVTMSPVDSLESPHSYTTDAAGAANIAKSPPLMTS
PSTRPLLPPVSHMLGQQQSWVGVAKHGYAAPHVFGHMLPHQMAPTHSGLPQHHHGSGILG
PVNVSVSREQLPSIVTFQMLTSRNQALLKPNQQGAMQVSQTQSQGLNHMHCSQDMMYPMQ
EAGLQHGIPHLHGHAHNIAEPQVRQVTPYHQQLQSPVDKYPTPPSHRSYASGAGSEVVTT
PGQGSEVTTPGHGAPPSSEHPYLTPSPESPDPWSSSSSPHSHSDWSDVTTSPHGALHTHA
HPHSHAHTHVPEQAPLLQPQPSQPVQPPPQQQACSSVYA
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgactcagggcgaggggcagggagagacagaggcaaccccgattttcctcccttcactc
catgtcatcccagccacactgacagataagtccatcaagcgcattagcagtgtgggtgtg
gcaaacttgtctctctcaggtgtgcggtgtgaactagtggacagctgcgtctcctctccg
tgcgccaacggcgggacctgcgcgtctcttcccgacggaacgttctcctgcacgtgtcct
tccggctacgacggggctcgctgcctgaacgacgtggacgagtgcgcgcaggagccgtcg
ctgtgccgtaacggtggcaggtgcgtgaacacccccggctcgtaccgttgcaactgcgcc
gccgggtttacgggcttcaactgcgaaaaggtgtacgtcccctgttctccgtctccctgc
atgaacggcggaacctgcagaccgacatctgagaccagctactggtgccactgtcttcca
ggttttaatggcacaaactgcgaggtgaacatcgacgactgtccggatcatcagtgtcag
aacggaggaacctgcatggacggagtgaacacctacaactgccagtgtccgcccgagtgg
accggtcagttttgcacggacgatgtggacgagtgtcgcctgcagcccaacacctgtcag
aacggtggcacgtgcagcaacacgcccggcggctacacctgcgtgtgcgtaaacggctgg
agcggcctggactgttcggagaacatcgacgactgcgctgccggaccctgctcggccggt
tccacctgcatcgaccgcgtcgcgtccttcttctgcaactgccccttcggcaagaccggt
ttgctgtgtcacatcgatgatgcatgtattagtaacccatgcagggcgggatctcagtgc
gacaccaatcccgtgaacggaaaattcaactgcaactgtcctttcggatacaaaggcaac
acctgcaacgaagacgtcaacgagtgcaccatcccggggccgaacccgtgtgagcacggc
ggcacgtgcgagaacacggccggctcgttcatttgcaagtgcgcacgtgggtacacgggt
ccccggtgcgagcaggacgtgaacgagtgcggctcgaacccctgccagaatgatgccacc
tgtctggatcagatcggcgattacacctgcatctgcatgccagattcaccttcgggttgc
aagtccgactctctatccattaggctacgactgccccaaaagggcttgttcccagctgcc
gaaacccgggaccgagtgtcatacagagtcagaaacagctttgctgtagttttacaacaa
gctataggcttcctttattctcacgccgatccttactctcttatagggaggcactgtgag
gatgagttagtgccgtgtgcgactcagccgtgtcagagaggaggtgtgtgtcagccgtcg
ctggattatacctcctactcctgcaagtgtcccagtggttggcaaggaacccactgtacg
gaggacgtggacgaatgcaagaagagcccatgtctgaacggtgctcactgtcagaacact
cagggaagctacaagtgcagctgtcagcctgggtacagcggcgtgaactgccagacgaac
attgacgactgtagctccaacccctgtatcaacggaggctcgtgcgtagacaaagtgggc
cggttctcgtgcgagtgcaggccgggtttctacggcgagcgatgtgaggaggaggtggac
gagtgtgagagctccccctgcaggcacggaggaacctgcaccgacttcgtcaacagctac
acgtgccagtgtcagcccggcttcaacggcatcaactgcgagcgcaacatccccgaatgc
acggagacctcatgtctgaataacggcacatgtgtggacggtataaaccgtttctcgtgc
cgatgtcgtcccggattcaccggctcgttctgccagtacgagattaacgagtgtgaatca
cagccatgcagaaatggaggcacctgcacagacggcctgggaaccttccactgcacctgt
cctatggagtacactggccgattctgccagtcgatggcggatctgtgcaaaaacatccag
tgtaagaacgggggagagtgcgtgcagcaggagacgtcgtggcgctgtcggtgtcctctg
gactggagcggcctctactgtgacatccccaacatctcgtgccaaaacgccgcccacaag
aaaggtgtacaagtggagcagctgtgtgaaaacggaatgtgtgtaaacaaggacaacaca
caccactgcttgtgtcgggagggctggacgggcagctactgtgagacagagatcgacgag
tgtctgtccagtccctgcaggaacggagggacatgtgtggactaccagggaggatatgac
tgccaggtaaaaacaacaaacaaacaaacatatcagggctacacgggctccaactgcggt
gagatggagggctacacctgtgccaacctgcgctgtcagaacggcggacattgccagacg
tacccctccggccgtccgcagtgcgtctgcccgtccggcttctcgggcccgcagtgcgaa
aacgaaattccatcctgctcgtgccaaaacggaggcgtgtgcatgaaagacttgcacaaa
ccttactcgttcttttgccactgtctggtcggctacagcggcgagcactgccagaacaga
gtcagttccacgtcctgcccttatttggagtgtcaggagcggcgcggcgacagggtgtgt
gacccacagtgtaagatcgtggagtgcgactgggacggaggagactgcacgctgcagcgg
ctccgcccgtgggacaactgcacggcctctgtgccatgctgggagtactttcataacggc
cgctgcgaccccgagtgtgacaacgccggctgcctcttcgacagcttcgagtgccagaag
agctcgccgtccacgcccagcgcgtgcaagtatgacctctactgccgcgaccactaccag
aacgaacactgtaacgagggctgtaacaccgaggcgtgcggctgggacggtttggattgc
tccgtcgacaagccgcctcagctggcggagggcacgctggtcatcgtggtgctgctgcag
cccacagagctgctgggagatatgaagggcttcctgcgctcgctaggcatgctgcttcac
accaacctgcgcctcaagcacaacgagaagcaggagcccatggtctatccgtattacggc
atcgaacacgacgacttgcacgccggcacctccaccgcgaaacgactcggcaagagggag
ctggggaaggaggttatcgggtcgaaggtgtatctggagattgataaccgtcagtgctct
cagacgtccaatgaatgtttctccagcaccgacctggccgcctcgtacatcgcggccgag
tccctcaaagccgagctgcattatcctgtcttctccgtggacagcgttccacaccccgaa
gatcctgtccatccgctcctctacctggtcgctgtggcggccgccatcatcctgcttatc
ctgattttgggcgttttggtcgccaaacgtaaacgcaagcacggcgtcctctggctgccg
gacggcttcctggccaagaaggacagcaaacggagagagcctgtaggccaggacgacttc
ggcatgaagagcctgcagaagtcgcagatggacggcagtgctggtcatcactggccagag
gaggagcttcggcccaagaagccaagggtgagacacacacacacacacacacacacacac
acacacacacacacactcactcacacatttcttgatgagttaatagtaataatcgctttt
ttctctcgctcagatggtttcactcctctaatgctggcgtctctgcggggcggcagcagt
cccgagtgtgttagcgtcttagccgaggaggaggaggagagcggagttgatgagcccggc
acgaacatgatcagcgacctgatcgctcagggtgcgacgctcaacgcacagacggagcgc
acgggcgagacggctcttcacctggccgcccgctacgcccgcgccgacgccgccaagaga
ctgctggacgccggcgccgaccccaacgctcacgacaacatgggccgcacgccgctgcac
gcagccatcgccgccgacgcacagggagtcttccagatcctaatacgtaatcgcgcaacg
gagctggatgcgaggatgaacgatggaacgactcctttaatcctggcagccagattggcc
gtggagggcatggtggaggagctggtgcactgccacgccgatgtaaacgctgtggatgac
cacggtaaatccgccctgcactgggctgctgcggtgaacaatgtggaggccacgctggtg
ctgctgaagaacggcgccaatcgagacatgcaggacaacaaggaggagacgccgttgttc
ctggcggcgcgtgaaggcagtttcgaggcggctcaggtcctcctggatcactactccaac
cgtgacatcactgatcacctggaccggttgccacgtgatacagctcaggagcgcatgcac
cacgacatcgttcgcctgctcgaccagtacaatctggtgcacagcccacactctggatcg
aaccatgtcggaaacggtgggggtggacacccctccatggtctgcaccggtaacggtgtc
atcggcatgcgaccgggtcagcaaaacaagaagaaccggcgtggcggcggcggcgccgcc
aaacttggtggccctaacggtgctgggggcggagtcaaagatctgaaggagatgaagaca
aagcggaggaagaaaccggccggaggagaagcgacaggattggctgcatccagtggtaac
atagcaaccgtgactgctaacactaacggcaccaagggagcaacaacagccggcacgggc
gttctttcagaaagctcagtcacaatgtcgccggtggattcgctagaatcgccgcattcg
tacacgacggatgccgcaggagctgccaacatagcaaagtcacctccgctgatgaccagc
ccctcgacccgccccctcctgcccccagtcagccacatgctagggcagcagcagagctgg
gtgggcgtggctaagcacggctatgccgccccccatgttttcggccacatgcttccccac
cagatggcgccgacgcactcgggcctgccacagcaccatcacggctcggggatcctcggc
cccgtgaacgtctcggtgagccgagagcagcttccatcgatcgtcaccttccagatgctg
acctccagaaaccaggcacttctcaaaccaaaccagcagggggccatgcaggtgagtcaa
acccagtcccagggccttaaccacatgcactgcagccaggatatgatgtatcccatgcag
gaggcggggctacagcatggcatcccgcacctgcacggccacgcccataacatcgcggag
cctcaggtgaggcaggtgacgccttaccaccagcaactgcagagccctgtggataaatac
ccgactcctccttctcaccgcagctacgccagcggggccgggtcagaggtggtgacgact
ccgggtcagggctctgaggtcacgaccccgggtcatggagctccgccctctagcgagcac
ccgtacctgacgccgtcgcccgagtcacccgatccctggtcctcctcgtcttcgcctcac
tcgcattcagactggtccgacgtaaccacaagcccgcacggcgcgctgcacacgcacgcg
caccctcactcacacgcacacactcacgttccagagcaggctcctctgctgcagccgcag
ccctcgcagccagtgcagccgccgccgcagcagcaagcctgcagcagcgtgtacgcgtaa
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