Pangasianodon hypophthalmus (striped catfish): 113535270
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Entry
113535270 CDS
T05759
Symbol
vps35l
Name
(RefSeq) UPF0505 protein C16orf62 homolog
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113535270 (vps35l)
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Others
Retriever complex
113535270 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
113535270
NCBI-ProteinID:
XP_026784312
LinkDB
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Position
Unknown
AA seq
1005 aa
AA seq
DB search
MASVQWHSRTRNYDAESRSCRASAVPVQSGDYHPLKPITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLEGTDPLSLFAAASASETPTLPHSSSSVELGRKRREKEEEVGCDFEPW
SAKRGEILARFTTTEKLSINLFMGSEKSKATSPSSAVSEKVRTRLEELDDLEEGSQRELL
NLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVILFYPSKFVLITDI
LDTFGRLVYERIWSMCSDPAPLPDSFSVEDVNDTARETCLNWFFKIASIRELIPRLYVEA
AILKCNRFVNKSGIQETLPRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKNF
FDLLASFRQIQSDSVQNQLVIQRVEIPVYLTLYSPAIHWILQCVAYRAPDVLLTEMMERC
KKLGNNALLLNSVMWAFRAEFVAARATDFIGMIKECDEAGFPKHLLFGSLGRSLACADPP
ESERLPVLNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRA
FEDAYPQVPHTPPTQEHNLYVITLQITNLRVYAAGNQTTQLLPKIQPKYITVIRIVTLNY
TIATRITLNYLLTVLLQTKSTTTTTAMFSVSAQMFSVSAQVFCQCSGVLSVLRCFVCAQV
FCQCSGFLSVLRCLFCAQMFFFCAQVSFGRDFEQQLSFCVEARATFCNLEPVVIQLIHTV
NHLAMETRRVMGGNHSRKTAAFVRACAAYSFITIPSLSSVFSRLHLYLLSGQVALANQCL
SQADSFLKAAVSILPEVPRVINVEGKQRSSEPFLLDFINNFLSTLLVVPDHPEQGVLYLV
RGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQESYLYTIPKVDSNETLYGGDPKFVA
EISRVCETVIGQVLDYLKTLNQDEGARRQGTLAFALFSCLLAHGDLRNNKLNQLAVNLWN
LSHKNGYCDTRTSVRTLEHIKQQAQQPDMAHLSDMLLRLSLQSRA
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgttcagtggcattctcgtacgcgcaactatgacgcagagtcgcggagctgc
cgtgcgtcggccgtccctgtgcagagcggcgattaccatccgctcaaacccattacagtg
acggattccaagtcgcgacgtggagcacggaaaggcagcacgtcttcatcctcgtcttcc
tccagctctgttgctcctgatcctctgagctccatgctggaaggcacggacccgctgtcc
ctcttcgccgccgcctcagccagcgaaactcccacgctgcctcacagcagctcttccgtg
gagctggggaggaagcggagggaaaaggaagaggaagtgggctgtgactttgagccgtgg
tccgctaagcggggcgagatcctggccaggttcaccaccacagagaagctctctataaat
ctcttcatgggctcagagaaaagtaaagccaccagccccagctctgcggtctcggagaaa
gtgcgcactcgtctggaggagctggacgacctggaggaaggctctcagagggagctcctc
aacctctctcagcaggattacgttaaccggatcgaggaactgaatcagtccctaaaagaa
gcttgggcttcagaccagaaagtcaaagcgctcaaaatcgtcattcagtgctccaagctg
ctttcagacacgtccgtgatcctgttctaccccagcaagttcgtcctcatcaccgacatc
ctcgacacattcggtcgtctggtgtacgaaagaatctggtccatgtgctcggatcctgct
cctctgccagactcgttctctgtggaggatgtgaacgacacggccagagagacgtgtctc
aactggttcttcaaaatcgcctccatcagagagctcatccctcgcctatacgtggaggct
gctatcctgaagtgcaatcgttttgtgaacaaatctgggattcaggagactcttccccgg
ctcacggctatgattcgagggatcggagaccctttagtggccgtgtacgctcgagcctac
ctgtgcagggtgggcatggaggtggcgccgcacctgaaggacagcctgaacaagaacttc
ttcgacctcctggcgtctttccgacagattcagagcgacagcgttcagaatcagctggtc
atccagagggtggagattcccgtctacctcacgctgtattctcctgccatccactggatc
ctgcagtgtgtggcttaccgagcacctgacgtgctgctaacagaaatgatggagagatgc
aagaagctgggcaacaacgctctcctgctgaactcggtcatgtgggcctttcgggccgag
ttcgtggccgcaagagccacggattttatcggcatgatcaaggagtgtgacgaggctgga
tttcccaaacacctgctgtttggctctctgggccgtagcttggcctgtgccgaccctcct
gagagcgagaggctgcccgtccttaacgaggcctggaaggtcatcacaaaagtgcgcagc
ccgcaggactacatcaactgtgctgaaatttgggtggagtttacctgccggcacttcact
aaaagagaggtgaataccgtgctggctgacatcatcaaacacatgacgcctgaccgcgcg
tttgaggacgcttatccgcaggtaccgcacactcctccgactcaggaacacaacttatac
gttattactctccagattacaaacctcagagtttatgctgctggtaatcaaactacacaa
ctgctccctaaaatacaaccaaagtacatcactgttatcaggatcgtaacattaaattac
actatcgctacccgaattaccctgaattacctcttaactgtgctactacaaaccaaatcc
accaccacaactacagccatgttttctgtcagtgctcagatgttttctgtcagtgctcag
gtgttttgtcagtgctcaggtgttttgtctgtgctcaggtgttttgtctgtgctcaggtt
ttctgtcagtgctcaggttttctgtcagtgctcaggtgtttgttctgtgctcagatgttt
tttttctgtgctcaggtatcttttggccgagactttgagcagcagttgagtttctgcgtg
gaggccagagccacgttctgtaacttggagccagttgtcattcagcttattcacacggtg
aatcatttagccatggagacgagacgagtgatgggcgggaatcactcgcgcaaaacggct
gcgttcgtccgggcgtgtgcagcgtacagtttcatcaccattccgtctctcagcagcgtc
ttcagccgcctccatctttacctgctttcaggacaggtggctttggccaatcagtgcctt
tcccaggccgattcgtttctgaaggcagcggtcagtattttgcctgaagtgccccgtgtc
attaacgtggagggtaaacagcgttcttctgaaccttttctcctcgacttcatcaacaac
ttcctgtccacgctgctggtggtgccggaccaccctgagcagggcgtgttgtacttggtg
agaggattgttgaacatggtgcaggattacacgtgggaggacaacagcgacgcaaaagtg
cgtgtgtacatcagtgcgttaccgctgctggctgccatgagtcaggagagctacctttac
accattcctaaagtggactctaacgagacgctgtacggcggcgaccccaagtttgtagcc
gagatcagtcgagtgtgtgaaactgtgattggccaggtgctggattacctgaagactctg
aaccaagatgagggagcgcgccggcagggaactctcgctttcgctctcttcagctgtttg
ttggctcacggagatctgcgcaacaacaaactcaaccagctcgctgttaatctgtggaac
ctgagccataagaacggctactgcgatacgcgcacctcggtgcgcacgctggagcacatc
aagcagcaggcccagcagcccgacatggctcacctctccgacatgctcctgcggctctcc
ctgcagtcacgagcctga
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