Pangasianodon hypophthalmus (striped catfish): 113535287
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Entry
113535287 CDS
T05759
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113535287 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113535287 (drosha)
03009 Ribosome biogenesis [BR:
phyp03009
]
113535287 (drosha)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113535287 (drosha)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
113535287 (drosha)
Messenger RNA biogenesis [BR:
phyp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
113535287 (drosha)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
90S particles
RNase
113535287 (drosha)
Prokaryotic type
rRNA processing factors
113535287 (drosha)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
113535287 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
113535287
NCBI-ProteinID:
XP_026784334
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MSFHPGRGCPRGRPPPQNYPPVPLRLPPPQSLAPSVPPPYPYDPSTPHCSTYSPQCTNTY
MPNMPPRPEFPPYPVPASSQGPQCPLRPPFPPPPLHQGFPEPPNFPPPPLPVPAGGPAPS
QGSYPYVPPPPPPPSMPPSVPFQPPYSMNYPPQPHLPPLPPNFYPPSESGSFKPMEHFHH
FKTDKSPERPRRHKSYGYGGYSGHGERRERGRSPDRRRQEGGRYRSENERGRTPPRHRSR
ERSRERYRHRDSRSSPPSDRHRKRARSRSGSRERKRGRMEEDRERERERERDRERERERE
RERRVEAAGGNRERSYRETEDEEEEELLKPAWIRCTHAENYYSNDPMDQVGDSTVVGTSK
LRDLYERFEEELGRRQERAKSSRPKWEPPKTKLDLDHDESSSDSECDSDGDSSCSSSSDS
EVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEFLS
SSQIPLCRVIRFNIDYTIHFIEEMAPENYCVKGLELFSSYLFQDILELYDWNLTGPEEME
SPACQRFHFMPRFVRFLPADAWLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKV
HHMYMRKKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPNLE
EGGLATYRTAIVQNQHLAMLAKSLSLSLSAGAVYLEGGLEEAKQLFGRLLFNSEDMREVW
LNYPPHPLQVQEPVTDRQLIESSPVLQKLTDFESAIGVFFTHVRLLARAFTLRTVGFNHL
TLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQE
YAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDW
NDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQ
QAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRRERERQERESDDAEDARK
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttcatcctggacgtggatgcccacgagggcgccctccccctcagaattacccc
cctgtccccctgcgtttgccccctcctcagtccctcgcgccctccgtgccccctccctac
ccctatgacccctcgacgccccactgttccacctacagccctcagtgcaccaacacctac
atgcccaacatgccgcctcgtcccgaattccctccctaccctgtcccagcgtcctcccag
ggcccgcagtgccccttgcgccctcctttcccacccccgcctctgcaccagggcttccca
gaaccccctaatttccccccgccccctttacctgtccctgcaggtggccctgccccctct
cagggctcgtatccttacgtcccgcctcctcctcctccaccctcgatgcctccttctgta
ccctttcagcctccctactcgatgaattacccccctcagccccacttaccccctctacct
cctaatttctaccccccctccgaatccggttccttcaagcccatggagcatttccatcac
ttcaagactgacaagtcgcccgaacggccacggcgccacaaaagctacgggtacggtggg
tacagtgggcacggagagcggcgggagcgagggcggagtccggacaggagacgacaggaa
ggagggcggtaccggtcggagaacgagaggggcaggacccccccgagacaccggagccga
gagcgcagcagggagcgctaccgtcaccgggacagcagaagctctcctccatcggaccgc
cacaggaaacgagcccgcagccgctcaggaagcagagagagaaaacgtggacgaatggag
gaggaccgggagagggagagagaaagagaaagggacagggaaagagaaagagagcgagag
agggagaggagggtggaggcagcaggaggaaacagagaaagaagctacagagagacagag
gatgaggaggaggaagagttactgaagccggcgtggatccgctgcactcacgctgagaac
tactactccaacgaccccatggaccaagtgggcgactcgacagtagtgggaacgagtaaa
ctgagggacctgtacgagcgctttgaggaggagctcggacgacgacaggagcgcgccaaa
tcctcccgccccaagtgggaaccacccaaaaccaaactggacctggaccatgacgagagc
tcgagtgactcggagtgtgactcggacggggacagcagttgctccagcagctccgactct
gaggtgtttgacgtgatcgcagagatcaagcgtaagaaagcgcaccccgaccggctgcac
gacgagctgtggtacaacgacccgggacagatgaacgacggtccgctgtgtaagtgcagc
gctaaagccagacgcacaggaatccggcacagtatttaccccggggaagagtttctctcg
tcgtctcagatcccgttgtgcagagtgattcgcttcaacattgattacaccatccacttc
atagaggagatggcacctgagaactactgtgttaaaggtctggagcttttctcgtcgtac
ctcttccaagacatcctggagctgtacgactggaacctcacaggtccagaggaaatggag
tctcccgcctgccagaggtttcacttcatgcctcgcttcgtgcgattcctaccagctgac
gcatggctggccatgactcacccgagtcatcacctgaacttcgggatgaaccccgatcac
gctcgtaactctctgtccaactgcgggatccgtcagcccaaatacggcgacaggaaagtc
catcacatgtacatgaggaaaaaaggaattaacacgttgattaacatcatgtcccggctg
ggtcaggacgaccccactccttccaggattaatcataacgagcgtctggagtttctcggt
gatgctgttgttgaatttctaaccagcgttcacctgtactacctgttccccaacctggag
gaaggaggattagctacgtatcgcactgccatcgtccagaatcagcacctcgccatgctg
gctaagtctctctctctctctctctctgcaggtgctgtgtatctggaaggtgggttagaa
gaggccaagcaactgtttggcaggctgctgttcaacagtgaggacatgagggaggtgtgg
ctcaactatccacctcatccactccaggtgcaggagccggtgacagacagacagctcatc
gaatcgtctcccgtcctacagaagctgacggacttcgagtcggccatcggagttttcttc
acacacgtccgtctgctcgcccgagccttcacactgcgcaccgtcggcttcaaccacctg
acgctaggtcataatcagaggatggagtttttgggagattccatcatgcagctcgtagcc
accgagtatctgttcatccattttcccgaccatcacgaaggccatctgacgctcctgcgc
agctcgttggtgaataacagaacacaggcaaaggtggcggaggaattggggatgcaggaa
tacgcaataacgaacgacaagaccaaaagacctgtcgctctgcgcacgaaaacactagcc
gacctgctggaatctttcattgcagcactttacatagacaaagaccttgaatatgttcac
acgttcatgaacgtctgcttcttcccgagattaaaggagtttatcctgaatcaggactgg
aatgatccaaagtctcagctccagcagtgctgcctcaccctgcgcaccgagggcaaggag
cccgacatccccctctacaagacactacagacagtcggcccgtctcacgctcgcacctac
acggtcgctgtgtacttcaaaggagagagaatcggctgtgggaaaggaccgagtatacaa
caggctgagatgggagctgccatggacgctctggagaaatataacttccctcagatggcc
catcagaagcgcttcatcgagcggaagtaccgccaggagctgaaggagatgaggagagag
agagagcggcaagagcgcgagagcgacgatgccgaggacgctcgcaagtaa
DBGET
integrated database retrieval system
