Pangasianodon hypophthalmus (striped catfish): 113535311
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Entry
113535311 CDS
T05759
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113535311
03041 Spliceosome [BR:
phyp03041
]
113535311
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113535311
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113535311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
RRM_1
KH_KhpA-B
KH_2
KH_Vigilin
RRM_5
UPF0236
Motif
Other DBs
NCBI-GeneID:
113535311
NCBI-ProteinID:
XP_026784354
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MNKLYIGNVSEQTSALDLETIFEQWKIPFSAPFLVKSGYAFVDCPDEKIAMKAIDTLSGK
VELHGKLLEVEHSVPKRQRSCKLQIRNIPPHMQWEVLDGLLAQYGTVESCEQVNTDTETA
VVNVRYAVKEQARQAVEKLNGFMMENYALKVCYIPDETVLSEPPAVGSRRGGAPRGPPRQ
ASPSLGTRPKLQSDIPLRMLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAE
KPITVHSTPEGCSSACRNIMEIMQKEALDTKISEEIPLKILAHNNFVGRLIGKEGRNLKK
IEQDTGTKITISPLQDLTLYNPERTITVKGSIEACARAEEEVMKKIREAYENDVAAMNLQ
SNLIPGLNLNALGLFPGGTTGAVSPSMVPGPLSGAQAGYPSFGQQPESETVHLFIPALAV
GAIIGKQGQHIKQLSRFAGASIKSLSISLSLFISQAQGRIFGKLKEENFFGPKEEVKLEA
HIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPDENDQVVVKITGHFYASQLAQ
RKIQEILSQVRRQQPKSSPTGAPIPRRK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctatacatcggtaacgtaagcgagcagacgagcgcgctcgacttggaaact
atctttgagcagtggaagataccgttcagcgcgccctttttagtcaaaagtggctacgcg
ttcgtggactgccccgacgaaaagatcgcgatgaaggccattgacacactttcaggaaaa
gtagaacttcacggaaaacttctagaggtagagcattcagtccccaagcgtcaaaggagc
tgtaaactgcagatcaggaatatcccaccacacatgcaatgggaggtgttggatggatta
ttagctcaatatggcacagtggagagttgtgaacaagtcaacacggacacggagacagcc
gtagtgaacgtgcgttacgccgttaaggagcaggccagacaagcagttgagaaactgaat
ggtttcatgatggaaaactatgcgttgaaggtgtgctacataccagatgagactgtgctc
tctgaacccccggcagtgggcagcaggagaggaggggcaccacgtggcccaccacgccag
gcctcaccctctttgggtactcgccctaagctgcagtctgacattccgctgcgcatgctc
gtgcccacccagtttgtgggtgccatcattggcaaagagggtgctaccattcgcaatatt
accaaacaaacacactcaaaaattgatatccatcgtaaggaaaatgcaggagcagcagag
aaacccataacagtccattcaactccagagggatgtagctctgcctgcaggaacatcatg
gagatcatgcagaaggaggccttagacacaaaaatctctgaagagattcctctgaagatt
ttggctcataataactttgtggggcgcctgattggaaaagagggccgcaatttgaaaaaa
attgaacaagacactgggaccaaaatcaccatctcacctctccaggacctgactctgtat
aacccagagcgaacaatcacagtgaagggctcaatagaggcatgtgccagagctgaagag
gaggtcatgaagaaaatcagagaggcctatgagaatgatgtagctgccatgaatctccaa
tctaatctgattcctggcttgaatttgaatgctctgggtcttttcccgggtgggacaaca
ggagcagtatccccctctatggtgccaggacccttatctggagcacaagctggataccca
tcttttgggcagcagcctgagtcagagacagtgcatctctttatcccagcactggcagtg
ggtgccatcattgggaagcagggccagcatataaagcagctcagccgttttgctggtgcg
tcaataaaatccctgtctatctcactctctctctttatctctcaggctcagggacgtatc
tttggaaagctgaaggaagagaacttttttgggccaaaggaggaggtcaaactagaagct
cacattaaagtgccatcatttgctgctggaagggtcattggtaaagggggcaaaacggtg
aatgaactacagaacctaactagtgcagaggtggtcgtcccccgcgatcagacaccggat
gaaaatgaccaagtggtagtgaagattactggccacttttatgcaagccagctggctcag
cgaaagattcaggagatcctctcacaggtgaggcggcagcagcccaaatcctcgcctact
ggggctccaataccacggaggaaatga
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