Pangasianodon hypophthalmus (striped catfish): 113535319
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Entry
113535319 CDS
T05759
Name
(RefSeq) CXXC-type zinc finger protein 1-like isoform X1
KO
K14960
COMPASS component SPP1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113535319
03036 Chromosome and associated proteins [BR:
phyp03036
]
113535319
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
113535319
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
113535319
COMPASS/SET1 complex (yeast)
113535319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
NBAS_11th
Motif
Other DBs
NCBI-GeneID:
113535319
NCBI-ProteinID:
XP_026784365
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MDSETSEFDLHSGPEMSMNQGNAPVYCICRKPDINCFMIGCDNCNEWFHGDCINISEKMA
KSIRVWYCEKCRSNDDSLETKFRSKKSRDRESDGDEMERQLEHDTPDFKNDRRRGSRIKR
SARMCGECEPCMRTEDCAQCDFCKDMKKFGGPNKIRQKCRLRQCEVRARKMLRVKEEEYS
MSKGRERFQPDYPLSDEYSENEMELYQQYCAGKYADHGWNSDEDDGSYLDPTMRKRAVKV
KHVKRREKRSEKKKEENKPRKHKPKQKHRDKVRHSERTEARDSGEFRQCLGPGCVESARL
GSKYCSDDCGMKLAANRIYEILPQRIQQWQQSPCIAEEQGKKLLERIRREQQLARTRLTD
MEKRFHELEGIIAKAKQQVVQHDEEVNEGDDDTDLQIFCVSCSHPVNPKVALRHMERCYS
KYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCP
LVRDVFEPTGEYCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRIAMT
NRAGLLALMLHQTIQHDPHSTDLRASKDR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaaacttcagagtttgacctgcattcaggaccagagatgagcatgaaccag
ggcaacgctccagtttactgcatctgtcgcaaaccagacatcaactgcttcatgatcggt
tgtgacaactgcaatgagtggtttcatggcgactgcattaatatatccgagaagatggca
aaatccattagggtgtggtactgtgaaaaatgtcgcagtaacgatgactctttagagaca
aaatttcgttccaagaagagccgggacagagagtcagacggagacgaaatggagagacag
cttgagcatgacacgcctgattttaagaatgatcgtcgacgcgggtcacggattaagcgc
tcggcacgcatgtgcggggagtgtgagccttgcatgcggacggaggactgcgctcagtgt
gacttctgtaaggacatgaagaagttcggcgggcccaacaagatcaggcagaagtgcagg
ctcaggcagtgtgaagtgcgcgcccggaaaatgctgcgggtgaaggaggaggagtactcc
atgtctaaaggccgagagcggttccagcccgactaccccctgtcagacgagtacagtgag
aacgagatggagctctaccagcagtactgcgccggcaaatacgcagaccatggatggaac
agtgatgaagacgatggttcctaccttgatcccactatgcgaaagagagctgtgaaggtc
aagcatgtgaagaggagagagaaacgatctgagaaaaagaaagaggagaataagccccgt
aaacacaaaccgaagcagaagcacagggacaaggtgaggcacagtgagaggacagaagct
cgagacagcggggaattcagacagtgcctcgggccaggctgcgttgaatctgcgcgtctc
ggctccaagtactgctctgatgactgcggcatgaagctcgctgccaaccggatctatgag
atcctccctcagcgtatccagcagtggcagcagagcccctgcatcgccgaggagcaggga
aagaagcttctggaacgcatccggcgcgagcagcaattagcccggacacggctcacggat
atggagaaacgtttccatgagctggagggcatcatcgctaaggcaaagcagcaagtcgtg
caacacgacgaagaggtaaacgaaggagatgatgacacggatcttcaaattttctgcgtc
tcctgcagtcacccggtcaaccccaaggtggcgcttcgtcacatggagagatgttattcc
aagtatgagagtcagacatcatttggctctatgtatcccacacgcatagagggtgccacg
aggctgttctgcgacgtgtacaatcctcaaagcaaaacatactgtaaaaggcttcaggtt
ctctgtcctgagcattcccgagatccaaaggttccagcagatgaggtgtgtggatgtcct
ttggtgcgtgacgtctttgagcccacgggcgagtactgccgagtgtcgaaacgcaagtgc
aacaaacactactgctgggagaaactccgccgggccgaggtggacctggagagagtgcga
gtgtggtacaaactggacgagttgtttgaacaggagcgcaacgtccgaatagcaatgacg
aatcgcgcaggtctcctggctcttatgctacatcagacgattcaacacgacccacattca
acagacctgcgcgccagcaaagacagatag
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