Pangasianodon hypophthalmus (striped catfish): 113535344
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Entry
113535344 CDS
T05759
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
113535344 (fgd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113535344 (fgd1)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
113535344 (fgd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_11
FYVE_2
PH_13
RHG20_PH
PH_2
zf-RING_5
PH_16
Motif
Other DBs
NCBI-GeneID:
113535344
NCBI-ProteinID:
XP_026784403
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MQLNRPRSALIGFSPPPPPPPPSDPHPTFSSQFKTMRFSYHLSPQPGSRRTGPSASSPRL
LTKSLSLEPGPCPGAHEAPQRLCSDPGPLGLQHCNGTSESEPQNAPPLPPKTRPPLPGPK
PQVPPKPPHLQQQSGRRPRPPDKPLPPPPSRPLPADPRQSRTGLPRAEGSSSPTCVLSLI
ERFEREQIIMVPDITGGVMCMPRVPEPQPTTDSILPCTSLNEPVEPPSVEKEQEKETEEE
EEKEEEVKEEGEVQEDIEEDDNELGASCSEKRLSTESGYGASDKLLDAMEIRDLGQSEIP
PDRLSLPPQQTDTKLANRDSGIDSISSPSHSEELCFAGDDREVCMSLPRLSSSSSCGCVE
GPAGEGAVAAVEEGTRDSEGDSDLEEGSGDESENAMAIGPQPKAERQDSVELSVQQRVFN
IANELLHTEKAYVSRLHLLDQVFCGRLMEEARARGSFPCEVVMGIFSNICSIYCFHQQFL
LPALEKRMEEWDVNPRIGDILQKLAPFLKMYGEYVKNFDTAMELVNTWMERSSQFKAIIH
DIQKEEMCGNLTLQHHMLEPVQRIPRYELLLKDYLHRLPEDAEDFKDAQKSLELIATAAE
HSNAAIRKMERMRKLLKVYELLGGEEDIVNPTNELIKEGHILKLSAKNGTSQDRYLILFN
DRLLYCVPKLRLIGQKFGVRARIDVDGMELKETSSMNMPRTFLVSGKQRSLELQARTEEE
KKDWIQAIQATIQRHEQSVETFRMLNCSVREDDCTPPNSPNCTELGKRAPTPIREKEVTL
CMKCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLLYDNNRANRVCIDCYTTLVGVPPS
PASLTNSTQRRRSILEKQASVAAENSVLCSFLHHMEKGSGRGWQKAWFVIPENEPLVLYI
YGAPQDVKAQRSIPLIGFEVSLPESCDRLERRYAFKMSQSHLTVYFSAEGEELQRRWMEV
LSRAGRGEELQVHGPISEALEEEAEEPSSLGEST
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaccggccccggagcgcgctgatcggcttcagcccgccgccaccgccgccg
ccgccgtccgacccgcacccgaccttctccagccagttcaagacgatgcgcttttcctac
cacctcagcccgcagcccggatcccgcagaaccggcccgtccgcgtccagtcctcggctc
ctgactaagagtctgtctctggagccaggcccatgtccaggagcccatgaggcccctcag
cgtctctgttcggaccccgggcccctgggactgcagcattgcaatggcacaagcgagagc
gagcctcaaaacgccccacctttgcccccaaaaacacggccgccattacccggtcccaaa
ccacaagtgcccccgaaaccaccacatctccaacaacagagcggccgccgaccccggccc
ccggacaaacccctgcccccgcctccatcccgcccactcccagcagaccctcgccaatca
cggacaggcctgccgcgggccgagggaagctcctccccgacgtgtgtcctgtcactcatc
gagagatttgagagggagcaaatcatcatggtgcctgatatcacagggggagtgatgtgt
atgccgagggtacctgaaccacagcccactacagactctattttaccctgcacttccctc
aacgagcccgtggagcctccttctgtcgagaaggagcaggaaaaagaaacggaggaagag
gaggaaaaagaggaggaagtcaaagaggaaggggaggtacaggaggacatagaggaggat
gataatgagctgggagcctcctgctcggaaaagcgactctccacagagtccggctacggc
gcctccgataaactcctggacgcaatggagataagagacctcggccaatcggaaatcccc
cctgaccgcctgtcccttcctccgcagcaaacagacactaaactagctaatcgggacagc
ggcattgacagcatcagctctccgtctcacagtgaggaactgtgcttcgccggcgatgac
agagaggtgtgcatgtctcttcctcgcctctcctcctcttcctcatgcggttgtgtggaa
ggaccagcaggagaaggagctgtcgctgccgtggaggaaggaacgagggactcagaggga
gacagtgatttggaagaagggagcggggatgagagcgagaacgccatggccatagggcct
cagcccaaagcagagagacaggactctgttgagctatcagtgcagcagcgtgtgtttaac
atcgccaacgagctcctccacacggagaaggcgtatgtgtccaggcttcacctcctggac
caggtgttctgcgggcggctgatggaggaggcgcgagcacgaggctctttcccctgcgag
gtggtgatgggcatcttttccaacatctgctctatctactgcttccatcaacagttcctg
ctgccagctctggagaaacgcatggaggaatgggacgtgaacccgcggatcggggacatc
ctccagaaactggctcccttcctgaagatgtacggcgaatatgtgaagaactttgacacg
gccatggagctggtgaacacctggatggagcgctcgtcacagttcaaagccatcattcac
gacattcagaaagaggagatgtgcggaaacctcaccctacagcaccacatgttagagccc
gtacagcggatccctcgctacgagctccttctgaaggactacctgcaccggctgcccgag
gatgctgaggactttaaagatgcacagaaatctttagagctgattgctacagcagctgag
cattccaacgcagccattaggaaaatggagcgcatgaggaagttgttgaaagtgtatgag
ctgctcgggggagaagaggacattgtgaacccgactaatgagctcattaaggagggacac
atcctcaaactgtcggccaagaacggaacctcgcaggacagatacctcattctgttcaac
gaccggttgctgtattgtgtccctaaactcagactgatcggacagaaatttggagtgcgg
gcacggattgatgtagacggcatggagctgaaagagacgagcagtatgaacatgccacgg
acgtttctggtgtcgggaaaacagcgatctctcgagttacaggccaggactgaagaagaa
aagaaagactggattcaggcgatccaggccactatccaaaggcatgagcagagcgtggag
acgttcaggatgttgaactgttcggtgcgtgaggatgattgcacgccccccaactctccg
aactgcacagagctgggaaagcgtgctcccactccgatccgggaaaaagaagtgacgctg
tgtatgaagtgccaggagccgttcaactccattaccaagagacgccaccactgcaaagca
tgtggacatgtggtatgtggaaaatgctcggaattccgtgcccggttgttgtatgataac
aatcgagcaaatcgtgtgtgtatagactgctatactacgctggtgggagtcccgccctct
ccggccagcttgaccaatagtactcagagaagacgctccattttagagaaacaggcctct
gtggcggcggagaacagtgtcctgtgcagcttcctgcaccacatggagaagggcagtggc
cgtggctggcagaaagcctggtttgtcatccctgaaaacgaacctctggtgctttacatt
tatggtgctccacaggatgtgaaggcccagcgcagcatccctctcattggcttcgaagtc
tccctccccgagtcatgtgaccgtctggagcggcgctacgccttcaaaatgagccagagt
cacctgactgtttacttcagcgccgagggggaggagctccaacgccgctggatggaggtg
ctctccagagccgggagaggggaggagctacaggtgcacggtccaatctcggaggctctg
gaagaagaagcggaggaaccgagctctctaggagaaagcacatga
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