KEGG   Pangasianodon hypophthalmus (striped catfish): 113535405
Entry
113535405         CDS       T05759                                 
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9
  KO
K02211  cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113535405 (cdk9)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:phyp01001]
    113535405 (cdk9)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phyp03021]
    113535405 (cdk9)
Enzymes [BR:phyp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     113535405 (cdk9)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     113535405 (cdk9)
Protein kinases [BR:phyp01001]
 Serine/threonine kinases: CMGC group
  CDK family
   113535405 (cdk9)
Transcription machinery [BR:phyp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     113535405 (cdk9)
    Brd4/P-TEFb complex
     113535405 (cdk9)
    7SK RNP complex
     113535405 (cdk9)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr
Other DBs
NCBI-GeneID: 113535405
NCBI-ProteinID: XP_026784476
LinkDB
Position
Unknown
AA seq 397 aa
MQRDKTGSSAVSGDKPDRETAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKH
RQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRYKGS
IYLVFDFCEHDLAGLLSNANVKFTLSEIKKVMQMLLNGLYYIHRNKVGISHHPLLPIHVH
AVVRDFXXXXADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGG
GCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPGVDKKYELYQKMELPKGQKRK
VKERLKAYVKDPYALDLIDKLLVLDPAQRVDSDDALNHDFFWSDPMPSDLKHMLSTHNTS
MFEYLAPPRRRGHMPQQPANQNRNPATASQSEFDRVF
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgcagcgcgacaagactggaagctcggcggtgtctggcgataaaccggaccgggagacc
gccatcatgtccaaatactacgatggcgtcgagtttcctttttgcgacgagttttctaag
tacgaaaagctcgccaagatcggccaaggcaccttcggggaggtgttcaaggccaaacac
aggcagactggcaagaaagtagcgctgaagaaggtgcttatggaaaatgagaaagaaggg
tttcccatcacagcactgagggagatcaagatcctgcagctgctgaagcacgagaacgtc
gtaaatctgattgagatctgtcgaacaaaagccactcagtttaaccgttacaagggcagc
atatacctggtgtttgatttctgcgagcacgatctggccggcctgctaagcaacgccaac
gttaagttcacgctatcagagattaagaaggtcatgcaaatgctgctgaatggactctac
tacatccacagaaacaaggttggcatttcccatcatccccttcttcctatacacgtccat
gctgttgtaagagattttttnnnnnnnnntgctgattttggcctggcaagagccttcagc
ctggcaaagaacagccagggcaatcgctacaccaaccgagtagtgacactgtggtaccga
cctccagagctcctgctgggagagcgtgattacgggccacccatcgatctgtggggtgga
gggtgtatcatggctgaaatgtggaccaggagccccatcatgcagggaaacacagaacag
caccagctcactctgatcagccagctgtgtggatctattactgctgaagtgtggcctggc
gtggataaaaaatacgagttgtaccagaagatggagttacctaaaggacagaagcggaag
gtaaaagagcgtctgaaggcgtatgttaaagacccatatgctctggatctgatcgataag
ctgctggtgctggacccagcgcagcgtgtggacagtgacgatgctctcaaccacgacttc
ttctggtctgaccctatgccctctgacctcaaacatatgctctccacacacaacacgtcc
atgttcgaatacctggctcccccacggcgccgcggtcacatgccccaacagccggccaat
cagaaccgcaacccagctacagccagccagtctgagtttgaccgtgttttctga

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