Pangasianodon hypophthalmus (striped catfish): 113535492
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Entry
113535492 CDS
T05759
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113535492
04020 Calcium signaling pathway
113535492
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113535492
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113535492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113535492
NCBI-ProteinID:
XP_026784606
LinkDB
All DBs
Position
Unknown
AA seq
2430 aa
AA seq
DB search
MRGNVQSNSKWLERRSAVVYAVRSVILRTWRMLTLGVEYSSWAHTAELSDRQRMRRVAMA
DVSHTATLVELDQTCEAVQSMDQSSNYNTITDLERPDDLKGTDIISAHEMCQDDVMLWWS
RMARFGDDASGRYGAAPGAGRAGARPGGAPGAPRLYKQSMAQRARTMALYNPKQTKQNCF
TVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPANDKTPMSER
LDDTEHYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILAKVGSDFDLR
TLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGVELYMGKF
QKTCFKNGTEELAADYPCGSEPSSRQCPNGTECRKGSAWKGPNYGITNFDNILFAILTVF
QCITMEGWTDILYHTNDALGNTWNWMYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEK
RQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDQNAEEKSPLDGAWYKRKQNNPVLK
RAKVKKGKNDLIGGEEGEEHFTDISSVAPPGSPFARASLKSSKNDSSSYFRRKEKRVRFF
IRRMVKAQSFYWIVLCIVGLNTLCVAIVHYDQPEGLTQALYLAEFVFLGLFLSEMTLKMY
GLGPRNYFHSSFNCFDFGVIVGSIFEVVWAAIQPGASFGISVLRALRLLRIFKVTKYWNS
LRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQIFGGQFNFENETPTTNFDNFPAAIM
TVFQILTGEDWNAVMYHGIESQGGVPLGMFSSVYFIILTLFGNYTLLNVFLAIAVDNLAN
AQELTKDEEEQEEAAKKSIALQKAMEVKEVSPMSAANISIAAFVKQNRDVLSRSSSVSSV
HSLSYVYTPVHRFVSKEQQRSLQKMSVWEQRTSQLRRHNLRNSSEALYSELEPEDRLRMS
SALHLRPDMKAHHDRPLLVDKSHPPEGRDTPEEAPPHKHHRCRGENGEAGEGRRHRHHHR
GHQDGGHRNQEEDGDDDREHRHHHSHRSRETDGDGINGVKGERNPRGHREGEAGNGERRR
HRPRIKAQTTLDKEESRDSKERDTPSHRDRLMDAEGDGLSSSPVQSPTERQEDSDNLKNS
TKARSTAVSIPVTITAPPGETTIIPMNNIDGESLLLNEEKKDLDELNQNAPKQILPYSSM
FVFGQSNPVRRLCHYVVNLRYFEMCILVVITMSSIALAAEDPVNAAAFRNNVLKYLDYIF
TGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSSFMGSQQSVTRGT
KGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVI
AVQLFKGKFFYCTDESKALEKECRGQFLDYDGDKVEAKARVWKKYDFHYDNVLWAFLTLF
TVSTGEGWPMVLKHSVDATYEDQGPSPGYRMETSIFYVVYFVVFPFFFVNIFVALIIITF
QEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPQDKQSFQYKMWKFVVSTPFEYSILT
MIAINTVVLMMKFSTAPKPYEDTLKWLNIIFTALFTLECILKIIAFGLLNYLREAWNIFD
LVTVLGSITDILFTEIKTQNKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKAL
PYVCLLIAMLFFIYAIIGMQVFGNIELNDESAINHHNNFQTFFQALMLLFRSATGEAWHE
IMLSCLGGKKCDKLSGSNDNGCGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRD
ASILGPHHLDEFIRVWADYDPAACGRISYLDMYEMLRHMSPPLGLGKKCPSRVAYKRLVR
MNMPIADDNTVHFTSTLMALIRTALDIKLASGVLAQRLCDADLRREINKVWPSLSSNTVD
LLVTPHKHNELTVGKVYAALMIFDYYKQNRAKRLQEQQPTSGALSKMGSLFKPMLPLTHI
HEQEPSIKSAKLPPFQTDSSPHPEFPPTTPLLTNGEPVKSSTMKNSPSAETLQKGRNSIY
SEDVPKTESQELVEMTDMENNSDVGGFSTLEGHGRAASMPRLSTGFQRSQLRHTTGIYLA
PITDGSPMRRSASSLTYQRGGTELNLRDYALERPPAAQTQEKERDRAHQHHHHHRCHRRR
EKKHKSLDRAISEEQPGSVDLSNEPRDRAREQERDRGRSHERKHHSSSATDRKQRYYSCD
RYGTREHCHSRSPGPSRATSPGEPQEPNRFKTGVNSAKGSPVVFTSGSSTPCRGRRQLPQ
TPLTPRPAVAFKSTSSSPLQMAANRSSGPVPTYLSRGQSEHDALLGITHQPSPVPVTRIG
SDPNLGPLQRDPHLSEAEDFHDALSTYSSGRFPRTVSATHSSPGVVPSMLQHSRSGVPNG
YHFTLGISASLGSSARISPSYQDTEKDDWC
NT seq
7293 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaaatgtgcagtctaactccaaatggctggagaggagatccgctgtggtttat
gctgtgcgctcggtaattcttagaacatggcggatgctgacactgggagtggagtacagc
tcctgggctcacaccgctgagctctctgacaggcagaggatgaggagggtagcaatggct
gatgtgtcacacactgctacactcgtggagctcgatcaaacatgtgaagctgtccagagc
atggatcagtccagcaactacaacaccattactgacctagagaggcctgatgacctgaag
ggtacagacattatcagtgcgcatgagatgtgccaagatgatgtcatgctgtggtggagc
aggatggctcgcttcggggatgatgcgtcggggcgctatggagctgcgccgggcgcgggg
agagcaggagcgcggccgggaggcgcaccgggcgctccgaggctctacaagcagtcaatg
gctcagagagcccggaccatggctttgtacaaccctaagcagactaagcagaactgcttc
accgtcaaccgctcgctcttcatcttcagcgaggacaacgtgatccggaaatacgcaaag
aggatcaccgagtggcctccatttgaatacatgatccttgcaaccatcattgccaactgt
attgtactggcactggagcaacatctgccagctaatgacaagacgcccatgtcagaacgc
ctggacgacacagagcactactttatcgggatattctgttttgaggctggcattaagatc
atcgccctgggctttgtctttcacaaaggctcctaccttcgcaacggctggaacgtaatg
gacttcgtggttgtcctcaccgggattttggccaaggtgggttcagactttgacctgagg
acgctgcgggccgtgcgagtactgagacctctcaaactggtgtcaggaattcctagtcta
caggtggtgttgaagtccataatgaaggccatggttcctctgctgcagatcggcctgctg
ctcttctttgccattgtaatgttcgccattataggagtggagctttacatgggcaagttt
cagaagacctgcttcaaaaacgggacagaggagctggcagcagattacccatgtggctcg
gagccttcatctaggcagtgtcccaatggcacggagtgtaggaaaggcagtgcatggaaa
ggaccaaactatggaatcaccaactttgataacatcttgttcgccatacttactgtcttc
cagtgcatcaccatggaaggatggactgatatcctttaccataccaatgatgccttgggc
aacacgtggaactggatgtacttcatccccctcatcatcatcggctccttcttcatgctc
aacctggttctgggtgtcttatcaggagagtttgccaaagaaagagagcgtgtagagaag
agacaggagtttctgaagctacgcaggcaacaacaaattgagagagagttgactggctat
ctggagtggatctgtaaggcagaagaggtgctgctggctgaggaagatcagaacgcagaa
gagaaatctccactggacggagcatggtacaagaggaaacagaacaacccagtgctgaaa
agggccaaggtcaagaaggggaagaatgacctcatcggtggcgaggagggtgaggaacac
ttcacagacatttcctcagttgcaccccctggatctccctttgcccgtgccagcctgaaa
agcagcaagaacgacagctcgtcatacttccgtcgcaaagagaaacgagtgcgcttcttc
attcgccgcatggtgaaagcccaaagcttctactggattgtgttgtgcatagtgggactg
aacacgctgtgcgtggccatcgttcactacgaccagcctgaaggactcacccaagcactg
tacctggccgagtttgtgttcctgggtctgtttctatctgagatgactctgaagatgtac
ggcctggggcccaggaactacttccactcctcattcaactgctttgactttggggtcatc
gtggggagtatatttgaggtggtgtgggcagccatccaaccaggagcctctttcggtatt
agtgtcttgagggctctgcgcttactccgaatatttaaagtgaccaagtattggaactct
ttgaggaatctggtggtgtctctgcttaactcaatgaaatctatcatcagcttgctcttc
ctcctcttcctctttattgtggtctttgccttactgggcatgcagatcttcggaggacag
tttaattttgagaacgaaacacccactacaaattttgacaacttccctgccgccataatg
accgtcttccagattttgacaggagaagactggaatgcagtgatgtatcatgggattgag
tctcagggtggcgtcccacttgggatgttctcctccgtttactttatcattcttactctc
tttggaaactacactcttcttaatgtgttcttggctatcgctgtcgataaccttgccaat
gctcaggagctgacaaaggatgaggaggagcaagaggaggcggccaaaaagagcatagca
ctgcagaaggccatggaggtgaaggaggtcagcccgatgtcagcagctaacatttccatc
gcagcttttgtaaagcaaaatcgagatgtgctctctcgcagctcttccgtcagcagcgtt
cactcactgagttatgtctacacccctgttcatcgctttgtgagtaaggagcagcagcgc
tctctgcagaagatgtctgtctgggagcagcgcacttcgcaactacgtcgccacaacctg
cgcaacagcagtgaagcactctacagcgagctggagcctgaggatcggctgcgcatgtcc
tcagcgctacacctgcggcccgacatgaaggcgcaccatgatcggcccttgctggtggat
aaatcgcacccgccggagggcagggacaccccagaggaagcacctccacacaaacaccac
cggtgccgtggggagaacggcgaggctggagaaggacgccgccatcggcaccaccacaga
gggcaccaggatggaggacacaggaaccaggaggaggatggtgacgatgatagggagcac
cgtcaccaccattctcaccgatccagagagactgatggtgatgggattaatggagtgaaa
ggagagcgaaatccgagagggcacagagagggtgaagcagggaatggtgagaggaggaga
cacaggcctcgcatcaaagcccaaaccacgcttgacaaggaggagagcagggacagcaaa
gagagagatacaccaagccacagggacaggcttatggatgcagagggtgatggtttgagc
tcgagtcctgtgcaatctcctactgagagacaagaggactcagataacctaaaaaacagt
accaaggctagatcaactgcagttagcatccctgttaccatcaccgccccaccgggagag
accaccatcattcccatgaataacatagatggtgagagcctgctcctgaatgaggaaaag
aaggatctggatgagctaaatcagaatgctcccaaacaaatcttaccctacagctccatg
tttgtgtttggtcagtccaatcctgtgcgaaggttgtgtcactatgtggtgaacttgcgc
tactttgagatgtgcatcctcgtggtgattaccatgagcagcatcgcgctggctgcagaa
gaccctgtgaatgctgctgcttttcggaataatgtgctaaaatatttagattacatcttc
actggtgtgttcacatttgaaatggtgataaagatgatagacctcgggctgcttctccac
ccgggctcctacttcagagacctgtggaatattctagactttattgtggtcagcggtgcc
ctggtggcctttgcctgctcgagcttcatgggatcacaacaaagcgtgaccagagggacc
aaaggcaaggacatcaacaccatcaagtccctcagggtcctccgagtgctccggcctctg
aagaccatcaaaaggctacctaaactcaaggcggtgtttgactgtgtggtgaactctctg
aagaacgtgctcaacatcctcattgtctacatcctcttcatgttcatctttgctgttatc
gccgtgcagctcttcaagggaaagttcttctactgcacagacgaatccaaagctcttgag
aaggaatgcaggggtcagtttctggactacgatggagacaaggtggaagccaaggcacgt
gtgtggaagaagtacgattttcactatgacaatgtgctgtgggctttcctcaccctcttc
accgtttctacaggagaaggttggcctatggtgctaaaacactctgtagatgccacttat
gaagaccaagggccgagcccaggctaccgcatggagacgtccatcttttatgtggtctac
tttgtggtcttcccgtttttcttcgtcaacattttcgtagccttgatcatcatcacattc
caggagcaaggggacaaagccatgtctgagtgcagcttggagaagaatgagcgggcgtgc
attgactttgccattaatgccaagcccctgactcgctacatgccccaagataagcagtcc
ttccagtacaagatgtggaagtttgtggtttcaacgccgtttgaatattccatcctgact
atgattgcaatcaatactgtggttcttatgatgaagttcagtactgctccgaagccttat
gaggacacgctgaagtggctgaacatcatcttcactgccctcttcaccctggaatgtatc
ctgaaaatcatcgcttttggtctgctgaactacctgagagaagcctggaacatattcgac
ctcgtaacagtactgggcagtatcactgacatcctgtttactgaaattaagacgcagaac
aagctaatcaacctaagctttctgaggctgtttcgagctgctcgactcatcaagctcctg
aggcaaggctacaccatccgtatcctgctctggacctttgtccagtcttttaaggcactg
ccgtatgtgtgtctgctcattgccatgctcttctttatctacgccatcattgggatgcag
gtgtttggaaacattgagttaaatgatgaatcagcaatcaaccatcacaacaacttccag
accttctttcaggcacttatgctacttttcaggagcgccacaggcgaggcgtggcatgag
attatgctgtcgtgtttgggtggcaagaaatgtgacaagctctcaggttccaatgacaat
gggtgtggcagtgattttgcatacttctatttcgtctccttcatcttcctctgctcgttc
ctgatgctgaatttgttcgtggctgtcatcatggacaactttgagtacttgacacgagat
gcttccatcctcggccctcaccatctggatgagttcatccgcgtctgggcagattacgac
cccgctgcctgtgggcgcatatcctacctcgatatgtacgaaatgctacgtcacatgtca
cctccgctaggtttgggaaagaaatgtccatcgcgagttgcctacaagcgcttggtgagg
atgaacatgcccattgctgatgacaacacagtccacttcacgtccacgctgatggctctc
atacgcacagccctggatatcaaactggcatcaggtgttcttgcccagcgtctctgtgat
gctgacttgaggagggagatcaataaagtgtggcccagcctgtcatcaaacactgtggac
ttgctggtaacacctcataaacataacgagttgacagttgggaaagtgtatgctgcgctg
atgatctttgattactacaagcagaaccgggccaaaagactccaggagcagcagcccact
tcaggagcactgagtaaaatggggtctctcttcaagcccatgttacccctcacccacata
cacgaacaagagccatcaatcaagagtgccaaactgccaccttttcaaactgattcatct
ccacatccagagttccctcccacaacccctctcttaaccaatggggagccagtaaaaagc
agtaccatgaagaattctccttcagcagagacgcttcagaagggaaggaattccatttat
tcagaagatgtgccaaaaactgaatctcaggaattagtagagatgacggatatggagaat
aattctgatgtagggggcttctccacactggagggccacgggagggcagcatcaatgccc
agacttagtacaggcttccagcggagccagttgcgccacaccaccgggatatacctagca
cccatcacagatggcagtcccatgcggcgctcagcctcctctttgacttatcagagagga
gggacagagttgaatttgagggattatgcattggagcggcccccagcagcacagacacag
gagaaagagagagacagagcacatcaacatcatcatcatcatcgttgtcatcgccgcaga
gaaaagaagcataaatccctggaccgagctatcagtgaggaacagcctggctctgtggat
ctgagcaatgagccgcgggatcgagcgcgtgaacaggagagagaccgaggacggtctcat
gagaggaaacaccactcatcctcggccactgacagaaagcagcgttactactcctgcgat
cgctacggaaccagagagcactgtcacagtcgatcacctgggccaagcagagctacatca
cctggagagccacaagaacccaacagattcaaaacgggcgttaactcagctaagggcagc
ccggtggtcttcacctcaggctccagtacaccatgccgtggaaggagacagctccctcag
acaccgctcaccccaaggcctgcagtagcctttaagtctaccagctcgtccccactgcag
atggctgccaaccgctcatcggggccagtccccacctacctgagccgtgggcagtcagag
cacgacgccctccttggcatcactcaccaaccatctcctgtgcctgtcactcggatcgga
tctgaccccaacctcggccccctgcagcgagacccccacctgtcagaggctgaagatttc
catgatgctttgagcacctacagctcaggacgttttccaaggacagtctctgctacccat
tcatcccctggggtggtgccatccatgcttcagcatagccggagtggagtgcctaacggg
taccacttcaccctgggcattagtgcatctctgggttccagtgccaggatttccccgagc
tatcaggatacagagaaagatgactggtgctga
DBGET
integrated database retrieval system
