Pangasianodon hypophthalmus (striped catfish): 113535503
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Entry
113535503 CDS
T05759
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113535503
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
113535503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
113535503
NCBI-ProteinID:
XP_026784624
LinkDB
All DBs
Position
Unknown
AA seq
1780 aa
AA seq
DB search
MIRRSRISVRPNVKPTGRAAATSRETPQGTETPADLSNDAGVKAGGQEVVAEVKAASTVP
ATETNDNAESQSGDVTSQSDLSVTTADVAGQSASTSSLSTRRKRFSVLPNLSKPRSTPAS
TLTSSKLPKTPVRPDSTPEIPPASTLTSSDVSESPEKHESTQESAPEPLPVSTKSFRSPA
PKLPSSSVHNASRASRFPTKAVITTELTPDKALSTPESAPELPPAALAPSDGKSKRRKPK
PVTPSQDNVETPSVRLDEVESQSANQNAAAHPDSCPSEEVHSDPASVSESQNEPVVPDGS
DLSSPGKSKKPQQHVPLALRTLNDPVDRLRLARARKLRELLKKEMNKEKQKEKHQRPQTG
MSERKKTKDHTKMTMRELIYYLPSTNPMKSYTEEEQRAETDFPSSPKAAPAVQTATEQNA
AEEEEEEEEQGGEEEEPMLAPRVKVAEDGSLIIDEESLTVQVQRMKGPNPVEERDPIFER
GSTTTYSSFRKGTYTKPWSNRETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKKEE
RANSWRIDKAFKEKRRLDLDFFNKLLEQILKDEEEKRKKKKHASQMAKIPRRRPGERKRK
IYSSDSEEDESSSSDAMEGEKENESVCNDAGSSATPKRKRAGASQKRSKHANQSAEQEAE
EEAERRANEESSPVHELDSVEEETESFGVKPVRRWRNRGPVVQRKAQDTHTSAREDSAKE
SASNDSENEEEPDLTAIQENILNKPTRSGRIPKLSQHMIRAAADEEDDEEEEQLPPPPLP
PDARPRGSQAKRGRWRAPRRGKSRLLTLRASATEEEEDEEEDYGTNQEEENYSLNAEEEN
QAFVPMGLRSVTTVQSEVEETMEELDISVNVPDVLGISQNAVCPESSCERALAPMGSVPC
EHQLDLLVGVIEFLAPDHMEVSEEAARTLLTIGHSAHVTQTEELSSTGDVIIVEESSSQV
HEGVLVETMDQSETRVETCDVVTSDPSSSITLQTDPVSTVSTGDKTLTPTPLQDSASTAE
PGSSPESKVLSNEIQPETSNVIIPEPAASKTRRNRLPKPKPNLSRASRTVQKEPAEAVTT
TAETINAPVKAHVEAKTVESQTSTAKDFIPKPPSQPEPEEQNAEICEERENDRTEGCSSV
LSLEKKMEDEVSGKTTCVEDERKEETQQTHNESKSRSSGSECSVKPSQSVRRCRGPKPKP
NLVRSVRTTHAVTDIQQNQAAVPDEKQAAAIISTDVQQPDEGAHVIPEPERETPNDPVTE
IPDANPEELPRSVCESSTSDEPVFILSLTEVLPTLTEGAGLVTEPLALPATSGLLSEPIS
AIENATADVGGTGPAGDQVFSQLLPDVLIPVSEEQETENRENETSRGKEEESSSRIRRRE
HSPLTQNITAPEGPDEPAVEPSASSRKAEENTEENVDLSAKRRKLPERGRRAKLQIKPNP
VQRKTCRDLPPSDETRSADASSCEMMLEETEPRQMSLEIVSSLASTEAASSSAVLDKEEA
ASSSAILDKEPGASSSAILDKEEASSSSAILDKEEAASSSAILDKEEAASPADILDKEEA
ASSADILDKEEAASSSAILDKEAASSSDILFKNSKTSTASSPVISPPPVRTETPPPQAAS
SSSSSASASSQGVVGNIDLPGTDPVEPSASGVGAGSQPVNQITPLASPRPLTRPGRRPKG
FLSFMSSTSTQRPSESTRAPQKPAVITSRTERRRAAPSTSAPPPPPAPPPTPPPHVSSHT
QAETSSVNPSAAEGDEEPTSVAAYFFNDIFTVVDEQEELD
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcaggtcgaggatcagcgtgcgtcccaacgtgaagccgacgggccgagctgca
gcgacgtctcgagaaactcctcaggggactgagacgcccgctgacctcagtaatgatgca
ggggttaaagctggaggtcaggaggtcgtcgcagaagtcaaagctgcttctactgtcccg
gccacggagacgaacgacaacgcagaaagccagagcggtgatgtaaccagccaatcagat
ctcagtgtgaccacagcggacgtggcgggccaaagtgcatccaccagctctttgtccacg
aggagaaagcgctttagtgtcctgcccaacctcagcaaacccagaagtactccagcctcc
accctcacctcctctaaactccctaaaactcctgttagacctgattctacccctgaaata
ccccccgcctccaccctcacctcctctgatgtttccgaatcacctgaaaaacatgaatcg
actcaggaatctgcaccagaaccacttcctgtctccaccaaatcatttcgatctcctgcc
cccaaactgccctcttcatccgtccacaacgcttcaagagcctctagatttcccactaaa
gctgtaatcaccacagaacttacccctgataaagccttatctaccccagaatctgcccca
gagctgccccctgctgcactcgccccatcagatggcaaatcaaagcggagaaaacccaaa
cctgtaactccatctcaggacaacgtagagacaccatcagtcagactggacgaagttgag
tcccagtcagccaatcagaatgcagcagcgcatcctgattcttgccccagtgaagaagtt
cactctgatccagcgtcggtttccgagtcgcagaacgaaccagtcgtcccggatggaagt
gacctcagctctccagggaaaagtaagaaaccacagcaacacgtccctctggccctgagg
accctgaacgacccagtggatcgtctcagattagcgcgagccagaaaactccgagagctt
ctcaagaaggagatgaataaagaaaaacagaaggagaagcaccagagaccacagactgga
atgagcgagcgcaaaaaaacaaaagatcacaccaaaatgaccatgagagagctcatctac
tacctaccgtctactaacccgatgaagtcgtacactgaggaggagcagagagctgagacg
gatttcccttcttctccaaaagcagctccagctgtccagacagcgacagaacagaacgca
gcagaagaggaggaggaggaggaggagcaaggaggagaggaggaagaaccgatgctggct
ccgagagtgaaggtggccgaggacggatctctcatcatagacgaggaaagtttaaccgta
caggtgcagaggatgaagggaccgaatccggtggaggagagagatccgatatttgagcgc
ggatccaccaccacctactccagctttaggaaaggcacttacacgaaaccctggtccaac
cgagagacggacatgtttttcttggccattagcatggtggggacggacttctccatgatc
ggacagctgtttcctcatcgagctcgaatagagattaagaataagtttaaaaaggaggaa
agagcaaactcctggagaatagacaaagcgttcaaggagaaacgacgcttggatctcgat
ttcttcaacaagctgctggaacagatcctcaaagacgaggaagagaaacgcaagaaaaag
aaacacgcctcccagatggccaagattccccgtcggagaccaggagagaggaagaggaag
atctattcttcagactcggaggaggacgaaagctcgagcagcgatgccatggagggagag
aaggagaacgagagtgtgtgtaatgatgcaggaagcagcgctactccgaagaggaagaga
gcaggagcgtcacagaagagaagtaaacacgcaaaccagtcagctgaacaggaagcagag
gaagaagctgagagacgcgctaatgaagagtcgtcacctgttcatgagttggactctgtg
gaagaagaaactgagagctttggtgtgaaaccggtgcggaggtggaggaacagaggtcct
gtggtgcagagaaaagctcaggacacacacacctcagccagggaagacagcgccaaggag
tcagcctcaaatgactcggagaacgaggaggagcctgatctgaccgccattcaggagaac
attctcaacaagccgacgaggtcgggccggatccctaaactctctcagcacatgatccgt
gcagcagcagatgaagaggatgatgaggaagaggagcagcttccacctccccctcttcct
cctgatgctcggcctcggggctctcaggctaaacggggcagatggcgcgcccctcgcagg
ggcaaatccagactgctgaccctacgtgcctcggctactgaggaagaagaggatgaagag
gaggattatggtacaaatcaggaggaagaaaactattccttgaatgcggaggaggaaaac
caggccttcgttccgatggggctacgctctgtgacgacggtccagtctgaggtggaggaa
accatggaggagctggacatctcagtaaacgttcctgacgtcctgggaatttcccagaat
gccgtgtgccctgagtcgtcctgtgagagggcgctggcccccatgggctcagtgccctgc
gagcatcagctcgacctgctcgttggtgtgattgagttcctggctccggaccacatggaa
gtgtctgaagaagcagcgaggactctcctgaccattggacattctgctcacgtgacccaa
actgaagaactgtccagtacaggtgatgtcatcattgtcgaagagtcatcgagccaagtc
catgaaggagttctcgtggaaacgatggatcaatctgagaccagggttgaaacctgtgac
gtggtgacctctgacccttcttctagcattaccttacaaactgatccagttagtaccgtc
agtacgggagataaaactttaacaccaactcctctgcaggactccgcctctacggcagag
ccgggtagctctccggaaagtaaagttctgtctaacgaaatccaaccagagacctcaaac
gtcatcattccagaaccagcagcttcaaagacacgaaggaaccgtctgcccaaacccaaa
cccaacttgagcagagcctccagaaccgtgcaaaaggagcctgcagaagcagtcaccact
actgcagaaacgatcaacgctccagtaaaggctcatgtagaagcaaaaacagtggagtcc
caaacatcaacagcgaaagacttcattcctaaaccaccctctcagccagaacctgaggaa
cagaacgcagaaatttgtgaagaaagagaaaatgacagaactgaaggatgtagctctgtc
ctgtcgctagagaaaaagatggaggatgaagtttcgggaaaaacaacatgtgtagaggat
gagagaaaagaagaaacacagcaaacacacaatgagtctaaatcgcgttcttcgggttct
gagtgctctgtgaaaccctctcagtcggtcagaagatgtcgaggacccaaacccaaacct
aacctggtgcggagcgtcagaaccacacacgccgtcacagacatccagcagaaccaagca
gcagttcctgatgagaaacaagctgctgcaatcatttctactgacgttcagcagccagac
gagggcgctcacgtcatcccagagccagaaagagaaactccaaacgatcctgtaacggag
attcctgatgctaatcctgaggaacttcctagatctgtgtgtgaatcttcaacttctgat
gagccggtgtttattctctctctcactgaggtcctgcctactctcacagaaggggcgggg
cttgtaactgagcctctcgcacttcctgcaacatcaggattgctctctgagccaatcagt
gccattgaaaatgccactgctgatgtgggaggtaccggtccagctggagatcaggtcttc
tctcagctcctccctgatgtattgattcccgtctcagaagagcaagagactgagaacaga
gaaaatgaaacaagccgaggaaaggaggaggaaagctcgagccgaatcagaagaagagaa
cattctcctttaactcagaacattactgctccagagggacctgatgaaccagctgtggaa
ccatcagcatcaagccgtaaggctgaggagaacactgaggagaacgttgacctttctgct
aagaggagaaaacttccagaaagaggcagaagagcaaaactgcagatcaaacccaaccca
gttcagagaaaaacctgtcgtgaccttccgccttcggacgagacaagatctgcagatgct
tcctcatgtgagatgatgttagaagaaacagaaccacgacagatgtcattagagatagtt
tcttcattggcctcaacagaagcagcttcctcatcagccgttttggataaagaagaagca
gcttcatcatcagccattttggataaagaaccaggagcttcatcatcagccattttggat
aaagaagaagcatcttcatcatcagccattttggataaagaagaagcagcttcatcatca
gccattttggataaagaagaagcagcttcaccagcagacattttggataaagaagaagca
gcttcatcagcagacattttagataaagaagaagcagcttcatcatcagccattttggat
aaagaagcagcttcatcatcagacattttgtttaaaaacagcaaaacttccactgcttcg
agtcctgtaatctcacctccacctgtcaggacagagactccgccccctcaggctgcgtct
tcttcttcttcttctgcttctgcttcttcccaaggcgttgtgggaaacatcgaccttcca
gggactgaccctgtggagcctagtgccagtggggtgggggcggggtcacaacctgtcaat
caaatcacacccctggcttcacccaggcctctgacgagacctggtaggagacctaaaggc
ttcctgtccttcatgtccagtacaagcacacagagaccctcagagtccactcgggctcct
caaaaacccgccgtcatcacgtctcgtacagagcggagacgagccgcaccgagcacctcc
gctccgcctccgcctccagctccgcctccaactccacctccacacgtgagctcacacacg
caggccgagacgtcgagcgtgaacccgagcgcagcagaaggagacgaagagcctacgagt
gtcgcagcgtacttcttcaacgacatcttcaccgtagtggacgaacaggaggagctcgac
tga
DBGET
integrated database retrieval system
