Pangasianodon hypophthalmus (striped catfish): 113535519
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Entry
113535519 CDS
T05759
Symbol
ric1
Name
(RefSeq) RAB6A-GEF complex partner protein 1 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113535519 (ric1)
Membrane trafficking [BR:
phyp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
113535519 (ric1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
ANAPC4_WD40
Beta-prop_EML_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
113535519
NCBI-ProteinID:
XP_026784650
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
MYFLTGWPRRLLCPLQSAEEPFHIQPSSQRFYFAVLSDTQLSVWFSRPSVLIVSYIESEK
AAAQFGFYQQAEWKPDDSMIAVAAANGYVLLFDIVGGGDEKYLYEPIYPKGSVRVKVTPG
YKEEQCAPALSVEMKKPVDLEAPITSLQSLQEDLLVCTADGYLHMLHWDGVCNGRRAVNL
STIPFSLDLQSSRGGPCLDLNGVHIREMEYCMTLDGFAVVLDDGRLGFITPTANRFSTEQ
LQGVWAADVTDGTCVAVNNKYRLMAFGCASGSVLVYMIDNTTGSMQLSHKLELSPKHYPD
IHNKTGPVKLIRWSPDCSVVMVTWACGGLSMWSVFGAHLVCTLGEDFTYRSDGTKKEPLK
ISSMSWGAEGYHLWVIGSTEAGTEQSPQLSQASILQFQFIKSALTVNPCTSNQEQVLLHG
EDRLLMTCGDAAVQMHNQEQHSARSTTHTQLSTLLGHKHWHVVQIHSTYLETNWPIRFAA
IDSAGQCLVVAGRRGFAHYSLYTRKWKLFGNITQEQSMTVTGGLTWWNDFVVVACYNFID
QQEELRLYLRSSNLDNAFASVTKLHAETLLLNVFRNTIILFRTDCSICLYSIEKKQDGSS
VSVDLLQEVSMSRYIPHPALVVSVTLTSVRTETGMSLKTTQQACNAESILLNLAGQLIML
QRDRSCPQVRDKDTSASQKTLLPFSPPVVLAQCVESVWASSHSGSKKRHLVEALWLSCGE
SGMKVWLPLFPRRENRKPHSFLSRRIMLSFLLDIYPLAVLSEDALVLGAANDTLLYDSSF
SSKDGLGGNSSSSLEGIGGDSSTKESLSRRPSTFSLSREPPESFFPFCLVERTSQIYLHH
LLRQLLVRNLGEQALLLAQSCSSLPYFSHVLELMVHVVLEEEATSREPIPDPLLPTVAKF
LAEFPLFLRTIVHCARKTEFNLWNYLFAAVGNPKDLFEECIMARDLDTAASYLIILQNME
APAVSRQHATLLFNTALEQGKWDLCRHMIRFLKAIGSGESETPPTTPTSQEPSSTGGFEF
FRHRSISLSQSAETASTGKFNLQKTFSMPSGPSTKGKESDSAENMYIDMMLWRHARRLLE
QIRLKDLGCFSAQLGFELIGWLTRERTRVARIVDFVSALKCLHNDFLWPFPVLPAGSPLK
NGRCRAVLSTRLLKSRSNDSLLNSDMDTVPPQITTNHNWLDGLGAEPKEIDSASSHGAPQ
TQEAFLSPLINKTEECSIGSATDLTETSSMVDGDWTMVDENFSTLSLSQSELEHISMELA
NKGPHKSQVQLRYLLHVFLEAGCLEWSIVIGLILRDVSVIKQVLGFLDSADPETVQSVQA
GLIAIDQWASSDCLGYKPFLNLIAPELQKLCDVSVDQVQLDSFQPSISKMADPVLPRVEE
HRGVSTFTLPMTLEIPAGSAPRIKEDNHKEESEDEAADEGAYDCTLS
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctgacgggctggccgcggaggctgctgtgcccgctgcagagcgccgaggag
cccttccacatccagcccagctcgcagcgcttttacttcgccgtgctgtcggacacgcag
ctcagcgtctggttcagcaggcccagcgttctgatcgtgagttatatcgaatcggagaag
gcagctgctcagtttggtttctaccagcaggccgaatggaagccagacgactccatgata
gcggtggcggctgctaatggatacgtgctgctgttcgacattgtcggaggtggagatgaa
aaatatctgtacgagcccatctatccaaagggtagtgtgcgtgtgaaggttactccaggg
tataaagaggaacaatgtgctcctgctctcagtgtggaaatgaagaagccagttgacctg
gaggctcctattaccagtcttcagtctctgcaggaggatttgttagtgtgtacggctgat
ggctatctgcacatgctgcactgggatggagtgtgtaacggccggagagctgttaacctc
agcaccattcctttctctctggacctgcagtcatcacgcggtggtccgtgtttggatctg
aatggagtccacatcagagaaatggagtattgtatgacgttagatggtttcgctgttgtg
ctcgatgatggaaggctcggcttcatcacgccaaccgctaacaggttctccaccgagcag
ttgcagggcgtttgggcagcggatgtgacagacggcacatgtgtagcagtgaacaacaaa
tacagactgatggctttcggctgtgcaagtggctctgtattggtctacatgatagacaac
actacaggatcaatgcagctgtcacacaaattggagttaagccccaaacactacccagat
atccataataaaacaggtccagttaagctaatccgttggtctccggactgtagcgttgtc
atggtgacctgggcatgtggaggtctctctatgtggagtgtgtttggagctcatctcgtc
tgcacactcggagaggacttcacatatcgatcagatggcactaagaaggagccactcaag
atcagctctatgagctggggggcagagggttaccacctgtgggtgattggcagcacggag
gcgggcacagagcagtctccacagttaagccaggcctccatcttgcagtttcagttcatt
aagagcgcactcacagtcaatccctgtacgagtaatcaggagcaggtgcttctccacggt
gaggatcggctgctgatgacgtgtggagatgctgcagttcagatgcacaaccaggagcaa
cactcagcacggagcacaacacacacacagctcagcactttactgggacacaaacactgg
cacgtagtgcagattcacagcacatatctagaaactaactggccaatacggtttgcagcc
atagactcagcaggtcagtgtttggtggtagcggggagacgcggatttgcacattactca
ttatataccaggaaatggaaactgtttggaaatattacacaggaacagagtatgactgtg
accggaggtctcacctggtggaatgactttgtcgtcgttgcctgttacaacttcatcgac
cagcaggaggagctgagattatatctccgctcatcgaacctcgacaacgcctttgcaagc
gttacaaagctgcatgctgaaactttgctgctcaacgtgttcagaaacacgatcattttg
tttcgcaccgactgctccatctgcctttatagcatcgaaaagaagcaagacggctcttca
gtgtctgtagatctactacaggaagtgtcgatgtcacggtatattcctcatcctgcgctg
gtggtttcagtcacactcacttcagtcagaacagagacgggaatgtcactgaaaaccaca
cagcaggcatgtaatgcagaaagtattttgttgaatttggctggtcagctcattatgctg
cagagagaccggtcttgcccacaggtacgagacaaggacacatcagccagtcagaaaacg
ctgctgcctttctctccgcctgtggttttggctcagtgtgtggagagtgtgtgggcctcg
agtcactctggttctaagaagcgccacctggtggaggctctgtggctgtcatgcggcgag
tcagggatgaaggtgtggctccctctgttcccacgccgcgagaaccgcaaaccgcactca
ttcctctcgcgccgcatcatgctctcattcctccttgacatctacccgctcgccgttctg
tcggaggacgcgctcgttttgggtgctgctaatgacactcttctttatgactcctctttt
tcctccaaagatggcctcggaggaaactcctcctcctctttggagggcattggaggagat
tcttccaccaaagaaagcctttctcgcaggccctccacgttttctttgtcccgggagccc
ccggagtcgttttttccattctgcttggtagaaaggacatctcagatctacctccaccac
ctcctccgtcagctgctggtgagaaatttgggcgagcaggccttgttgttggctcagtca
tgctcatcgctgccttatttctcgcacgtgctggagctgatggtgcacgtggtgctggag
gaggaggccacgtctcgcgagcccatccctgacccgctgctgcccaccgtggccaagttc
ctggccgagtttcctctgttcctgcgcaccatcgtccactgcgcccgcaagactgagttc
aacctctggaactacctgtttgctgctgtcgggaacccaaaagatctcttcgaggagtgc
atcatggcccgggatctggacacggcagcttcgtatctcatcatactgcagaacatggag
gctccagcagtgagtcgtcagcacgctactctcctcttcaacacggcacttgaacaagga
aaatgggatctctgtcgtcacatgatccgattcctcaaggccattgggtcgggggagagc
gagactccacccactacgccaaccagtcaggagccgagctctactggaggatttgagttt
tttcgccatcgcagtatcagtctgtctcagtcagcagaaacagcttctacaggaaaattc
aatttacagaaaaccttcagcatgccttcaggaccctccactaaaggtaaggagagcgac
agtgctgagaacatgtacatcgacatgatgttatggcgtcacgcgcggcgtttgctggag
cagatccgtctgaaggatcttggctgtttctcagcgcagctgggcttcgagctgattggc
tggctgacccgtgagcgcacacgtgttgctcgtatcgttgattttgtctctgcccttaaa
tgcctccataatgacttcctgtggccttttcctgttctccccgctggctccccgctcaaa
aacggacgttgtcgagcagtgctgagcacacgtctgctgaagtctcggtctaacgatagc
ttactgaacagcgatatggacacagtaccacctcagatcacaaccaatcacaactggttg
gatggactgggggcggagcctaaagagattgactcggcctcttcacacggcgctccacaa
acacaagaagcctttctgtctcctctcatcaataaaacggaggagtgcagtatcggctca
gccacagatctaacagagacgagctccatggtggatggtgattggacgatggtggacgag
aacttctccaccctgagcctcagccagtcagagctggagcacatctccatggagctggcc
aataagggtcctcacaagtcccaggtgcagctgaggtacttgctgcatgtgtttttagag
gcaggatgtttggaatggagcattgtgattggtctgattctgcgtgatgtcagcgttata
aagcaagttttgggctttttggattctgcggatccagaaacggttcagagtgtacaagcc
ggactcatcgctattgaccagtgggcttcgtctgattgtctgggttacaagcccttcctg
aacctcattgctcctgagctgcagaagctgtgtgacgtctccgtggatcaggttcagctc
gactcatttcagccgtccatctccaagatggccgacccagttctcccccgtgtggaggaa
catcgcggggtctcaacctttaccctccctatgactcttgagatccctgctggctccgcc
cctcgtattaaggaggacaaccacaaggaggaatcggaggacgaggcagctgatgagggc
gcttatgactgcacactctcatga
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integrated database retrieval system
