Pangasianodon hypophthalmus (striped catfish): 113535545
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Entry
113535545 CDS
T05759
Symbol
sema4d
Name
(RefSeq) semaphorin-4D isoform X1
KO
K06521
semaphorin 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
phyp04090
]
113535545 (sema4d)
CD molecules [BR:
phyp04090
]
Proteins
113535545 (sema4d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
I-set
ig
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
113535545
NCBI-ProteinID:
XP_026784717
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MNHPSPLDAMTYKGNLTLPKIPESNMALSVLGVFLGLLLEVSAHGPSSVPRTSWRHEEVS
LAEFSEPGVFNYSTLLLSEERGALYVGAREAIFELDINDVSVKNNQVLWKVPNRDMRLCT
LKGKSEETDCQNYIRVLQVLDEEHLYVCGTHAFQPLCDYLSLKDFTLMGKQDDGRGKCSF
DPTQSFTTVMVDGELYSGTAYNFLGSEPIISRFSRPQSLLRTEYSTSWLNEPSFVFADVI
REGSNSQDGDDDKIYYFFTEVSVEYEFFGKLLIPRIARVCKGDLGGQRTLQKKWTSFLKA
KLVCSMPELNFVFNVVHDVFIVKTPDWRETVIYGVFTSQWGNMGLSAVCAYNMTSVDEVF
SKGKYMQKATVEQSHTKWVQYNGITPSPRPGACINNQNRKQNITNSLLLPDKTLQFVKDH
PLMADPVLPIGHGPRLTAKDVNYTQIVVERVTALDNRVYDVLFTATDKGFLHKSVVFEGG
SHIIEEIQLLKNPQPIKTLLLSTKEGSFLYAGSDSGVVQSPAAFCDKYMTCTDCILARDP
YCAWDTHATTCINIFQKQDNRQHRKFIQNLRGDAGECPSARPRSIDRPQQVVVKPGSSAE
LLCSVRSNLAQVFWKVNDSILTESGHFLLMGDSGLLIYSVAPQNQGRYDCWTVESAAGKN
FTRLVASYNLQLERPEISPVSSVEIVNIPDPDSSSSRTISTTTAPRGNNGNSNTAGPSPL
TPSTLSSVPPPPLTRPATTANVYGAKAETKHYVPPQSSDSRNQGPEIKDPHAKYLQYDNS
NALLFLFLLFFLLFLFGLGYNCYMQYLPGPCLRLRAAVLGSQKKPQREYTACEGGLMEVL
PEKRDRNEPPRQNGALRDTGYETEPESGNGKIPSNSYEEDNDSTLKQGPFDINCESQPIE
YADADAS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacccatcgcctctcgacgccatgacgtacaaaggtaacctcacgctacccaag
atcccagagtctaacatggctctcagcgtgctgggagttttcctgggattgcttctggaa
gtttccgctcacggaccatccagtgttcccaggacttcgtggagacatgaagaggtgagc
ttggcagagttctccgagccaggcgtgtttaactactccactctgttgctgagtgaggag
cgaggtgcgctgtacgtcggggccagagaggccatctttgagctcgacatcaatgacgtg
tcagtcaaaaataaccaggtgctgtggaaggttccgaaccgtgacatgagattgtgcacc
ttaaaagggaaatctgaagagacggactgtcagaactatatccgggttcttcaggtgttg
gatgaagagcatctgtacgtgtgtggaacccatgcgtttcagccgctctgtgattacctg
tctttaaaagacttcacgctgatgggaaagcaggacgatggcagagggaagtgttcattc
gaccctactcagagttttaccacggtcatggtcgacggcgagctgtactcggggacggcg
tataacttcctgggcagcgagccgatcatctcgagattctcgaggcctcagagcctgctg
cgcacagagtactccacgtcctggctcaacgagcccagcttcgtgtttgcagacgtgatc
cgggagggaagcaacagtcaggacggagacgacgataagatttactacttcttcacagag
gtctccgtggagtacgagttctttggcaagctgctgattccccgtatagcccgtgtgtgc
aagggggatttgggaggacagaggactctgcagaagaagtggacatccttcctgaaggcc
aagctggtgtgctccatgcccgagctcaacttcgtcttcaacgtcgtccatgacgtgttc
atagttaaaacccctgactggagagaaacagtcatctatggggtcttcacttcccagtgg
gggaacatgggcctctctgccgtgtgtgcgtataacatgacatcagtggacgaggtgttc
tctaaggggaagtacatgcagaaggccacggtggagcaatcccacaccaagtgggtccaa
tacaacggcatcacaccctctcccaggcccggagcgtgcattaacaaccagaaccgcaag
cagaacatcaccaactccctgctgctcccggataagacgctgcagtttgtgaaggaccac
ccgctcatggccgaccccgtgctgcccatcggccacgggccgcgcctcaccgccaaggac
gtcaactacacacagatcgtcgtggagagagtcactgccctcgacaaccgcgtctacgat
gtcctcttcaccgccaccgataaaggatttctgcacaaatccgtggtgtttgaaggaggc
tcgcacataatcgaagagatccagctgctgaaaaacccacagccaatcaaaaccctgctg
ctctccacaaaagagggcagcttcctgtacgcgggttcggactcaggagtggtccagtct
ccagctgcgttctgtgacaaatacatgacctgcacagactgcattcttgcccgcgacccg
tactgtgcctgggacacacacgctactacctgtattaacattttccagaagcaggataac
agacagcaccggaagtttattcagaacctgagaggagatgcaggtgaatgtccatcagcg
agaccacgctccatagacaggccccagcaggtggtggtgaagccgggcagttcggcggag
ctgttgtgcagcgtgcgctcaaacctggcgcaggttttctggaaggtcaacgatagcatc
ctgaccgagtcgggtcacttcctcctgatgggcgactcggggctgctcatctacagtgtg
gctccacagaaccagggccgctacgactgctggaccgtcgagtccgctgccgggaagaac
ttcacccggctggtggcctcctacaatctacagctggagcgtcccgaaatctcgcccgtg
tcctcagtcgagatcgtcaacatccccgatcctgattcatcctcatcccgcaccatcagc
accaccacggcaccgcgaggtaataacggcaacagtaacaccgcaggaccttctccacta
actccatctaccctgtccagtgtgcctccgcccccactaacccgccccgctaccacggct
aacgtctacggtgcaaaagcagaaactaaacattacgtccctcctcaaagtagcgattca
cgaaatcaaggacctgagatcaaggatcctcacgcaaagtacctccagtatgacaacagt
aatgcgctgctattcctcttcctgctcttcttcctccttttcctgttcggcctggggtat
aactgctacatgcagtaccttccaggtccgtgtctgaggctccgtgccgccgtgctcggc
tcgcagaagaagccgcagcgcgagtacacagcctgtgaggggggattgatggaagtgttg
ccggaaaaacgcgaccggaacgaaccgccacgccagaacggagcgctccgagacacagga
tacgaaacggaaccagagagcggaaatggcaaaattccatcgaatagctatgaagaggac
aacgatagcaccttgaagcaaggaccgtttgacataaactgcgaatcccaaccgatcgag
tacgcagacgccgatgcatcgtaa
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