Pangasianodon hypophthalmus (striped catfish): 113535546
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Entry
113535546 CDS
T05759
Symbol
zer1
Name
(RefSeq) LOW QUALITY PROTEIN: protein zer-1 homolog
KO
K10350
Zyg-11 protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113535546 (zer1)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
113535546 (zer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
ARM_ARMC5
BACK
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
113535546
NCBI-ProteinID:
XP_026784727
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MATKAGDDPESLMSLCTVFCLKNLRRTMCYTGERNKLCLRPDVFLPSEICDKLVNVYMEL
VHTDSEFEPQDGFFQLFCDPHSTRLSRLHLREDAVRDRDLEAIGKQDLMELHLTCCNHLS
SRSLRTLRNFRHTLVSLSLFGCSNIFFRKSSAEDDEDEDEDDDEEFCDGTDFSFQGFRRL
CMLNVGSLPGDVDPEALLKPLDTLRALDLSSTHLPRPAFLAQWREQLASLVLYNVDLNDE
LIATVLHMSRLRXGVXSFNQHNLLLVYCEMRSSVFYLFIYLFIYYAGYLILSMCLSLSLS
LSLSLSLSIEPCKSSIYPFQGLKRPLQFLGLYNTTLCNVTHIPAFKVTGSKNEEQVLNAI
EAYTEHRPELAHRAINQLFDFVRIQHCNNLVRAVQVHTHTHTHTHTYTHTGYTXDDIXEL
FSLKLLLNLSLQNVTRSVEVQRNCCLTLCNFNIPDELEFQYHRVNLLLLKILEPARQDES
IQRIAVHLCNALVCQVDNDHKEAVGKMGFVKTMLNLIQKKLHDRQCDQVMEFSWSALWNI
TDETPDNCQMFLNCSGMNLFLDCLKEFPDKQELHRNMLGLLGNVAEVKELRPQLLTSQFI
TVFSNLLGSKADGIEVSYNACGVLSHIMFDGPDVWTVENPNRETVMDKMWDAIQSWDVTS
RRNINYRSFEPILRLLPQSISPVSQHWATWALYNLVSVYPSKYCPLLVKEGGIALLKKVL
ELESSHQDTKTMARYTHTHTHTHRSDCMSNQKSFLRTYHFPVQSSSTSSSGSSSTPPHQL
TNKAPAPPITPV
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaagcgggggacgacccggagagcctcatgtccctgtgcaccgtgttctgt
ctgaagaacctcagaagaaccatgtgctacacgggcgagaggaacaaactgtgtctgcgt
cccgacgtcttcttacccagcgagatctgcgacaagctcgttaacgtgtacatggagctg
gtgcacacagacagcgagttcgagcctcaggacggtttctttcagctcttctgcgacccg
cacagcacgcgactgagccgcctgcacctcagagaggacgccgtacgagaccgagacctc
gaggccatcgggaaacaggatctgatggagcttcacctgacgtgctgtaatcacctgagc
tcccgaagcctccgcaccctgcgcaacttccgccacacgctcgtgtccctcagcctcttc
ggctgctccaacatcttcttccgcaagtcctccgctgaggacgacgaggacgaggacgag
gacgacgacgaggagttctgcgacggcaccgacttctcgttccagggcttcaggaggctg
tgcatgttgaacgtcggcagtctgccgggggacgtggaccctgaagctctgctgaagcct
ctggacaccctgcgagcgctggacctgtcctcgacacacctgcctcgccccgccttcctg
gcgcagtggagggagcagctggcctcgctcgtgctctacaacgtcgacctgaacgacgag
ctcatcgccaccgtcctgcacatgagccgactcaggtgaggagtttaatcatttaatcag
cacaatttactgttagtttattgtgaaatgaggtcatcagttttttatttatttatttat
ttatttatttattatgcaggttatttaattctgtccatgtgtctctctctctctctctct
ctctctctctctctctctctcagcatcgagccctgtaagagcagtatctatccgttccag
gggttgaagaggcctctgcagtttttgggtctttataacactacactgtgtaacgtcacg
cacatcccggcctttaaggtgacgggttctaagaatgaagaacaggtgctgaatgctatc
gaagcttacactgaacatcgtcctgagctagcacacagagccatcaaccagctgttcgac
ttcgtccggatacagcactgcaacaacctggtccgagcagtgcaggtacacacacacaca
cacacacacacacacacatacacacacacaggctacacatgagatgatatttaagagtta
ttctcgttgaagttgcttcttaacttgtctcttcaaaatgtgactcgaagtgtagaagtt
cagaggaactgctgtctgactctgtgtaatttcaatattcctgatgagttggagtttcag
tatcaccgcgtcaacctgctgctgctgaagatcctcgagccggcacgtcaggacgagtcc
atccagcgcatcgccgtgcacctgtgcaacgccctcgtctgccaggtggacaacgaccac
aaagaggccgtcggcaagatgggcttcgttaagaccatgttgaatttaatacagaagaag
ctgcatgacagacagtgtgatcaggtgatggagttctcatggagtgcgttgtggaacatc
acagacgaaacgccagacaactgccagatgttcctcaactgcagtggcatgaacctgttc
ctggattgcttaaaggagtttccagataaacaggagctgcaccgtaacatgctggggctg
ctgggtaacgtggctgaggtgaaggagctcagacctcagcttctcaccagccagttcatc
accgtcttcagtaacctgttggggagcaaggcggacgggatcgaggtgtcgtataacgcc
tgcggggttctgtcccacatcatgttcgacgggccggacgtgtggactgtggagaaccct
aaccgagagacggtcatggacaaaatgtgggacgccatccagagctgggacgtcacctcg
cgtcgcaacatcaactacaggtcgttcgagcctattctgcgtctcctccctcagagtata
tcacctgtcagtcagcactgggccacctgggctctttacaacctggtctctgtgtacccg
agcaaatactgtccattattagtaaaggaaggaggcattgcattgttgaagaaagttctc
gagctggagtcttctcaccaggacacaaagaccatggcacggtacacacacacacacaca
cacacacacagaagtgactgcatgtcaaatcagaagtcgttcctacgaacatatcacttc
ccagtccagtccagttccacttccagttccggatcttccagcactccacctcaccagctt
actaataaagcacctgctccaccaattaccccggtgtag
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integrated database retrieval system
