Pangasianodon hypophthalmus (striped catfish): 113535591
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Entry
113535591 CDS
T05759
Name
(RefSeq) interferon regulatory factor 1-like isoform X1
KO
K09444
interferon regulatory factor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
113535591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113535591
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
113535591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
113535591
NCBI-ProteinID:
XP_026784820
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MPVSRMRMRPWLEDMIDSNSVAGLVWVDKEKKMFSIPWKHAARHGWEMDKDACLFKQWAI
HTGKFKPGITEPDPKTWKANFRCAMNSLPDIEEVKDKSINKGCEAVRVYRMLHVVKNKNK
RSSKSQESRRRKKGRKMDADMASTEEHLYNHKQQDMITQENTIDSTESMNTASPTYDVPD
CSGYEVEIGPDSTNDIFTGRFHEFQVSPVHATDYEEKAIVEITRQLELDSSQWLQSNSSG
KGFLCNEVAMTESYHCPESQWSDTSGEELELRFYTELIPGLPSEDLLSYTDMSNSMPHTT
GLPQISCLL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtccagaatgcgcatgcggccctggttagaggatatgattgactcgaactca
gttgctggacttgtctgggtagataaggagaaaaagatgttctccattccttggaagcat
gctgctcgccatggatgggagatggacaaagatgcctgtctattcaaacagtgggcgatc
cacacaggcaaattcaagccaggaatcactgaacctgaccccaaaacatggaaagccaac
ttccgttgtgcaatgaactcactgccagatattgaagaagtgaaggacaaaagcatcaac
aaaggttgtgaagctgttcgtgtctaccgcatgcttcacgttgtcaagaacaagaacaag
aggtcatctaaaagccaggagagcaggaggaggaaaaaggggaggaagatggatgcagac
atggcatcaactgaagagcacctttataaccacaaacagcaagacatgatcactcaggaa
aacaccatagacagcactgaaagcatgaacacagcaagcccaacctacgatgtgcctgac
tgctcaggttatgaagtggaaatcggccctgatagcacaaacgatatcttcactggcagg
tttcacgagtttcaggtttctccagttcacgcgacagactatgaggaaaaagctattgtt
gagatcacacggcaattggagcttgatagttcacagtggctacaaagcaatagcagcgga
aaggggttcctgtgcaatgaagtagccatgacagaatcttatcactgtccagagagccaa
tggagtgatacttcaggagaggagcttgagctgcgtttttacacagaactgataccagga
ctgcccagtgaagatctcttaagctacacagatatgtcgaacagcatgcctcacacaact
ggccttccacaaatcagctgtctactctga
DBGET
integrated database retrieval system
