Pangasianodon hypophthalmus (striped catfish): 113535601
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Entry
113535601 CDS
T05759
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phyp03016
]
113535601 (pus1)
Enzymes [BR:
phyp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
113535601 (pus1)
Transfer RNA biogenesis [BR:
phyp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
113535601 (pus1)
Prokaryotic type
113535601 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
113535601
NCBI-ProteinID:
XP_026784840
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MLKFCQLVSVLSIQRLKSAGKPKAWCRIERFRGLCVQPRKMSEEENQNHSNMTKLKRAPE
STEVETEAKRLKTDEGKTDEEKRFPKRKVVLLMAYSGKGYYGMQRNPGNSQFKTIEDELV
TALIKAGCIPENHGDDMKKMSFQRCARTDKGVSAAGQVVSLKLWLIENILEKINTHLPPQ
IRVLGLKRVTGGFNSKNNCDARTYSYMLPTIAFSQKDTDQEDTSFRLDTETLQKVNKLFA
LYKGTHNFHNFTSQKGPRDPSAKRYITQMSCGEPFVRQGAEFAVITVRGQSFMMHQIRKM
IGLVIAVVKGYAQEEIIERSWGEEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHETLE
WQQEEDAIAAFKEAHIYPSIVETECQEKSMISWMSTLPIHDFTATATGKQERKDEDEDGN
ASD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaattctgtcaacttgtcagtgttttaagcattcagcgtttaaagtcagctggg
aaacccaaagcttggtgcaggatagaaaggtttcgtggactttgtgtgcagcccaggaag
atgtctgaggaagaaaatcagaatcacagcaacatgacaaagctgaaaagagctccagaa
agcactgaggtagagactgaagctaaaaggctgaaaacagacgaggggaagactgatgag
gagaaaagattcccaaaaagaaaagttgtcctcctcatggcctattcgggcaaaggatac
tatggaatgcagaggaatcctggaaattcccagtttaaaaccatcgaagatgaactggtc
actgcgctcatcaaagctgggtgtattcccgaaaatcacggagatgatatgaagaagatg
tctttccagagatgtgccaggactgacaagggtgtttctgcagccggccaggtcgtatct
ctaaagctgtggttgatcgagaacattctggaaaagatcaacacccaccttccaccacag
attagagttttaggtttgaagagagtcacaggcggctttaactccaaaaacaactgtgat
gccaggacctactcctacatgcttcccactattgcgttctctcaaaaagacactgaccaa
gaggacacgtcattccgcttggacacagagacacttcagaaggttaacaagctctttgcg
ctctacaaaggcacccataatttccacaacttcacatcacagaagggccctcgggacccg
agcgctaaacgctatatcacgcaaatgtcctgtggagaaccatttgtcaggcagggggcg
gagtttgccgtgatcacagtgcgaggccagagcttcatgatgcaccagatccggaagatg
attggattggtgatcgctgtagtgaaaggatacgcacaagaagagatcattgaaagaagc
tggggtgaagagaaggtcgacgtgcccaaggctcctgggctcggcctggtgttggagcgg
gtgcactttgaccggtacaacaagcgtttcgggggagacggtcttcatgagaccctggag
tggcagcaagaagaggacgctatagctgcctttaaggaagcacacatttacccgagtata
gtggagacggagtgtcaggagaagtctatgatcagctggatgagtacacttcctattcat
gattttaccgccacggcaaccggcaagcaagaacgcaaggatgaagatgaagatggaaat
gcttcagactga
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