Pangasianodon hypophthalmus (striped catfish): 113535660
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Entry
113535660 CDS
T05759
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113535660
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113535660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
CUE
ERCC3_RAD25_C
DEAD
NAPRTase_C
T2SSK
Motif
Other DBs
NCBI-GeneID:
113535660
NCBI-ProteinID:
XP_026784932
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MSLFNLERFRYQKEKTGGNVSSSSVSSPRQEQRRLVNNCSSDKENYPERRVKPDGRRGRG
KVPRHALEDVSSDDEACKKARGPTIHSSARKAKECEKQTNLEMEDKLNKLLEMFPQRNRS
ELLEVMESTSTLEGAVAYCLVTYKDKDISKTKGGATHSDDAEMQPKKRRKTVEPDSEPGS
EEENQEPSREKQEALVHKLKKKLPTMDKAVLREVLREHEWDFENALGSLLLFSSESDSSP
KEVEKTTSKPSSYSNPSKSSQESSGDGKQKPNSSSLTRWLSAVSSKSPSRPQSSSNRSAS
KESKTVSHKPERAKADKLKAVQNKDSDDSELDSEAEDGSDEFDLEGEDDSFDPGVQKQIL
QFFQEASMDELTLISGCSLKKAQKIISLRPFNTWKDVNEQFYKDNGLSMELVHGCKKVLK
ERQVLKQLMNKCESIARKMTKDVTRVIENGMGSMKQPTTLNSKLKLQPYQLIGLKWLILL
HQHNLSGILADEMGLGKTIQAISFLAHLYQKGIKGPHLITVPSSTVDNWVRELELWCPSL
KVIVYYGSVEDRKYLRHDILNNQVEFNVIVSTYNLTIGNESDRSLFRKLKLQCAVFDEGH
MLKNMNSLRYRHLMAINAEQRLLLTGTPLQNNLLELISLLNFIMPSMFSSSTSQISKMFS
TKSSEEESSFHKERIAQAKLIMKPFILRRVKSEVLKELPPKVEKIEMCPMSDAQQQLYDG
LFSRLKNTVNGEKRELSNVMMQLRKMANHPLLHRQYYTTEKLAAMSRAMLKEPTHFDADP
ALIQEDMEVMSDFELHKLCKEYSSISRFQLEKELLLDSGKFSLLTKLLAKLKEKGDRAVL
FSQFTMMLDIVEILLKHLGHQYVRLDGSTPMAERIGLIDKYNTDPEIFVFLLSTRAGGQG
INLASANVVILHDIDCNPFNDKQAEDRCHRMGQRRTVQVIKLISKDSIEACMLRLGQEKL
KLEQDMTTDEGEEGSMSEDVAELLKASLGL
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttaacctggaaaggttccgttatcagaaagagaagacgggtggaaatgtg
tcgtcgtcgtcggttagttcacccagacaagagcagcgcagactagtgaataactgcagc
tcggataaagagaattacccggaacgccgagtgaaaccggatggcagacgaggaagaggg
aaagtcccacgccatgcactggaggatgtgtcctctgatgatgaggcctgtaagaaggca
aggggtcctacaatacattcatcagcgaggaaagccaaagagtgtgaaaagcagacaaat
ctcgagatggaagataaactgaacaagctcctggaaatgttccctcagaggaacagaagt
gaattgctggaggtgatggagagtaccagcacgctggagggagctgtagcatattgtttg
gtgacctacaaagataaagatatatccaagacaaaaggcggagcaacacacagtgatgat
gctgagatgcagccaaagaagaggaggaaaaccgtggagccagattctgagccagggtcc
gaagaggagaaccaagagccaagcagagaaaagcaagaggctttggtgcacaaactaaaa
aagaaacttcctacaatggacaaagcggtactgagagaagttctgagagagcatgagtgg
gattttgaaaatgccttgggctctttgctcctgttttcatcagaatcagactctagccct
aaagaggtcgagaagacgacgtcaaaaccttcaagttattcaaacccatcaaagagcagc
caggagagcagtggagatgggaaacaaaagccaaattcttctagtctgacaagatggcta
tctgctgtatcgagtaaatctccttcaagaccacagtcctcctctaatagatcagcctca
aaagaaagcaaaacggtcagtcataagcctgagagagcaaaagcagataagttaaaagca
gtacaaaacaaagactcggatgactccgagcttgatagtgaggctgaggatgggtccgat
gaatttgacttggaaggtgaggacgatagctttgatcctggggtccagaagcagatcttg
cagtttttccaggaggcatcaatggatgaactgactttgatatctggctgctcgttgaaa
aaagcccagaagattatttcactgagaccattcaacacatggaaagatgtgaatgagcag
ttctataaggataatggcttgtctatggagttggtgcatggctgtaagaaggtgctgaag
gaaaggcaggtactgaagcagctcatgaacaagtgtgagagcatagccaggaagatgacc
aaagacgtaacccgggtcatagaaaacggcatgggctccatgaaacagccaaccaccctc
aacagcaagttgaaattacagccatatcagctgataggcttgaagtggcttattctctta
caccagcacaatctcagtgggatcctggctgatgagatgggcttaggaaagacgattcag
gccatttcttttctggctcatctttatcagaaggggattaaaggccctcacctcatcact
gtaccctcttccacagtggataactgggtaagggagctagagctgtggtgccccagcctg
aaggtgattgtttattatggctctgtagaggaccgtaaatacctccgtcatgatattctc
aacaaccaagtggagttcaatgttatagtgtctacatataacttaacaataggcaatgaa
agtgaccgcagtcttttccgcaagttaaagttgcagtgtgctgtgtttgatgagggtcac
atgttgaagaacatgaactcgctacgctaccgccatctcatggccattaatgctgaacag
agattgttgctcactggaacacctttacaaaacaacctactggaactcatatctctgctc
aactttattatgccttccatgttttccagcagtacttcacagatttccaagatgttctcc
acgaaatcatcagaagaggaaagtagtttccataaagaaagaatcgcacaagccaagctc
atcatgaagcccttcatcttgagacgagtcaagagtgaggtgctgaaagaactaccaccc
aaggtggagaagatcgaaatgtgtcccatgagtgatgctcaacagcagctctatgatggt
ctcttcagtaggctcaagaacactgtcaatggagagaagagagagctcagtaatgtgatg
atgcagctaagaaagatggccaatcatccactgttgcaccggcagtactataccacagag
aagctggcagccatgagccgagccatgctgaaggaaccaacacattttgatgcagaccct
gcactgatccaggaagacatggaggtgatgtcagactttgagctgcataagctttgtaag
gaatacagctccatctccaggtttcaactggaaaaagagctccttctggactctggaaag
ttttccctgcttaccaagttattagccaagctcaaagagaagggtgacagagcagtgctg
tttagccagttcaccatgatgctggacattgtggagattctgctgaaacaccttggtcac
cagtatgttcggctggatggctccacacctatggcagaaagaattggcctcatagacaaa
tataacacagaccctgaaatatttgtcttccttctgtcaacgcgtgctggtggccagggg
atcaacctggcctctgctaatgtagtgattcttcatgatatcgactgcaatcctttcaat
gataaacaagcagaggaccgctgtcatcgaatggggcagagaaggactgtgcaggttata
aaactgattagtaaagattccatagaggcctgcatgcttcgtttagggcaggagaaactc
aaacttgaacaagacatgactactgatgaaggtgaagagggctccatgtcagaggatgtg
gctgagctgttaaaagcatcactgggcctttaa
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integrated database retrieval system
