Pangasianodon hypophthalmus (striped catfish): 113535749
Help
Entry
113535749 CDS
T05759
Name
(RefSeq) lymphoid enhancer-binding factor 1-like
KO
K02620
transcription factor 7
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04310
Wnt signaling pathway
phyp04520
Adherens junction
phyp04916
Melanogenesis
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113535749
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113535749
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
113535749
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113535749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113535749
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
113535749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113535749
NCBI-ProteinID:
XP_026785062
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
SGGGDDLGANDEMIAFKDEGEQDEKIQENAFTERDLADLKSSLVNESEISQNSHPPVVRT
GQQEEQRVYEEKHREHLEHLDDVPKPQDGGMYKASAYSGYPFLMLPDPYHPNGQVSPSTN
KVAVVQQPHGMHPLTSLLPYSNEHFNPSPSHLTSDMSQKPGVHRHQPHDLPSFYSLPSGG
VGQITPSMGWQSQPVYPLSSCGFRQPYSSSLASNSSYSRFSHSLIMGTSGMHPTGIPHPA
IVPSSGRQEHDQFDIKPHTESKREREPKKPVIKKPLNAFMLYMKEMRAKVIAECTLKESA
AINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYGKKKRRKREKQQDSA
TDPGFPKKCRARFGLNQQMDWCDPCRRKKKCIRYLQGRQCASPNSSDGSAVDSPSSPINH
FTHLISPLNCPFPFPDASNVHTQTRKHPYPQHSALANSQFSSAERKQRAQSTLQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
agcggagggggagatgatctcggagccaacgacgaaatgattgccttcaaagatgaagga
gaacaagacgaaaaaattcaagagaacgcgtttacggagcgggacttggccgatctgaaa
tcgtcgttggtgaatgaatcggagatcagtcaaaactcgcacccgccggtggttagaaca
ggacagcaggaggagcagagagtgtacgaagagaaacacagggaacacctcgaacatctt
gacgacgtaccaaagcctcaagatggagggatgtacaaagcatcggcatattctggatac
cccttcctgatgttgccggatccctatcatcccaatggacaagtgtcaccatctactaac
aaagtggcagtggtgcagcagcctcatgggatgcacccacttacatcacttctgccatac
agcaatgaacacttcaaccccagcccttcacatctgacatcagatatgagccaaaaacca
ggtgttcacagacatcagcctcatgatctcccaagcttctattccctgccctcaggagga
gttggccaaataaccccatccatgggttggcaaagtcagcctgtctatccactctcctcg
tgtggcttcaggcagccctactcttccagtctcgccagcaactcctcctattccaggttc
tctcactctcttattatggggacatccggaatgcaccctacaggaatcccacaccctgct
atagtgccctcttcaggcaggcaagagcacgaccagtttgacattaagcctcatacagag
tcaaagagggagagagagcctaagaagccagtcatcaagaagcctctgaatgcctttatg
ctctatatgaaggagatgagggcaaaagtcatcgcagaatgcaccttgaaggagagtgct
gctatcaaccagatactgggccgcaggtggcatgctctgactcgtgaggaacaggctaaa
tattatgagcttgccaggaaagagcggcagcttcacatgcaactctacccaagctggtct
gcccgagacaactatggcaaaaagaagagaagaaaaagagaaaagcagcaagattctgcc
acagaccctggcttccctaagaaatgccgagctcgtttcggcctcaatcaacaaatggac
tggtgtgatccctgcaggagaaaaaagaagtgcattcgctaccttcaaggaagacagtgc
gccagccccaattcttccgatggaagtgctgtagattcaccctcctctcctattaatcac
ttcacacacctcatctctcctctaaactgcccctttccttttcctgatgcaagcaatgtc
catacgcagaccagaaaacacccttaccctcaacactcagccctagcgaactcccaattt
tcttcagcagagcgaaaacagagagcacaatccacacttcagtag
DBGET
integrated database retrieval system
