KEGG   Pangasianodon hypophthalmus (striped catfish): 113535848
Entry
113535848         CDS       T05759                                 
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113535848 (vps28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113535848 (vps28)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113535848 (vps28)
Membrane trafficking [BR:phyp04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    113535848 (vps28)
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113535848 (vps28)
  Exosomal proteins of other body fluids (saliva and urine)
   113535848 (vps28)
  Exosomal proteins of colorectal cancer cells
   113535848 (vps28)
  Exosomal proteins of bladder cancer cells
   113535848 (vps28)
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 113535848
NCBI-ProteinID: XP_026785177
LinkDB
Position
Unknown
AA seq 223 aa
MFHGIPASGGMGGAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTGACSRLLVQYKAAFKQVQASDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VNLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtttcatggaatacctgcttcaggagggatgggaggagctccagccaataagccggaa
ttatatgaggaagtgaagctgtataaaaatgccagggaacgggaaaagtatgacaacatg
gctgagctgtttgctgtggtaaagactctccaagccttagagaaagcgtacattaaggac
tgcgtgactcccaatgaatacacaggcgcctgctccagattgcttgtacagtacaaggct
gctttcaaacaggtccaggcatcagatgttggctcaatcgatgacttttgtaggaaatac
aggctcgactgtccactagcaatggagagaataaaagaagaccgcccaattaccataaag
gatgacaagggcaatttgaatcgctgcattgcggacattgtatctctcttcatcaccgtc
atggacaaactgaggctggagattcgagccatggatgagatccagccagaccttcgggag
ctgatggagacgatgaacagaatgagcaacatgccaccagattcagaggctaaagacaaa
gtcaatctttggctgactacgctgagcagcatgtctgcctctgatgagctggatgactca
caagttcgccagatgctttttgacctggagtctgcctacaatgccttcaatcggttctta
cactcgtcctaa

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