Pangasianodon hypophthalmus (striped catfish): 113535929
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Entry
113535929 CDS
T05759
Name
(RefSeq) deleted in malignant brain tumors 1 protein-like
KO
K06456
T-cell surface glycoprotein CD6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113535929
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
phyp04090
]
113535929
CD molecules [BR:
phyp04090
]
Proteins
113535929
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRCR
SRCR_2
DUF8622
Hepsin-SRCR
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
113535929
NCBI-ProteinID:
XP_026785317
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MEVFMILVVLQALVLCQAKLFINQASTSCSWAVTSAGENQSLAIFTQESLSPLAARICQA
LGCGKVHKLNKITAHGNASCLTGCSYHNNQLINCKKVHGTDCSMLSEVVCDAPYITPTNQ
LCVWNITSPTPESAVILTNESILRLSREICQNSSCGDVFEQNSSKAPPNSTCLTDCVYHN
SFFWNCSTVIRNDCSIISEVTCGNNKVRLSGGSHKCAGRVELWKAGQWGTVCDDEWDKQD
ADVVCAQLNCGYAISVNGQDGPYTQGKGPILMDELNCTGKERSLWECPAVREGHDCGHKE
DAGVVCSEYKALRLTGGRDHCSGRVEIHRNGSWGTVCEDCWDKQEASMACRMLGCGEATV
FTAFEEPFTHTNNTRWFYQCLKAHKTLWDCREIDATTHVLCEASKAAGVICKNSLGLPVP
TTPDVATAIVTTMQTTTEAPTVLWTPELLGCIILSCILLIAILSNIIMCCCSKRKRKALQ
VQQRFANLQTNTAVEENNYRDSIHLVKVTSNDINPAPTVPSQMWTQSSVESASYDTDYEV
NECGPNGAFTLSTFRNSMRYNADGQTPAMKAPNLQIVTEEGAAMLGHLQTPTDAFQRISA
TPSADSFDTSSTSSGECYENTGHNTAGLYPENYENLGEIRSDQQPGIPTVHVTEDFLNPT
VSGESMDPSGGEDSPIYSPVSADVEPFSNDADDSGDNDDYDDVNYTQTPLL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggaggttttcatgatcctcgtggtgcttcaggctctagtcctctgtcaagctaaactg
ttcataaaccaggcctccacatcgtgctcctgggctgtgacctctgcaggagaaaatcag
agtttggctattttcacacaggagtccctgtcaccacttgctgctcggatctgtcaggcc
ctcggctgcggtaaagtccacaagctaaataagatcactgcacatggaaatgcgagctgt
ctcacaggctgcagctaccacaataaccaactgatcaactgcaagaaggttcatgggaca
gactgcagcatgctatccgaggttgtttgtgatgctccttacataaccccaacaaatcaa
ctctgcgtctggaacataacatctccaacgcctgaatcagcagtcattctgaccaacgag
tccatcctcagattgtccagggaaatatgtcagaactccagctgtggagatgtgtttgaa
cagaacagctcaaaagcaccacccaacagtacttgtctaaccgactgcgtctaccacaac
tcctttttttggaactgttccacagtgatcagaaatgattgctcaataatttctgaagtc
acctgcggtaacaacaaagtcagattgtcaggaggtagccataagtgtgctggacgggtg
gagctgtggaaagctggacaatggggcacggtgtgtgacgatgagtgggataaacaggac
gcagatgtggtctgtgctcagctgaactgtggatatgcaatctctgttaatgggcaggat
ggcccctatacccagggtaaaggtcccattctcatggacgagctgaactgcacagggaag
gagaggagcctgtgggagtgtcctgcagtgagggaaggtcatgactgtggacataaagaa
gatgctggagtggtgtgttcagaatataaggctctgagactcactggtggacgggaccat
tgctcaggcagagtggaaatccatcggaatggttcgtggggtacggtgtgtgaagactgc
tgggacaagcaggaggcatccatggcttgccgcatgttgggctgtggggaagcaacagta
ttcacagccttcgaggaaccctttacccacacaaataatacacgttggttttaccaatgt
ttgaaagcacacaaaaccctgtgggattgtagagagatagatgcaactacacatgttctg
tgtgaagcctcaaaagctgcaggagtgatttgtaaaaactctcttggactgcctgtacct
accactccagatgtagctacggccatagtaacaacaatgcaaaccactacagaagcaccc
acagtgctctggactcctgaattactgggctgcattatactatcctgcattcttttgatt
gcaattctctcaaatatcatcatgtgttgctgttcaaaacggaaaagaaaagctcttcaa
gttcagcagagatttgctaatctacaaaccaacacagcagttgaagagaataactataga
gattctatccaccttgttaaagtcaccagcaatgacatcaaccccgccccaacagtgcca
tcacaaatgtggactcagagtagtgttgagagtgcttcctatgatacagactatgaagtc
aatgaatgtggcccaaatggtgctttcaccttgtccaccttccgcaactctatgcggtac
aatgcagatggtcaaactcctgctatgaaggccccaaatttgcagattgtgactgaggag
ggtgctgcaatgctaggacacctgcaaacccccacggatgcatttcagcgcatctctgca
actcccagtgctgactcatttgacacatccagtacctcatctggggagtgttatgaaaat
acaggccacaacacagcaggtctgtacccagagaattacgaaaatcttggagaaatcaga
agtgaccagcagcctggaattcccaccgtacatgtcaccgaggacttcctgaatccaaca
gtgtctggagagagtatggatccaagtggtggagaagattcccccatttactctcctgtg
agtgctgatgtagagcccttctcaaatgacgctgatgacagcggtgacaacgatgactat
gatgatgttaactacacacaaacaccactgttgtga
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