Pangasianodon hypophthalmus (striped catfish): 113535956
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Entry
113535956 CDS
T05759
Symbol
dennd3
Name
(RefSeq) DENN domain-containing protein 3 isoform X1
KO
K20162
DENN domain-containing protein 3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113535956 (dennd3)
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113535956 (dennd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_LRRK2
WD40
Beta-prop_EML_2
dDENN
uDENN
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
DUF5074
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
113535956
NCBI-ProteinID:
XP_026785371
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MANNIPLGLLEACVVVGASSDRLKELCLLQDGKEKEPLLLEAEVLQVHAPPFVTKENTSD
GQGHAPAFSRVQRRRSFLKKKKERPAVSSSNETKTTTDDQTVPKDIDLIALPQLCFPGGL
RVISESQEDSYHFLVFTDVFGNQTHGVVVQYYKPIQVSVDNIAYKNGHYLSKPPKLFTAY
GICLISKYPYYNALRDCLSSFLVQLKNCRMAEFEEQVKEFSAKLALVPIPPPGQLQVAFN
LKPLQIILPPREDMDRPVVDLDLHLPFLCFRPKQILQVICSILTEQRLVFFSSDWARLTL
MAECFMLFIHPLRWQHPFVPVLSRQMLDFLMAPTAFLMGCHVQHLEDVAAEADDLILIDI
DEGTVTSSSSAADLPDVPGAATECFKRRVEGLQIHYDLELCSHGSSMDVTDVRTRRRQWQ
RKLNSEILNISLELIVNIFREVHDHLNFEHRVFNSEEFFRAQEPADQPFYKKVLDTHIFH
SFLKDCLNKKMGAFAQMKLNTQSEAYRLRTMPESPRRPKQPDYQLRKRLGMSLPNLVEDF
SLTVPVRQLSFQKPNKGATFKPAFKIPPKPVKTFKLPEFPPPLAYHYVHNYYSDLISQLS
KAINSATPEDSSLLARYYYLRGLINSVAGKRLDALMDFQSLHRTDMDIFPLELVTTLADS
LRTEERKVAEGRPELKRLISRVKKSCSQDDYPDGGSVKKFELPRTHMFLDDFVRRVQESG
IVKDLGTIQRLFNALTVGMESTAKVSAQSVFYLDSSPDGQQKQVDPEVFRFFYTIWKETE
AEAQDVDLPAAVRDHLEANEQVYKLSSSVKTSHGVGKIAMTQRRLFLLTEGRPGYVEVTK
FRDIEEVKISSAPLLLLKIPSLKIKTSLRRETFEANLKSECDLWHLMIKELWAGRKMADE
HKDPQYIQQALTNALLMDAVVRCLQSQKAIYAASKLAYFDTMKREVPMMVPKTTSETLKH
KINPCLDLMSPQAVDILLYTPGQLGAAASDGGGYPKLWCALSDGKVVVFDAASWSLQQNC
IQVGTSRLNCMLGVDQQQLWIGSQDSIIYIINPNSMSCNKQLTEHRAEITGLALEERPDK
YSQLLAYSCSAEGTVIIWDVATLHVKRDIKLTCDRLQSIQILSGRLWCCARDCVLEVRRN
GTVHRRISLPDHLRGSQCSYSSFLVFDERSQMWTGCTAAGEVCVWHLADLEKPFQRIQLP
DCTSVICMIRVKNQIWVGGHSNSGGKARGKIYVLDTERLLVEKELLAHSDAVQTLCSAED
RYVLSGAAGQDGKIAIWKVE
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataacatcccattgggactgctggaggcttgtgttgttgtaggagcctccagt
gatcgtctgaaggagttatgcttgctgcaagatggtaaagagaaagagccgctgctgttg
gaggctgaggtgttgcaggtccatgccccaccttttgtgaccaaagaaaacacaagcgat
ggtcaaggtcacgccccagccttcagtcgggtccagaggagacgctcgttcttaaaaaag
aaaaaagaaagacctgctgtgtcttccagcaatgagaccaagaccacaacagatgatcag
accgtgcctaaagacatcgacctcattgccctgccccagctctgtttcccaggtgggttg
agagtcatcagtgagagtcaagaggactcttatcacttcctggttttcacagatgtcttt
gggaaccagacacatggagtggtggttcaatattacaaacccatacaggtatcggtggac
aatatagcatataaaaatgggcactatttatccaaaccaccaaagctgttcacagcctat
ggtatctgcctcatttccaaatacccttactacaatgctctcagagattgtctgtcctcg
ttcctggtccagctgaagaattgccggatggctgagttcgaagagcaggtgaaggaattc
tcagccaaattggcactggtccccatcccaccacctggacagctgcaagtggcatttaac
ctaaaacccctgcagatcattcttccacctagagaagacatggaccgtcctgttgtggac
ctggacctccatctaccctttctgtgctttcgacccaagcagatcttacaggtgatctgc
agtatcttgacagagcagcggcttgtgttcttctcctcggactgggccaggctcacgctg
atggctgagtgctttatgctgttcatacaccctctgcgctggcaacacccattcgttcct
gtcctctctcgtcagatgctggacttcctcatggctcccactgccttcctcatgggctgc
catgtccagcaccttgaggatgtggctgcggaggcagacgacttgatcctgattgacatt
gatgaaggaacagtgacatcatcatcaagtgctgcagacttgccagatgtgccaggggct
gccacagagtgtttcaagaggcgtgtagaggggctgcagattcactatgacctggagttg
tgcagccatggcagcagcatggatgtaactgacgtgcggactcgcaggcgccagtggcag
cgcaaactcaactcagaaatcctaaatatcagcctcgagctcattgtcaacatcttcaga
gaggttcatgaccacctaaactttgagcatcgagtattcaacagtgaggagtttttcagg
gcccaggaaccagcagaccagccattttacaagaaggtcttagacacacacatattccat
tctttcctaaaagattgtttaaataagaagatgggtgctttcgcacagatgaagctaaat
actcagtcagaagcttacaggctgaggaccatgccggagtctcctcggagacccaaacag
ccggattaccagttgcgtaagaggctgggtatgagtctgcctaacctggtagaggacttc
tctctgacagtaccggtgcgtcagctgtccttccagaaacctaacaagggagccacattc
aagccagctttcaagattcccccaaagccagtcaaaacattcaaactcccagaattccct
cctcctctggcctaccactatgttcataactattattcagacctcatcagtcaactcagc
aaggcaattaactctgcgacccccgaggactcgtccctgctggcgcgctactactaccta
cgcggactgataaattctgtggcaggaaaacggctagatgctcttatggacttccagagt
ctccacaggacagatatggacattttccctctggagctggtgactacgctggcagactca
ctaaggacagaagagcgcaaagtggctgaggggcggccagagctgaagcgcctcatcagc
cgagtgaagaaaagctgtagccaggatgactaccctgacggcggctcagtgaagaagttt
gagctcccgcgcacacacatgtttctggacgactttgtgcgccgtgtacaggagtcaggc
atcgtcaaagacctgggcaccatccagcgcctgtttaacgctctcactgtgggtatggag
tctacagcgaaggtctcagcccagtctgttttttaccttgattcctcaccagatggtcaa
cagaagcaggtggacccagaggttttccgcttcttctacaccatctggaaggagacagag
gctgaagcacaggatgtggatttgcctgcagctgtgcgtgaccacttggaggccaatgag
caggtgtacaagctctcctcatctgtgaagaccagccatggggtgggcaagatcgccatg
acccagcgccgactctttctgctcacagagggacgcccaggttatgttgaggtcaccaag
tttagagacatagaggaagtgaagatatcttcagctcctttacttcttctgaagatcccc
tctttgaagatcaagaccagcctgaggagggaaacgttcgaggctaatctgaaatccgag
tgtgatctgtggcacttgatgatcaaggagctctgggcaggaaggaaaatggcagatgag
cacaaggaccctcagtacatacagcaggctctgacgaatgccctgctgatggatgctgtg
gtcagatgcctccagtctcagaaagctatttacgctgcttctaaattggcctactttgac
acgatgaaacgggaagtaccgatgatggtgccaaaaacaacatctgagaccctgaagcat
aaaatcaacccttgtctggacttgatgtctcctcaagctgtggacatcctgctctatact
ccaggacagctgggcgcagcagcctcggacggcggtggttacccaaaactctggtgtgcg
ctgagtgatgggaaggtggtggtgtttgacgcagccagctggtccctgcagcagaactgc
attcaagtggggacctcccgcctcaattgcatgctgggagtggaccagcagcagttgtgg
attggttctcaggactcgatcatttatataatcaacccaaacagcatgtcctgcaataaa
cagctgacagagcaccgtgctgagatcaccggcctcgccctggaagaaaggcctgacaaa
tacagccagttgctggcgtactcgtgcagtgcagagggcacagtgatcatttgggacgtg
gccacgctgcacgtgaaacgtgacatcaaactgacctgtgacagactgcagtccattcag
atcctcagtggacgactatggtgctgtgcgcgggactgtgtgctggaggtacggcggaat
ggcacagtgcatcgtaggatatctcttcctgatcacctcaggggctcgcaatgttcctac
agcagcttcttagtctttgatgagaggagtcagatgtggaccggctgcacagccgcaggc
gaggtgtgtgtatggcaccttgctgacctggagaagcccttccagaggatccagctgcct
gactgcaccagtgtcatctgcatgatcagagtcaagaaccagatctgggtaggaggccac
agtaacagtggggggaaagctcgtggaaagatctacgtgctggacacagagcgcctccta
gtggagaaggagctgctggctcattcggacgcagttcagactctgtgctcagccgaggac
cgctacgttctcagcggtgctgctggccaggatggaaagatcgctatctggaaagtggaa
tag
DBGET
integrated database retrieval system
