Pangasianodon hypophthalmus (striped catfish): 113535979
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Entry
113535979 CDS
T05759
Symbol
sgce
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113535979 (sgce)
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Ortholog
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GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Het-C
Motif
Other DBs
NCBI-GeneID:
113535979
NCBI-ProteinID:
XP_026785418
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MVCVCVCVCVLPHFSLCVLLLSINAIACEGHSQIQALVDSTQKAVSHTGVVTIVSRSHAD
RNVYPSAGVLFVHVLEREYFKGEFPPYPKLGDTSNDPITFNTNLKGYPDRPGWLRYIQRT
AHSDGVLYGSPTAEHAGKPTIIEITAYNRRTFETARHNLVINIMGTEEFPLPYQAEFYIK
NMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINNLKEGVYVMVG
ADVPFSSCLREVESPQNQLRCSQEMEPVISCDKKFRAQFHIDWCKISLVDITKVIPVHNS
RPEPGTGVLPDVGDYNPPSESLKSKDYFADFLVTLAVPSAVALVLFVILGYSMCCRREGV
RKRNMQTPDIQLVHHSSIQKSTKELRSMSKNREISWPLSTLPVFNPVSGEVVPPIHPENY
ETTSMPLMQTQTNLQNQMQIPQQQPSGDNYSLSTFRRLEVNGIPEDRKVAEALNL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgtgtgtgtgtgtgtgtgtgtgttctccctcatttttcattgtgcgttctgctt
ttgtcaataaacgccatagcttgtgaaggccatagtcaaatccaggctttagtcgactct
acacagaaggctgtgtctcatacgggcgtggtcaccatcgtctctcgctcgcatgcggac
cggaacgtctacccttcagctggagtgctgtttgtccatgtcctggagagggaatacttt
aaaggggaatttcctccttatccaaagctaggggataccagcaatgacccaatcaccttt
aataccaacctgaagggttatccagacaggcccgggtggctgcgctacatccagcgaact
gcacacagtgatggagtcctttacggctcccccactgcggagcacgcgggcaaaccaacc
atcatcgagattactgcctataacagacgcactttcgaaacagcaaggcacaatttggtc
attaacatcatgggtacagaagaattccccttgccgtatcaggccgagttttacattaaa
aacatgaatgtagaggagatgctagccagtgaggtactgggagacttcctgggtgctgtg
aagaacgtctggcagcctgagaggctcaatgccattaacatcacttcagcgctagaccgg
ggtggacgtgtgcccctgcctatcaacaacctgaaagagggcgtgtatgtgatggtggga
gcagacgtgccgttctcatcatgcctgcgtgaggtggagagtcctcagaaccagctgcgc
tgcagtcaggagatggagccagtcatcagctgtgacaagaagttcagagctcaattccac
atcgactggtgcaaaatctctttggtggatattactaaagtcatccctgtgcacaacagc
cgtccggaaccgggcactggagtgctgccagacgtcggtgactacaatccgccctctgag
tcactgaaaagtaaagactattttgctgacttcctggtcacattggctgtgccgtctgct
gttgctctggttctcttcgtcatcctgggttattcgatgtgctgtcggcgagaaggagtg
cgaaaaagaaacatgcaaacaccagacatccagctggtgcaccacagctccattcagaag
tcaacaaaggagctgcgcagcatgtcaaagaacagggagatctcctggcctctctccacg
ctgcctgtgttcaaccctgtgagtggagaggtggtgccaccaatccacccagaaaactac
gagactaccagcatgccactcatgcagacccagacaaatcttcaaaatcaaatgcagata
ccacagcagcagccttcgggagataattacagtttgtcaacatttcgaaggctggaggta
aatggtattcctgaagacaggaaagtggctgaagcgctgaatttatga
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