Pangasianodon hypophthalmus (striped catfish): 113536037
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Entry
113536037 CDS
T05759
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
phyp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113536037 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113536037 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113536037 (nup153)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113536037 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
113536037
NCBI-ProteinID:
XP_026785520
LinkDB
All DBs
Position
Unknown
AA seq
1467 aa
AA seq
DB search
MAATGGGKIRTRRYHIVSKPYAKGQQQPGLISRVTDTVKSIVPSWLQKYFKNGEVAEGGD
THVQVEQNNVPTPPNGSQEAAPLPDGRNSPEPSTSNAEPSTSRASLNFQDVLSRPPLNRS
HLHFPSHDGSPALGGSLFSQPSTSTAPFPASPFAVSSSFSLVKEIKDSSSQHEDDNISTT
SGFSSRASDKDVPTSKTVPLLWSPETERTQSGSQLAHTSLKKPAFNLSVFGTSSSSAMNS
SVLNSSQLGDSPFYPGKTTYGGAAAAKMARSRAGTPYQAPVRRQIKAKPAGAQPCGVTSA
TARRILQSLERMSSPLADAKRIPSTVSSPLSPSVNHTDLDVSNFQSKRKKLEPAVPPVQK
LVIPAAAAVSGNRSMSFRPSLTPGSVSRVVEKGSKETPVRRSPQIPDAIPAATASTSSLS
YPLSSTPATSVTGAGGGKMKRERSVRPSTKRPDDEVAEVPNLPAVSLPISNFNLPTFSFS
SPPPASTLTPSTTPAPRISEQAAVSKETNAVSTPVSVSFTFSSPIVKATAASPLSFPPSS
GFTFSAPTMKTTTSMSNGKVAPAIVTLKKGSESSEEFGGPFKPAKALKQGSVLDILKGPG
FASPAQNSSETEPTKPTRSTTLHAPLTSLSGFGEKFKPAAGSWNCGTCLLQNKPSDKKCV
ACEAPQPSTDSSSKSDSKPAKAPAASLSSLFAPPAGSWECDTCMVQNKPEVVKCVACDTA
KPGTGVKPALTRPPVSEVSSTPPASSTPAAISTTTTTTSGLLSFADKFKKPEGAWDCDVC
MVQNKAQDVKCVACQTAKPGAAATPSSQASSSQPSASTPASTAPLLGFGDKFKKPEGSWE
CDVCCVQNKAEDQQCVACQSAKPGAKVETKGFGTQSSSTKSSSTTFKFGTSSSSNSTSGE
LKFGGTFSDSTPTMSFKFGNASSDATAPSGGFKFGGSSSESSSGEFKFGGASTEHTSTGP
SSTETFKFGVSSDGFKFGTAPTSESTSEEKKIETQNSGAGFKFGGSSAINFGSISTAAAP
AAASGGFAFGHSKPEEKAESNPSFSLSAPKAKAENEDPPPSTEAVSATANAAPVFGNPRR
AFRHEQTTVQLFLDETPQKTSTTTFMFGKTEEKKDTSTPSAGFLFNAAKEADKPAPSLGF
NFSKPDPPKELPKPTFTFGKSAEPTETPKPTFGFGQNATDNAAPKTAFAFMGSSSTTPAS
SSLAPSLFGTPSSSSLAPTPAPTSTFVFGQSSSSDAPSKTFMFGQQQETQAASAEPPAAP
NPAPPFVFGSVNSSNASPFSFGNAASTPASTAPAPSAAPSPFGFTATTSTSGFGSGQTSA
FGSSQSTVPAFGSAASSFTATASAAPAFGAKPSAPSVFGQQPNSTPAFGSSAASSGQGGF
QFGGATAFVGTGSNNSGIFTFGAGSGATASPAASPAMSAQPAAPGGGFSFSQPPAFNIGS
AKSSNATPTGQHGIAGRKIKTAVRRRK
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacaggaggagggaaaatcagaacaagacgatatcacatcgtttctaaacct
tatgccaagggccagcagcagcctggtttgatcagccgagtaacagacaccgtcaagagc
atagtcccctcttggctgcagaagtacttcaaaaacggtgaggtagctgaaggaggagat
actcatgtgcaggtggagcagaacaacgtacctactcctcccaatggcagtcaggaagca
gctccgctccccgatggacgcaactccccagaacccagcacaagtaatgcagagccctct
acaagcagagcgtcgctgaacttccaggacgttctctccagacctccactcaaccgctcc
cacctacatttcccttcccatgatggctcccctgcacttgggggctctctcttctcccag
ccctccacatctacggctccctttccagcaagcccctttgctgtaagctcaagcttctct
ttagtgaaggagatcaaggactccagctctcagcacgaggatgacaatatctccaccacg
agtggcttctcatcacgagcgtctgataaagatgtacccacctcaaagactgtaccactc
ctctggtcaccagagacagaacgcacacagtccggatcacagctggcccatacgagtctc
aagaagccagccttcaacctgtcagtctttggcacttcctcatcatcagcgatgaacagt
tcagtgctgaactcaagtcagctgggagactctcccttctatccagggaagactacgtat
ggcggcgctgcagctgccaagatggctcgttcacgggcgggcacaccttatcaggctcca
gtgaggagacagatcaaggccaaaccagcaggagctcagccttgtggagtgaccagcgcc
acagccagacgcatcctgcagtcattagagcgcatgtccagccctcttgctgatgcgaaa
agaatcccatctacagtttcttctcccttgtcaccatcagtgaatcacacagatctagat
gttagtaatttccagtctaagaggaaaaagctggaaccggctgtcccacctgtgcagaaa
ctggtgattccagctgctgcagctgtgtctggtaaccgctccatgtctttccgcccttcg
cttactcctggatctgtgagcagagtggtggaaaagggcagcaaggagacgcctgttaga
cggtcccctcagatcccagatgccattccagctgctacagcaagcacaagcagtctgtcg
tacccgttgtccagcacacctgccaccagcgtcacgggtgctggtgggggcaagatgaag
cgagagaggagtgtccgaccttccaccaaaagacccgacgatgaggttgctgaagtgccg
aacctgcctgctgtttctctgccaatcagcaacttcaatctgcccaccttcagtttctcc
tccccaccccctgcctcgacactcacccccagcaccacaccagcacctcgcatctctgag
caagcagccgtcagcaaggagacgaatgccgtgtctacgcctgtttctgtctcttttact
ttttcttcgcccattgtcaaggcaacagctgccagtccactgtcttttcctccatcatcg
ggatttaccttcagcgcgcctactatgaaaaccacaacttccatgtcaaatgggaaagtt
gctccagcaatagttacattaaaaaaaggcagcgaaagcagtgaggaatttggagggcct
ttcaaacctgctaaggccttgaagcagggtagtgttctggatatccttaaaggacctgga
tttgcttctccagcccagaactcctctgaaacagaacccacgaagccgacacgcagcaca
actctacatgcacccttgacttctctctctgggtttggggagaagtttaaacctgcagcg
ggatcatggaactgtggcacctgcctgctgcaaaacaaaccctcagacaaaaagtgtgtg
gcctgcgaggccccgcagcccagcacagactcttcctccaaatcggacagtaaacctgcg
aaagcccctgctgctagtcttagttctttgtttgcccctccagctggaagctgggaatgt
gacacctgtatggtgcagaacaagcctgaggtggttaaatgtgtagcgtgtgacacggcc
aagccagggactggagtaaaacctgccctgactcggcctcctgtctctgaggtctcttca
acaccccctgcttcttctaccccagccgccatttccaccaccactaccaccacgtctgga
ctgcttagttttgctgacaagtttaagaagccagagggcgcatgggattgcgacgtatgc
atggttcagaacaaagcacaggatgttaagtgtgtagcgtgtcagaccgctaaaccagga
gcagcggccacaccttcatcccaagcatcttcatcccagccttctgcatccacgccagca
agtactgcacctctattgggatttggagacaagttcaagaaacctgagggcagttgggag
tgtgatgtctgctgtgttcagaacaaggctgaggaccagcagtgtgtggcctgccaatca
gccaaaccaggcgctaaagtagaaaccaaaggttttggcactcagtcatccagcactaag
tcaagctcaactactttcaagtttggtacttcaagttcttcaaattcaacttctggtgaa
ctgaaattcggtggcactttttcagactccacccccacaatgtcctttaaatttggtaat
gcttcatcagatgccactgcaccttctggtgggttcaaatttggaggctcatcctcagaa
agttcttcaggagaattcaaatttggaggagcctccacagaacacacctcaacaggccca
agttcaaccgagactttcaaatttggtgtttcctcagatggctttaaatttggaacagct
cctacttctgaatcaacaagtgaagagaaaaagatcgaaactcaaaattctggtgctggt
tttaaatttggaggaagcagtgcaatcaattttggctccataagcactgctgctgctcct
gcagctgcatcagggggctttgcgtttgggcactcaaaacctgaagagaaagcagagtcc
aatccatcgttcagtttgtcagcacctaaagccaaagctgaaaatgaagaccctcctcct
tccacggaagctgtttcagccactgccaatgccgcccctgttttcggcaacccgcgacgg
gcatttcgccacgagcagaccacagttcaactgtttttagatgaaaccccacagaagact
tcaaccactactttcatgtttggtaaaacagaggagaaaaaggatacctcaacaccctca
gctggatttctgttcaatgcagccaaggaggctgacaaacctgcaccctccttgggcttc
aatttcagcaagccagaccctccaaaggaactccccaaacctacatttacatttggaaaa
tccgctgagcccacagaaaccccaaaaccgacattcggctttggacagaatgcaacagac
aatgcagcaccaaagactgcgtttgccttcatgggcagttcatctaccacccctgcatcc
tccagtcttgcacccagcctcttcgggactcccagcagttcgagcctggcccccactcct
gctccaaccagcacttttgtttttggccagagctcctcttcagatgcaccttccaagacc
ttcatgtttgggcagcagcaagaaacccaggcagcctcagcagaaccccctgccgctcct
aatccagcaccgccgttcgtcttcggctctgtgaatagttcgaacgcatcgcccttctcc
ttcggcaatgcagcctctacgccagcatctacagctcctgcaccctcagcagctccatct
ccatttgggtttactgccaccacgtccacctctggcttcggctctggacagacatcggca
ttcggctcctcgcagtccaccgttccagcttttggatcagctgcgtcctctttcacagcc
acggcatcagcagctcctgcctttggagcgaagcctagtgctccttctgtgtttggccag
cagcccaattcaacacccgcttttggatcgtctgctgcctcttctggccaaggaggcttc
cagtttggaggagccactgcttttgtgggaactgggagcaacaacagcggtatatttacc
tttggagcgggatccggagctacagccagccctgcagcatcaccggccatgtccgctcag
ccagcagcacctgggggaggcttcagcttctcacagcccccggccttcaatatcgggtca
gcaaagagttccaacgcaacaccaaccggacagcacggcatcgccggccgcaagatcaaa
accgctgtccggcgtaggaagtaa
DBGET
integrated database retrieval system
