Pangasianodon hypophthalmus (striped catfish): 113536050
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Entry
113536050 CDS
T05759
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00270
Cysteine and methionine metabolism
phyp01100
Metabolic pathways
Module
phyp_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
113536050 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113536050 (dnmt1)
03032 DNA replication proteins [BR:
phyp03032
]
113536050 (dnmt1)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113536050 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
phyp02048
]
113536050 (dnmt1)
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
113536050 (dnmt1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
113536050 (dnmt1)
DNA replication proteins [BR:
phyp03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
113536050 (dnmt1)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
113536050 (dnmt1)
Prokaryotic defense system [BR:
phyp02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
113536050 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
zf-CXXC
DMAP_binding
Motif
Other DBs
NCBI-GeneID:
113536050
NCBI-ProteinID:
XP_026785538
LinkDB
All DBs
Position
Unknown
AA seq
1507 aa
AA seq
DB search
MPTRTSLCLPEDVKERLQALDKGDDSLSDEDCVKEKLRLLQDFLRDDTQVQLKNLELKLK
NSELTTEVYTSEVKAVLKKALGLGKEGHGDGAEQNGHSNGFSENGSHKDNGEKEGAMETQ
EEGETMKSPSTSKGRGGRRSKADSEPKKSPASSRVTRNSGKQQTILSMFSRVPKRKSDEV
NGEATNGDTEVNTEEADVEETREEKRLKTEEDEKPTTENSNAEKTKPVNTAKTPPPKCPD
CRQYLDDSDLKFFQGDPDDALDEPEMLTDERLSLFDSNEDGFESYEDLPQHKITNFSVYD
KRGHLCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPINAWWITGFDGGEK
ALIGFTTAFADYILMEPSEEYSPIFALMQEKIYMSKIVVEFLQKNPDATYEDLLNKIETT
VPPAGLNFNRFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGVTLGK
RRAARRQAIRHPTKIEKDIKGPTKATTTKLVYQIFDAFFAEQIDQNNKEGGGLKRQRCGV
CEVCQAPDCGKCSSCKDMIKFGGSGRSKQACQKRRCPNMAVKEAEDDENIDEEDVLPLFK
DASKKMSQAKKKQTKNKITWVGEPIRTEGKRDYYMKVRVENEVLEVGDCVSVSPDDPSHA
LYLARITALWEEDEKMFHAHWFCRGTDTVLGESSDPLELFLVDECEDMQLSFVHGKVNVH
YKAPSEDWFMEGGLVDDIKVIEDDGKSFFYQLWYDGDFARFETPPKVIPDEDSKYKFCAS
CTRNKEQQEQEMPRAFDPLEDEESDTKVLYSLACLKGEQYRVGDGVYLPPEAFTFGVKAA
SPVKRPHRKEDVDEDLYPEYYRKSSDYIKGSNLDAPEPFRIGRIKEIYCTKRSNGKPDES
EVKLRIYKFYRPENTHKGPKAGYHTDINQLYWSDEEVSVNMADVLGHCRVEYGEDLVESV
QEYSSGGTDRFYFLEAYCARSKTFEDPPNHARSVVNKGKGKGKGKGKGKGKASSQDTQEQ
ETLELKVHKLRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPGTTVFTE
DCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVV
SYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQT
RRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVDDKKYVSNVTRGNGGIYRTITVRD
TMSDLPEIRNGASALEISYNGEPQSWFQRHIRGAQYQPILRDHICKDMSALVEARMRHIP
LAPGSDWRDLPNIEVRLRDGTTTKKLRYTHSDKKNGRSSTGALRGVCTCAGGKPCDPADR
QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV
RECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSKAIGLEIKKCIQEKMKLNATEPVKQ
EKMDVCE
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccaggacctcgctgtgtttgccggaggatgtgaaagaacgactgcaggcgctg
gataaaggtgatgacagtttgtcagatgaggattgtgtgaaggagaagctcaggttactg
caggacttcctgcgtgatgacactcaggtccaactcaaaaaccttgagctcaagctgaaa
aactctgaacttaccacggaggtgtacacgtccgaagtgaaagctgtgctgaagaaggct
ttaggtttgggcaaggaaggtcacggcgatggggcggagcagaacgggcactcgaatggc
ttctctgaaaatggatctcataaagataatggtgaaaaagaaggagccatggaaactcag
gaggaaggagaaaccatgaaatctcccagcacatcaaagggcaggggtggcagacgcagt
aaagcagactctgagcctaaaaaatctcctgcaagctcaagggtcacacgcaattctgga
aaacaacaaacgatcctgtcaatgttctcaagagtacccaagcgcaagtctgatgaggtg
aatggcgaagctacaaatggtgatacagaggttaacactgaggaagctgatgttgaggag
acccgtgaagaaaaacgtctcaaaacggaagaggatgaaaaaccgaccactgaaaactcc
aatgctgagaagaccaagcctgtgaacacagccaagacacctccacccaagtgtcctgac
tgcaggcagtacctggacgactctgacctcaagtttttccaaggagatcctgatgatgcg
cttgatgaaccagagatgttaacagatgagcgtctttcattgttcgactcgaatgaagat
gggtttgaaagttatgaagacttgcctcaacacaagattacaaactttagcgtctatgac
aaacgtggccacctgtgtccatttgattctggactcatcgagaagaacgttgagttgtac
ttcagttgtgcggtcaagcccatctatgatgacaatccctgtatggatggtggtgtacct
gccaaaaagctgggaccaatcaatgcctggtggatcactggctttgatggaggagagaaa
gctctgattggcttcaccacagcgtttgctgactacatcctaatggagccgagtgaggaa
tactctccaatctttgccctgatgcaggagaagatctacatgagtaagattgtggtcgag
tttcttcagaagaacccagatgctacatatgaggacctgcttaacaaaattgagaccaca
gtccctccggctgggctgaacttcaatcgcttcaccgaagacactctcctgcgtcatgcc
cagtttgttgtggagcaggtggagagctacgatgaggccggagactcagacgaacagccc
atcattgttaccccgtgcatgagggacctaatcaaactggctggagtcactctgggcaag
aggagagcagccagaagacaagctattcgtcatcctacaaagatcgagaaggatatcaag
ggtccgacaaaagctaccacaacgaagcttgtgtatcagattttcgatgccttctttgca
gagcagattgatcagaataataaagagggaggaggacttaagaggcagcgctgtggggtc
tgtgaggtgtgccaagcccctgattgtggtaaatgttcttcatgtaaggacatgatcaaa
tttggaggcagtggtcgcagcaagcaggcctgtcaaaagaggagatgtcccaacatggca
gtgaaggaagcagaggatgatgagaatatagacgaggaagacgtcttgccgctctttaaa
gatgcatcaaagaagatgtctcaagctaagaaaaagcagaccaagaacaaaatcacctgg
gtgggagaacccattaggactgaaggaaaacgcgactactatatgaaggtgcgtgtggaa
aatgaggtgctggaagtcggagattgtgtgtccgtcagcccagatgacccctctcatgca
ctctacctcgccaggattacagctttgtgggaggaggatgagaagatgtttcatgcgcac
tggttctgccgtggcacagacaccgttcttggcgagtcctcggaccctctggagctcttc
cttgtggatgagtgtgaggacatgcagctgagtttcgtgcacggcaaagtcaatgtgcac
tacaaggctccttcagaggactggttcatggagggtggtcttgttgatgacataaaggtc
attgaggatgacggaaaaagcttcttttatcaactatggtacgacggagattttgctcgg
tttgagacaccacccaaggtcatcccagacgaagactccaaatacaagttctgtgccagc
tgcactagaaataaagagcagcaggaacaggagatgcctcgtgccttcgatcccctggag
gatgaagagagtgacactaaagtcttgtattccttggcttgcctgaagggggagcaatac
agagtgggagatggcgtatacttgccgcctgaggctttcacatttggggtgaaagctgca
agcccagtgaaacgtcctcaccggaaagaggatgtggatgaggacctttatccagaatac
tacaggaagtcctcagactacatcaagggatccaatctggatgctccagagccattccgt
atcggacgcattaaagagatctattgcaccaagcgcagcaatggcaagccagatgaatca
gaggtcaaactgcgcatctacaaattctacagaccagagaacactcacaaggggccgaag
gctggctaccacactgatataaaccagctttactggagtgatgaagaggtgtctgtgaac
atggcagatgtactgggtcactgtcgtgtggagtacggggaggacctggtggagagtgtg
caagagtactccagtggtggaacggatcggttctacttcctagaggcctactgtgccaga
tcaaaaacctttgaagacccaccaaaccatgctcgctctgttgtaaacaagggcaaagga
aaaggaaagggaaaaggtaaagggaaaggaaaagcttcctcacaggatacccaagagcag
gagactctagagctcaaagtccataagctgcgcacactggatgtgttctccggctgtggt
ggtctgtcagaaggcttccaccaagcaggtatctctgagacccactgggccattgagatg
tgggatcctgctgcacaggccttcaggctgaataacccaggcaccacagtgttcacagag
gactgcaatgttctgctgaagctggtaatgtctggagagaagaccaactctctcggccag
aaactcccacagaagggagatgttgagatgctgtgtggagggccgccgtgccaaggcttc
agtggaatgaaccgcttcaactcacgcacttactccaagtttaagaactcccttgttgtt
tcttatctgagttactgtgactactacaggccaaagttcttcctgttggaaaacgtccga
aactttgtgtcctttaagcgctccatggtcttgaaactcactctgcgttgcctagtgcgc
atgggctaccagtgcacgtttggtgtactccaagcggggcagtacggagtggcccagaca
cggcgcagggcaattatactggctgctgctccgggtgagaaactcccacgctacccagaa
ccactgcacgtgtttgctccaagagcatgctccctcagtgtagtggttgatgacaaaaaa
tacgtctccaacgtaactagagggaatggcggtatctatcgaaccattacagtccgggac
accatgtctgacctcccagagatccgtaacggagcctctgctctagagatttcttacaac
ggcgagccacaatcctggttccagagacacattcggggtgcacaataccagcccattctc
agggaccatatctgcaaggacatgagcgccctggtggaagcgcgcatgcgtcacatcccc
ctagcaccaggctctgactggagagacctgcccaacatcgaggtgcgactacgggacgga
accacaacaaagaagcttcggtacacacactcggacaagaaaaacggccgaagtagcact
ggtgcgctgagaggagtgtgtacttgtgctggaggtaaaccatgtgacccagcagacagg
cagttcaacacactgatcccgtggtgtttgcctcacacgggtaatcgtcataaccactgg
gccggactatatggcaggctggagtgggacggattcttcagcaccaccgttaccaaccct
gagcccatgggcaagcaggggcgtgtgctacatccggaacagcaccgcgtggtcagtgtt
agagaatgtgctcgctcgcaaggtttccccgatacgtaccgcttcttcggcaatatcctg
gacaaacacagacaggttggaaacgcagtgcctccacctctttccaaagccattggactt
gaaatcaagaagtgcattcaggagaagatgaagcttaatgctacagagcctgtgaaacag
gagaagatggatgtgtgtgagtag
DBGET
integrated database retrieval system
