Pangasianodon hypophthalmus (striped catfish): 113536076
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Entry
113536076 CDS
T05759
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113536076 (snx13)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
113536076 (snx13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
113536076
NCBI-ProteinID:
XP_026785601
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MGNLVTVTSYRASDGTWDYVCLHPCLQCDPFGALFNLGQASLSIWGWWGLGILLFLITFG
PFAIFYLAFYIFCFLGGGFAVTLLFGKTNSEKHLEKCEHSYLPPTPTGIAKTLEELKQET
KPIKIDRRLTGSNFIDEPLQQVIQFALRDYIQYWYYTLSEDESFLLEIRQTVQNALVQFS
TRSKEVDWQPYFTTRLVDDFATHLRVFRKAQERLNEREEPKQREAPEELLDAFFETEVEL
ERKICRDVVCTSHKDEEGFLRDLCEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLIN
QLSDPDYINQFIIWMIRDSSCNYEAFMNILKLTDKPAELEAVKDKVLEELQYLRSLDTAG
DDINTIKNQINSLLFVKKVCETRIQRLQSGKEVDAVKLAANFGKLCIIPLDHILVHNIAL
QFFMDYMQQVGGQADLFFWLTVEGYRVTAQQQLEVLLSWQKDGRKQSGQTKGLLKAAALG
VYEQYLSEKASPRVQVDQASVDRLAEKLNKEDPTPEIFDDIQRKVYDMMLKDERFYPSFK
QHPLYVRMLAELDMLKEPSYRGSDDGDAESFNGSPTGSINLSLDDLANATTDESVQLHAF
ISDTGVCNDHGKTYALYAITVFRKNPDGSEDAWKTYRRYSDFHDFHMRITEQFENLNSIL
KLPGKKTFNNMDRDFLERRKKDLNAYLQLLLNPEMVKACPMLIPYVHDFLENKAYSKGKG
DFARKMDTFVNPLRSSMRNMSNAVKSLPDSLAEGMTKVSDNMGRMSERLGQDIRQSIFKV
PPLIPKSDIDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQ
LIRATYGDTINRKIVDHVDFMTSPEQVADYVKRFRDSYWPNGILAETPPRRDKSIRMRTR
VAAKTNLLGIMPDELKHIIGAETTRKGILRVFEMFQHQQLNRRLVYVFLEGFLETMFPQY
KFPELFIKLHSRSPRIRTYSQKVRTLQKR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggggaacctggttactgtgacctcctacagagcctcagatggaacctgggattatgtt
tgtctgcacccgtgtctacagtgtgacccatttggagccttattcaatctgggacaggcc
agtctgtccatctggggatggtggggcctgggaatcctgcttttcctcatcacgttcgga
ccctttgccatattttatttggcgttttatatcttctgttttcttggcgggggcttcgct
gtcacgcttttatttggaaagacgaattctgaaaaacacctagagaaatgtgaacactct
tacctgccccccaccccaacaggcatagcaaagactttagaggagctgaagcaggagacg
aagcccataaaaatcgaccggcgtctgacgggatccaacttcatcgacgagcctctgcaa
caggtgattcagtttgctctgagggactacatccagtactggtattacacgctgagtgag
gatgagtccttcctgctggagatcagacagacggtgcagaacgctctcgtgcagttctcc
acgcggtccaaagaggtggactggcagccttatttcaccaccagactggtggatgacttc
gccactcatctccgtgttttcagaaaggcccaggagaggctgaacgagagggaggagcct
aaacaacgtgaagccccagaggagctgctggatgcgttttttgagactgaggtggagctg
gagaggaagatctgcagagatgtagtgtgcacctcccataaagatgaagaagggttcctg
cgggatctgtgtgaggtgctgctgtatctcttactacctcctggagacttccacaacaag
aacatgagatacttcctcagggaaattttggcgagaggagttctgctgccattgattaac
caactaagtgatcctgattatatcaatcagtttatcatctggatgatccgagactccagc
tgcaactatgaagccttcatgaacatcctgaagctgaccgacaagccagccgagctggag
gctgtcaaagacaaagtgctggaggagctccagtacctgcgctcgctagataccgcagga
gatgatataaacactataaagaatcagattaacagtttactgtttgtgaaaaaagtctgt
gaaacaagaatacaaaggctacaatcaggaaaggaagttgatgctgtgaagctagcggca
aattttggcaaattgtgtataatcccactggatcatatcctggtgcacaacatagcactt
cagttttttatggactacatgcagcaggtggggggtcaggcggatctgttcttctggctg
acggtcgagggataccgggtgacggcacagcagcagctcgaggttctactgagctggcag
aaggacggcaggaagcagagcgggcagaccaagggcctgttaaaagccgctgcgctcggt
gtctatgagcagtacctctcagagaaggcatctcccagagtgcaagtggatcaggcctct
gtggacagactggctgagaaactcaacaaagaggatccgaccccggagattttcgatgac
atccagagaaaggtgtatgatatgatgttgaaggacgaacggttctacccgtcatttaag
cagcaccctctgtacgtgcgcatgctggccgagttggacatgctgaaggagccgagctac
cggggatcagacgatggagacgcagagtcttttaatggatctccaactggaagcattaat
ttgtctttggatgacctcgcgaacgccaccacagatgagtctgtgcaactacatgctttt
atttctgatactggcgtgtgtaatgaccacgggaagacctacgcactctacgccatcacc
gtcttccgtaagaacccagacggtagtgaggacgcctggaagacctaccgccgctatagc
gacttccacgacttccacatgcgcatcactgaacagtttgagaacctcaactcgatatta
aaacttcctgggaagaaaacgttcaacaacatggacagggacttcctggagagaaggaaa
aaggacctgaatgcttatttgcagctgcttctgaatccagagatggtgaaagcctgtccc
atgctgataccttacgtccatgactttctggaaaacaaggcatacagcaaaggcaagggc
gactttgcacgaaagatggacacctttgtgaaccctctgcgtagctccatgaggaacatg
tcaaatgctgtcaagtcacttcctgacagccttgctgaaggaatgaccaaagtgtcggac
aacatggggcgcatgtccgagagactgggccaggacatccgacagtccatattcaaggtg
ccgcccttaattccaaagtcagacatcgaccctgagcactgccgagtgtctgctcagctg
gatgataatgtggacgataacatcccactgcgtgtgatgctgctgctgatggatgaggtg
tttgacctgaaggagaggaaccagtggctccgcaggaacatcaagaaccttctacagcag
ctcattagagccacgtacggagacaccatcaacaggaaaattgtggatcatgtagacttc
atgacgtctccagaacaagtagctgactacgtcaagaggtttagagattcctactggccg
aatggaatcctagcagagacgccaccacgccgagacaagagcatccgcatgagaacgaga
gtagcagctaagactaacctcctgggcatcatgccagacgagctgaagcacatcatcggg
gcggaaaccacacgcaagggcatcctccgggtctttgaaatgttccagcaccagcagctg
aaccgccgcctggtctacgtcttcctggaggggtttctagaaaccatgttccctcagtac
aagttccccgagctgttcatcaagctgcactcacgctcgccccgcatccgcacttattca
cagaaagtccgcaccttacagaagaggtga
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