Pangasianodon hypophthalmus (striped catfish): 113536090
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Entry
113536090 CDS
T05759
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113536090 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113536090 (clasp2)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
113536090 (clasp2)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
113536090 (clasp2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT_GCN1
HEAT
TOR1L1_N
HEAT_EZ
Cnd1
HEAT_MROH2B_C
HEAT_2
TPR_DNAAF5
PIK3R4-like_middle
Ltn1_1st
HEAT_DAAF5
MMS19_C
Dopey_N
ParcG
PDS5
TAN
ARM_TBCD_2nd
UTP20
Tra1_ring
Motif
Other DBs
NCBI-GeneID:
113536090
NCBI-ProteinID:
XP_026785632
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MEENDNMDYFYQQVLQKDVSRRLQVGPDLIDYLSDPQRSSDVEQDKPRLDKTIDELTGWV
NSSNYKVALLGIDIVSAFVDRMSDRFRGYVGTVVPALVDRLGDGKDQVRDQAQMLILKLM
EEAATPMYVWERLFPAFKHKNFRSREGLCLCLVATLNAYGAQPLSLSKFVPHLCTLTGDQ
NPQVRETAITALVEVYRHVGERVRADLGKRGLPAARLQTILGRFDEVLNSGNMALSLSQD
RSFDDDDSVDGSRPSSAQAAFKVPKVPKKPADSASSSRRPSATGATKMSVSKEGAGAVDE
EDFIKAFTDVPTVQIYSTRDLEDNLNKIREILSDDKHDWDQRTNALKKIRSLLVAGAKNH
DCFYQHLRVLDGAFKLSAKDLRSQVVREACITVAHLSTVLGNRFDHGAEAIVPVLFNLIP
NCAKIMATSGTAAIRIIIRHTHVPRLIPLITGNCTSKSVAVRRRCYEFLDLLLQEWQTHS
LERHAAVLVDSIKKGIRDADSEARVEARKAYWGLRSHFPTEAESLYNSLESSYQKTLQSC
LKSSGSVASLPQSDRSSSSSQESLNRPLPSKWSAAPGRVPASSKSSGSPVSLQRSRSDVD
VNAAASAKARHSGQAGGAGRLTTALPPGTYASLDDASDKDGRLRAKQPLSTPSGMSSSQV
DSRARSRTKMVSQSQRSDDSDCTPGSQSATPFGAGSRSGSPGRVLTSTALSTLSTGAQRV
SAAPGSQRRSRIPRSQGCSRDSSPTRLSVAPSNISHVYNGSKGARGSRIPRPSVSQGCSR
EASRESSRDTSPVRSFTPLASRHYSRSTGALHAPDAFGAAGSGLGISQSSRLSSSVSAMR
VLNTGSDVEEALADALLLGDMRSKQKKPARRRYETYGMYSDDDANSDASSACSERSYSSR
NGSIPTYMRQAEDVAEVLNRCASANWSERKEGLMGLQALLKNQRALSRVELKRLCEIFTR
MFADPHSKRESRGFGTAESGISSASFKRVFSMFLETLVDFIMVHKADLQDWLFVLLTQLL
KKMGADLLGSVQAKVQKALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIET
LTLQMEPQDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLIALFQLNTPEFTMLLGA
LPKTFQDGATKLLQNHLRSTGGVAPAPVGSPLTRHTPRSPASWSSPLTSPTNTSQNTPSP
SAFDYDTENMNSEEIYSSLRGVTQAIQNFSVRSQEDMTEPPRKREGDGEEGGAETTDTGR
TALDNKTSLLNTMPLLSSSPRPSKEYQPGSYSDSSFGSSPFSKSLKDVLDQDGEGLTDDS
SVDQSEVVAELLKELSNHSERVEERKAALCELMRLIRETQLHVWDEHFKTILLLLLETLG
DGEHVIRALALRVLKEILNRQPWRFKNYAELTIMKTLEAHKDPHKEVIRAAEEAAAMLAS
SISPEQCIKVLCPIIQSADYPINLAAIKMLTKVIERLPKESLLQMLQEIVPGLIQGYDNS
ESSVRKACVFCLVAIYAIIGEDLKPYLSQLSGSKLKLLNLYIKRAQSGSSGSDQSSDVGG
QGL
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaatgacaacatggactatttttaccagcaagttttgcagaaggatgtgagc
cggcggctgcaggtcggtcccgacctcatcgactacctgagcgacccgcagcgatcctcg
gacgtggagcaggacaaacctcgcctggataaaaccatagacgagctcacgggctgggtc
aactccagcaattacaaggttgccttgctggggatcgatattgtcagtgcgtttgtcgac
cggatgagcgatcgctttcgaggttatgtaggcacagtggtccctgcattagtggatcgt
ctgggtgatgggaaagatcaggtacgagatcaggcacagatgctcattctcaagctgatg
gaagaggcagccactcccatgtatgtttgggagaggttattccctgccttcaaacacaag
aacttccgaagcagagaaggactgtgtctgtgcctggtcgccacactcaacgcgtacggt
gcccagccattgagtctgagtaaatttgtaccgcatctgtgtacactaacaggagaccag
aaccctcaagtacgggagaccgccataacagctctggttgaggtgtatcggcatgtaggc
gagcgagtgagggcagacctgggcaagagaggactgccagctgcacgattgcagaccatt
ttaggccgatttgatgaagtgctgaattctggaaatatggctctcagcctgagtcaagat
cgtagctttgatgacgatgactcggtggatggtagccggccctcgtcagcccaggcagct
ttcaaagtccccaaagtgccgaagaaacctgcagattcagccagcagctccagaagaccc
agtgctactggagccaccaaaatgagtgtgtctaaagagggagcaggagctgtagatgag
gaggacttcattaaagcattcacagatgtccccactgttcagatctactccacacgtgat
ctggaggataatctgaacaagatacgagagattctctctgatgataaacacgactgggat
cagagaactaatgcattgaagaagatccgatctctgctggtcgcaggagcaaagaaccac
gactgtttctaccagcacctgcgtgttctggacggagcgtttaagctttcagctaaagac
ctgcgatcgcaggtggtgcgagaggcgtgcatcactgtggcgcacctgtccacagtgttg
gggaatagatttgaccatggagcagaggccatcgttcctgtgttgtttaatcttattccc
aactgtgcaaaaataatggcgacctctggcacagcagcaattcgcatcattatacggcat
acacacgtgccgcggctgattcctctcatcacgggaaactgcacttcaaaatctgtggct
gtaaggagacgctgttatgagttcctggatctgctactgcaggagtggcagacacactct
ctggagaggcatgcagcagttttggtggacagcattaagaagggaatcagagatgctgac
tcagaggctcgagtggaggccagaaaggcctactgggggctgcggtctcacttccccacg
gaggcggagtctctgtataactcgttagaatcgtcgtatcagaagacgcttcagtcgtgt
ctaaagagctcgggcagcgtggcatcactcccacaatcggatcgctcctcctccagctca
caggaaagtctcaatcggccgttgccttcgaaatggtcagctgctccaggcagagttcca
gccagctccaagtcatcaggctcaccagtttccctgcagcgatctcggagtgatgtggat
gtaaatgcagcagccagtgctaaggccagacatagtggacaggcaggaggagccggccga
cttactacggctttacccccaggcacctatgcctcactagatgatgcctctgataaggat
ggccgactacgtgctaagcagccattgtcaactccatcaggaatgagcagcagtcaggtg
gactcaagggcccggagccgaacaaagatggtatctcagtcccagcgttccgacgattct
gattgcacgccaggatcacagtctgctacaccttttggtgcgggttctcgctctggctct
ccaggccgtgtgttgaccagcacagctttgagcacactcagtacaggcgcccagcgggtg
agtgctgctccaggctcccagcggcgcagcagaatcccacgcagtcagggctgcagccga
gattcaagccccacccgcctgtccgtggcgccatccaacatcagccacgtctacaatgga
tcgaaaggagcacggggtagtcgtataccgcggcctagtgtgagtcagggctgcagtcgt
gaggccagtcgagagagcagcagagacaccagccctgtgcgctccttcacgccgcttgct
tcacgacactactctcgctctactggtgctcttcatgctccagatgcctttggggcagca
ggttcgggtttggggatctctcagtccagtcgtctctcttcctctgtcagtgccatgaga
gtgttaaatacggggtcagacgtagaggaggccctcgctgatgcactgctgttaggagat
atgcggagcaagcagaagaaaccagctcggcggcggtacgagacctacggcatgtattct
gatgacgatgccaacagcgatgcatcaagtgcttgctcagagcgttcatatagctcacgc
aatggcagtattcccacgtacatgcgtcaggcggaggatgtggccgaagtgcttaaccgc
tgtgcctcggccaactggtccgagaggaaagaggggctgatgggattacaggctctgcta
aagaaccagcgtgctctcagccgagttgagctcaagaggttgtgtgagatttttaccagg
atgtttgcagaccctcacagcaagcgtgagtccagaggcttcggcacggcagaatccggt
atcagttccgcctcctttaagagagtgtttagcatgttcttggagacactggtggacttc
ataatggttcataaggcagatctgcaggactggctgtttgtgctgcttacacagctacta
aagaagatgggcgctgacctcctcggctctgtacaggccaaagtacagaaagccctcgac
gtcacaagggagtcttttcctaatgatctgcagttcacaattctcatgagattcaccgta
gaccagacacagacacccaacttaaaggtgaaggtggccattttgaagtacatagagacc
ctgacgctacaaatggagccacaggactttgtgaactccagcgagaccagacttgcagtc
tcccgcatcatcacatggaccacggaacccaagagctctgacgtcaggaaggcagcccag
tctgtgctgattgcgctgttccagttgaatacaccagagttcaccatgcttcttggtgca
ctacctaaaaccttccaagatggggctaccaaactccttcagaaccacctacgcagcact
ggcggcgtagcaccagccccagtgggtagccccctgacacgacacacaccgaggtcacca
gccagttggtctagtcctctaacatcccctaccaacacgtcacagaatacgccttcccct
agtgcatttgattatgatacagagaatatgaactcggaggagatctacagctctctgcgt
ggcgttacccaagccatccagaacttcagtgtgcggagccaagaggatatgactgaacct
cctcgcaaaagggagggagacggagaagagggtggtgctgagactacggatactggtcgg
acagccctggataacaaaacgtctctgctgaacaccatgcccctcctctcctctagtccc
cgcccaagcaaggagtatcagccaggtagttactcagactcttccttcggctcctccccc
tttagtaagagcctgaaagatgtactggaccaagacggcgagggccttacggatgatagc
agtgtggaccagtcagaggtggtggccgagctgttaaaggagctgtccaatcacagcgag
cgggtggaggagaggaaggcagcgctctgtgaactcatgcggctgatcagggaaacacag
ttgcacgtctgggatgaacattttaaaactattctcctgctgctgctggaaaccctgggg
gatggagagcatgtgattcgtgcactggcactgcgggtgctgaaggagattttgaacagg
cagccctggcgctttaagaactatgcagagctcaccattatgaagaccttggaagcacac
aaagacccacacaaagaggtgatccgagcagcagaagaagcagcggccatgctggcgagt
tccatcagcccggagcagtgcattaaggtgttgtgtcccatcattcagtctgcagactat
cccatcaatctggctgccatcaagatgctcaccaaagtaattgagcgactgcccaaggaa
agtctgctccagatgctgcaggagattgtccctggactcattcagggttatgataactct
gagagcagtgtacggaaagcttgcgtgttctgccttgttgccatctatgccatcatcggg
gaggatctcaaaccttacctcagccaactgtctggcagcaagctgaagctgttgaatctg
tatataaagcgcgctcagagtggctccagcggaagtgaccagtcgtcagatgtgggaggt
caaggcctgtag
DBGET
integrated database retrieval system
