Pangasianodon hypophthalmus (striped catfish): 113536114
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Entry
113536114 CDS
T05759
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
phyp04517
IgSF CAM signaling
phyp04530
Tight junction
phyp04810
Regulation of actin cytoskeleton
phyp05100
Bacterial invasion of epithelial cells
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113536114 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113536114 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
113536114 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
113536114 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113536114 (arpc1a)
05100 Bacterial invasion of epithelial cells
113536114 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113536114 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113536114 (arpc1a)
Membrane trafficking [BR:
phyp04131
]
Others
Actin-binding proteins
Arp2/3 complex
113536114 (arpc1a)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
113536114 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
RMC1_N
Rax2
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
113536114
NCBI-ProteinID:
XP_026785701
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWIKAHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
APTPWGSKMPFGQVMAEFGGAGSGGWVHSVCFSASGNRLAWVSHDSTVTVVDPTKSSTPS
QLKTEFLALLSVTFVSENNIVAAGHDCCPMLFNFDDGGNLTFISKLDIPKQSIQRNISAM
ERFRNMDKRATTEDRNSTLETLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccaccagtttctcttggagcccatcacatgccatgcatggaacagggacagg
acccaaattgctataagtccgaataatcatgaggtccatatatacaagaagagtgggaat
cagtggataaaagcccatgaactaaaagaacacaatgggcacattacaggcattgactgg
gctcctaaaagcgatcggattgtaacctgcggagcggatcgcaacgcttacgtatggagc
cagaaggacggcgtgtggaagcccactctcgtcatcctcaggatcaaccgtgctgccacg
ttcgtgaagtggtctccgctggagaacaagttcgcggtgggcagtggagctcgcctcata
tctgtttgctactttgagtctgaaaatgactggtgggtgagcaaacatatcaagaagcca
atccgctccactgtcctcagtctcgactggcatccaaacaatgtgcttctggcagctggg
tcatgtgacttcaaatgcagggtgttttctgcatacatcaaggaggtggatgagaagcca
gctccaactccatggggatccaagatgccgtttggccaagtgatggcagagtttggtgga
gcaggcagtggaggttgggtccacagtgtctgtttttctgccagtggaaatcgcctggcc
tgggtcagccatgacagcactgtgaccgtggtggatcccacaaaaagctcaacgccgagc
cagttgaagacagagttccttgctcttctgagtgtgacctttgtgtctgagaacaacatt
gttgcagcgggtcatgactgctgcccaatgctgtttaatttcgatgatggtggaaacttg
accttcatatccaagttggacattccaaagcagagcatccagcgcaacatctctgccatg
gagcgtttccgcaacatggacaagagagccactaccgaggatcgcaatagcactctggag
acccttcaccagaacagcatcacccaagtgtctatatatgaaggagacaaaagagattgt
cgcaaattctgcactacaggaatcgatggagcgatgaccatatgggactttaagacttta
gagtcttctatccaaggcctgcggatcatgtaa
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integrated database retrieval system
