Pangasianodon hypophthalmus (striped catfish): 113536115
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Entry
113536115 CDS
T05759
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
phyp04517
IgSF CAM signaling
phyp04530
Tight junction
phyp04810
Regulation of actin cytoskeleton
phyp05100
Bacterial invasion of epithelial cells
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113536115 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113536115 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
113536115 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
113536115 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113536115 (arpc1b)
05100 Bacterial invasion of epithelial cells
113536115 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113536115 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113536115 (arpc1b)
Membrane trafficking [BR:
phyp04131
]
Others
Actin-binding proteins
Arp2/3 complex
113536115 (arpc1b)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
113536115 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
eIF2A
Beta-prop_IFT122_1st
Beta-prop_EIPR1
EIF3I
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
113536115
NCBI-ProteinID:
XP_026785702
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHDVHIYKKEGNSWNKIHVLKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGDVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SVCYFEQENDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEEKP
APTPWGSKMPFGEVMFESSGTAGWVHGVSFSESGNRVAWASHDSTVAVAEGGKTAVITSL
TSETLPLLCVTFITENSLVAAGHDCYPVLFVYDAGKGALAFGGKLDVPKQSTQKGLTARE
RFQNLDKKATSDTKEAVLESLHKNSISQISVLDGGKAKCAKFCTTGMDGGMAIWDVKTLE
SAMKDLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccacagctttctgctggagcccatcagctgccacgcctggaacaaggatcga
actcaaattgcactgtgccccaataaccatgatgtccacatctataaaaaggaggggaat
agctggaacaagatccatgtgctaaaggagcacaatggccaagtcactggtatcgactgg
gcaccggagagcaaccgcatcgtgacctgcggcactgaccgtaacgcttacgtgtggacc
ctgaagggtgatgtgtggaagcccacgctggtcatcctcaggatcaaccgtgctgcccgc
tgcgttaagtggtcacccaaggaaaacaagttcgctgtggggagcggatcccgcctcatc
tcggtctgctacttcgagcaggagaatgactggtgggtttgtaagcacattaagaagccc
attcgctctactatcctgtgcctggactggcatcccaacaatgtcctgctggctgctgga
tcgtgtgatttcaaatgcaggattttctcagcctatatcaaagaggtggaggagaagccc
gctccaactccatggggctccaagatgccattcggagaggtgatgtttgagtcgtctggc
actgcaggctgggtgcatggggtttctttctccgagagcgggaatcgcgtggcctgggct
agtcatgacagcacggtcgctgtggctgaaggaggcaagactgctgtcatcaccagtctg
acttcagagacccttcccctgctttgtgtgaccttcatcactgagaacagcttagtggca
gcaggccacgactgttaccctgtgctgtttgtctacgatgctggaaaaggggctctggct
tttggggggaaacttgatgttcccaagcagagcactcagaaaggactgactgccagggag
cgcttccagaacctggacaagaaagccacgtcggacaccaaggaggccgtgctggagtcc
ctgcacaaaaacagcatcagtcaaatctcagtgcttgatggagggaaagcgaagtgcgcc
aaattctgcaccactgggatggatggaggaatggccatttgggatgtaaagacccttgaa
tctgccatgaaagatctgaagattgtctaa
DBGET
integrated database retrieval system
