Pangasianodon hypophthalmus (striped catfish): 113536121
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Entry
113536121 CDS
T05759
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03082
ATP-dependent chromatin remodeling
phyp03083
Polycomb repressive complex
phyp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113536121 (rbbp4)
03083 Polycomb repressive complex
113536121 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
113536121 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113536121 (rbbp4)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
113536121 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
113536121 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
113536121 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
113536121 (rbbp4)
PRC2.2
113536121 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
113536121 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
113536121 (rbbp4)
Chromatin remodeling factors
NuRD complex
113536121 (rbbp4)
NuRF complex
113536121 (rbbp4)
NuRF complex (fruit fly)
113536121 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
113536121
NCBI-ProteinID:
XP_026785711
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADT
EVQG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagaagctgcttttgatgatgcagttgaggagagggtgatcaatgaagag
tataagatatggaagaaaaacacgccattcctctacgacctggtgatgacccacgctctg
gagtggcccagtctcactgcacagtggctccctgatgtcaccaggcctgaggggaaagac
tacagtgtccaccggctggtcctcggcacccacacctctgatgagcaaaaccacctggtc
attgccagcgttcagctgccgaatgacgatgcccagtttgatgcctcacattacgacagt
gagaaaggggagtttggtggcttcggatcagtgagtggcaagatcgagattgagattaag
attaaccatgaaggagaagtgaaccgggcccgctacatgcctcagaacccctgcatcatt
gctaccaagactccaaccagtgacgtgctagtctttgattacaccaaacacccatccaaa
ccagacccctctggagaatgcactcctgacctgcgattgagaggacatcagaaagagggc
tatggtctatcttggaaccccaacctaagcggctgcctgctcagtgcctctgatgatcat
acgatctgtctgtgggacatcagcacagtacccaaggaagggaagatagttgatgctaag
accattttcactggtcacactgctgtggtggaggatgtgtcctggcatcttctgcatgaa
tcgctctttggatcagtagcagatgaccagaagctgatgatttgggatacacgctccaac
aacacatccaagcccagtcatgcagtggatgcccacactgcagaggtcaattgcctctca
ttcaatccttacagtgagttcatcctggctactggatctgctgacaagactgttgccttg
tgggatctcaggaaccttaagttgaagctgcattcctttgagtcgcacaaagacgaaata
ttccaggttcagtggtcacctcataacgagaccatcctggcctccagtggaacagacaga
cgtctcaatgtctgggacctcagtaaaattggtgaggagcagtcaccagaagatgcagaa
gatggacctcctgaattactgttcatccatggtgggcacacagccaagatctctgacttc
tcctggaaccccaatgagccatgggtgatctgctctgtgtctgaggacaacatcatgcaa
gtctggcagatggcggagaacatctacaatgatgaggaccctgaaggagcagcagacaca
gaggttcagggataa
DBGET
integrated database retrieval system
