Pangasianodon hypophthalmus (striped catfish): 113536125
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Entry
113536125 CDS
T05759
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113536125
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
113536125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
Motif
Other DBs
NCBI-GeneID:
113536125
NCBI-ProteinID:
XP_026785715
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MRQWSLRAVAPRAEPLPTGRVSPQLSDARMECCDVEPRYTIEQIDLLQRLRLSGLTKPQI
LQALESLERLDPEHRSPFCDNHSAPPRAPTSAAPAAPSSSSSSSSSLTSATTQTPVLDAA
LSPSNSYDASSPPLYPPGGVQRSFAYDLAEEDWDLEEKVEEYMRRDSNLVKEEIKAFLNN
RRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNSPGFRWTENQHAQ
GPRSRTDTPWSRQRELLMHLLPWYSAQQAQPGATLSMRSLVKEEPDWRVAGCPGDRAAVG
GPFRLRRGSRFTWRKECQSIMESFFIENQYPDEAKREEIANACNSVIQKPGCKLSEFERV
TALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSNGEEVENQEFGDQVVNQRF
PDQEELAQRKVTEPDGATLPAVEVVPLPSPAAQHVDQKMDDSKREAADEE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagtggagtctccgcgctgtggctccgcgcgctgagccgctccccacgggccgc
gtgtcaccgcaactctcagatgccaggatggagtgctgtgatgtggaaccacgctacacg
atcgagcagatcgacctgcttcagcgcctcaggctatcaggcttgaccaaacctcagatc
ctccaggccctggagtctctagagagactggatccagagcatcgctcgcctttctgtgac
aatcactcagccccgcctagggctcctacctctgcagctccggctgcaccttcttcctca
tcctcctcatcatcttctctcacctcagctaccacacagactccggttctagatgctgca
ctgtcccccagcaacagttacgatgcctcgtccccacccctgtacccacccggcggagtt
cagaggtcgttcgcttatgacctggcagaagaggattgggatctggaagagaaggtggag
gagtacatgaggagggacagtaacctggtaaaggaggagatcaaggctttcctcaataac
aggaggatctctcaggctattgtcggccaagttacaggtatcagtcaaagctacatctcc
cagtggttgcttcagcagggcctggagatgagcgactccaagcgccgggctttttaccgc
tggtatctgctggagcggaacagtccggggttcagatggactgaaaaccagcatgctcag
ggccccaggagcaggactgacaccccctggagtagacagagagaactactgatgcacctg
ctcccttggtactctgcacagcaggcccagccaggtgctactttgtccatgcgctcgctg
gtcaaagaggaacctgactggagggttgcaggttgccctggtgacagggcggctgtgggc
gggcctttcagactgaggaggggcagccgtttcacctggaggaaagagtgccagtcgatc
atggaaagtttctttatagagaatcagtatcctgatgaagccaaacgagaggagattgcc
aatgcctgcaactctgtcatccaaaaaccagggtgcaaactttctgaatttgagagagtc
actgctctgaaggtgtacaactggttcgccaatcgcaggaaggagatgaagagacgtgcc
aacatagaggctgccattcttgagagccatggcatagaagtgccaagccccagctgccac
tctaatggtgaagaggttgagaaccaggagtttggagatcaggttgtgaatcagcgattt
ccagatcaggaagagcttgctcagagaaaagtgactgagccagatggagccacactgcct
gcagtggaagtagtgcctcttccaagccctgctgctcagcatgtggatcagaagatggat
gattcaaaaagggaggctgctgatgaggagtga
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