Pangasianodon hypophthalmus (striped catfish): 113536200
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Entry
113536200 CDS
T05759
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
phyp04148
Efferocytosis
phyp04218
Cellular senescence
phyp04310
Wnt signaling pathway
phyp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113536200 (nfatc1)
04310 Wnt signaling pathway
113536200 (nfatc1)
04020 Calcium signaling pathway
113536200 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113536200 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
113536200 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
113536200 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113536200 (nfatc1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
113536200 (nfatc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
113536200
NCBI-ProteinID:
XP_026785836
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MKSADEDAYSYTPNISLSLPLSSPCLPTQYHNLQTSPSISVSISQPSSFSPSEDMGSMGY
YQSSGPNGAPALESPRIEITAYGQFPEDEVEENNAPVAKRVNSVVTLTLPSGEGYRDPSC
LSPASSVSSRSCHSEASSYESGYSCNYDNSSQNSPWQSPCVSPKGSSSLLSGTLGTSPRQ
SPTGSPRTSVTDESWTAPRGSRSNSPCGGKRKYSFNSNASHKYHPYSPNQSPGLSPQTSP
RLSMTEDAWLPNTNQYTNSAIVAAINALSTDGMTDIGEGIPLKTRKTSMEHNTSVSLKIE
PGGEETGSAELCHEDYSTSRLAFKKEGYTSFLDVPHHPYWSKPKPYISPSLPALDWQLPS
SSGPYSLQIEVQPKSHHRAHYETEGSRGAVKALAGGHPVVQLHGYMESEPLTLQLFIGTA
DDRLLRPHAFYQVHRITGKTVSTPSHEIMQANTKVLEIPLLPESNMRAIIDCAGILKLRN
SDIELRKGETDIGRKNTRVRMVFRVHINQPNGRTVSLQVASNPIECSQRSAQELPLVDRQ
SLDSCPATGGERMLISGHNFQPDSKVVFVEKGQDGHHIWEMEAKVEKDTFKTTALLVEIP
TYRNQRISSPVLVNFYICNGKRKRSQYQRFTYLPCNVPTIKTEPHDDYELPRLCAQQHSP
SLAKPYYGLQAVPALMPSENRACVTAAYGPQRLPAKPSSLSCSSSSPSTSPKLQDLSPTH
FSPQCLSPGSNPGLQPSAIPHVSAIQPTPGRYQQSVLYPSGSASSSPGSHPSTPSSAPEL
IFTPSHSLTQSPVTGEAAELPKVPVRSGPSPLLQDEGAPPTLAISIKQEPQELDQMYLDD
VNEIIRNDLSSISVHTHA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagcagatgaagatgcatacagctacacaccgaacatcagcctatcccttcca
ctgagtagcccttgccttcccacccagtaccacaaccttcagaccagtccctccatctct
gtctctataagccaaccttcatcattctcccccagtgaagacatgggctcgatgggatac
taccaatcatctggccccaatggagcccctgctctggaaagcccacgcatcgagatcaca
gcttatggtcagttccctgaagatgaggtggaagagaacaatgcacctgtagctaagcgc
gtcaactctgtagtgactttaacattgcctagtggtgaaggttaccgtgaccctagctgc
ctcagcccagctagcagcgtttcgtcacgtagctgccactcggaggcttcatcatatgag
tcaggctattcgtgcaattatgacaattcatcacagaactccccatggcagtcaccatgt
gtctcacccaaaggttcctcttcattgctgtctggaaccctgggcacctcacctcgccaa
tcacctacaggatctccccgcaccagtgtgactgatgaaagctggacagcacctcgtggc
tcccgctccaactccccttgtggtgggaaacggaaatacagctttaacagcaacgcctct
cacaaatatcatccatattcacctaaccagtcaccagggctgtctccacaaacctcacct
cgcctcagcatgactgaagacgcatggctgcccaacaccaaccagtacaccaattctgcc
attgtggcagccattaatgccctcagcactgatggaatgactgatattggagaggggatt
ccactcaagaccaggaaaaccagcatggagcataacacttctgtgagcctcaagattgag
cctggaggtgaggagacaggctctgcagagctctgtcatgaggactactccacgtcacgc
ctggcatttaagaaggagggctacaccagctttctggatgtaccacatcatccatattgg
tctaaaccaaagccttacatcagcccatccttgccagcacttgactggcagctgccctcc
agttctgggccatacagcctgcagatcgaggttcagcccaaatctcaccatcgtgctcac
tatgaaacagaaggaagcagaggggccgtgaaggcacttgccggaggacatccagttgtt
cagcttcacggctacatggagagcgagcctctgactctacagctgttcatcgggacggca
gacgaccgtctcctgcggccacacgctttttaccaggtccaccgcatcacaggcaagacc
gtgtccacacccagccacgagatcatgcaggccaacaccaaagtgctggagattccactc
ctgcccgagagcaacatgagggccataatcgactgtgctgggattctgaagctgcgaaac
tcggacatcgagctgcggaaaggcgagacagatatcgggaggaagaacacacgagtcagg
atggtgttccgcgtccatattaaccagcccaatggcaggaccgtgtccctgcaggttgca
tccaaccccatcgaatgctcccagcgttctgcacaggagctgcctctggtggacagacag
agtttggacagctgtcctgcaacagggggagagcgtatgcttatcagtggtcataacttc
caacctgactccaaggtggtgtttgtggagaaaggacaagatggtcatcacatatgggag
atggaagccaaagttgaaaaggacacctttaaaactacagctttgcttgtggagattcca
acttaccgaaaccaaagaatatccagccctgttttggtgaacttctacatatgcaatggc
aaacggaagaggagccaataccaacgattcacctacctaccatgtaatgttcccaccata
aagacagagccacatgatgactatgagctccctcgcctgtgtgcacagcagcactcccct
agccttgccaagccgtattacggtctgcaagctgtgcctgccctgatgccttcagaaaac
agagcctgtgtgacagccgcttatggccctcagagactcccagcaaaaccttcgtccctg
tcttgctcctcctcctctcccagcaccagccctaaactgcaggatctctcacccacacac
ttctctcctcagtgcctctctccaggctcgaaccctgggcttcagccaagtgccatccct
cacgtctcggcgatccagcccacgcctggccgctaccagcagtctgttctctacccatca
ggcagtgcgtcctcttctcctggctcccatccatctaccccgagttcagcacctgaactc
atcttcactcccagtcacagtttgacccagtctccggtcacaggtgaggccgcagagctg
cctaaagttccagtgaggagtgggccatctcctcttttacaggacgaaggagcacctccc
acgctggccatcagcatcaaacaggaaccacaagaactggatcaaatgtatctagatgat
gtcaatgagatcataaggaatgacctgtccagcatctccgttcatacccacgcatag
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