Pangasianodon hypophthalmus (striped catfish): 113536313
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Entry
113536313 CDS
T05759
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113536313 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113536313 (vps45)
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113536313 (vps45)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
NLRC4_HD
Motif
Other DBs
NCBI-GeneID:
113536313
NCBI-ProteinID:
XP_026785985
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MNVTLAVKQYVTKMIESSGPGMKVLLMDKETTSIVSMVYTQSEILQKEVYLFERIDSQNR
DSMKHLKAICFLRPTKDNVENLIQELRRPKYSVYFIFFSNVISKSEVKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLQGVSRGRSWDPSVLPRVTQGLTSVLLALKKCPMIRYQLS
SDMAKRLAESVKQIISKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLREVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
GQQKLESIADMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERQLMEVSEVEQELACQ
NDHSSAQQNVRRMLQNPRLTELDAVRLVMLYALRYERHSSSILPSLLEELNRRGVSEKYR
KMVQAVIEYGGKRVRGSDLITPTDAVAITKQFFKGLKGVENVYTQHQPLLHDTLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFIIGGAMYEEALTVYNLNRTMPGVRIVLGGTTIHNT
KSFLEEVTLAAGLSHGGDRGSHGAGHPPTRR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgactttagctgttaaacagtatgtcaccaaaatgatagagagcagcggacca
ggaatgaaggttttgctcatggataaagaaacgaccagcattgtgagtatggtttacaca
caatccgagatcctgcagaaggaggtctacctgtttgagcggatagactcacagaaccgt
gacagcatgaaacatctgaaggccatctgcttcctgagaccaaccaaggataatgtagag
aatctgattcaggagctgcgacgtcccaaatacagcgtctactttatttttttcagtaat
gtcatcagtaagagtgaagtgaaggccttggcagaagctgatgagcaggaggttgttgca
gaggtgcaggagttctatggagacttcattgctgtgaatcctcatctgttctccctcaat
ctacaaggagtatccaggggtcgcagttgggatcccagtgttcttccacgtgtcactcaa
ggtttgacctctgtgctgttggccttaaagaagtgtcccatgattcgctaccagctctcc
tctgacatggccaagagactggctgaaagtgttaagcaaatcatcagcaaggagtatgaa
ctgtttgacttcaggaaaaccgaagttccccctcttctgctgattctggaccgaagtgat
gatgcgatcacacccctccttaaccagtggacatatcaggcaatggttcatgagctgctt
ggcctcaacaacaaccgaatagatctgtcccgagtgcctggcatcagtaaagacctgaga
gaggtggtgttgtctgcagagaatgatgaattctatgccaataacttgtacctgaacttt
ggtgaaattggaacaaacattaaaaacctgatggaagactttcagaagaaaaagccaaag
ggccaacagaaactagagtccattgctgacatgaaggcgtttgtggataactacccgcag
tttaagaagatgtcgggcacagtctccaagcatgtgacggtggtgggcgagttgtctcgg
ctagtcagtgagaggcagttaatggaggtatctgaggtggagcaggagcttgcatgccag
aatgatcactctagcgcccagcagaatgtgcggcgtatgctgcagaacccacgtttgacg
gagcttgatgcggtgcgtctggtgatgctatatgctctgcgctatgagagacacagtagc
agcatcctgcccagtctcttggaagagctaaacaggagaggggtgtctgaaaaatatcgc
aagatggtacaagccgtgatcgagtacggaggcaaacgggtcagaggaagtgatctcatt
actcctacagatgctgtggccatcaccaaacagtttttcaaaggactcaagggtgttgag
aatgtctatacccagcaccagcccctgctgcatgacacactggatcagctaattaaaggc
cgtttgaaggacagtcagtttccctacctcgggccgagttctctgcgggacaggccacag
gacatcattgtgttcatcatcggaggcgccatgtatgaagaagcactgaccgtgtacaac
ctgaaccgcaccatgccaggagttcgcattgtgcttggaggaacaaccattcacaacacc
aaaagcttcctggaggaggtgacattagcagctggcttgagtcatgggggagacaggggg
tcacacggagccgggcatccaccaaccaggcgctga
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