Pangasianodon hypophthalmus (striped catfish): 113536366
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Entry
113536366 CDS
T05759
Symbol
sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113536366 (sox2)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113536366 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113536366
NCBI-ProteinID:
XP_026786044
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MYNMMETELKPNPGGNNTGTGNSGGGTPGQKNSPERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK
YALPGGLLAPGGGGGGNLGGNGMSAGVGSGLGGLGVNLGVNQRMDAYAHMNGCWSNGGYG
MMQEQLGYAAAASPMQQQQQQHHVHRYDMSALQPYGSMTSAQTYMNGSPTYSMSSYPQLS
SMGSAVKSEASSSPPAVTSASHVRAAAAPAPAHAPPPPSCQTGDLRDMISMYLPGAEVAE
QTGQSRLHLSQHYQSAPVHATTINGTIPLSHM
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagaccgagttgaaacccaatcccgggggtaataacaccggcacc
gggaacagcggaggcggcacaccggggcagaagaacagtccggagcgcgtaaagaggccc
atgaacgcgttcatggtgtggtcccgcggtcagcggcggaaaatggcgcaagagaacccg
aagatgcacaactcggagatcagtaagaggctgggcgcggagtggaagctgctgtccgag
tctgagaagcggccgttcatcgacgaggccaagcggctgcgcgctctgcacatgaaggag
cacccggactacaagtaccgaccgcggcggaagaccaagacgctcatgaagaaggacaag
tacgcgctgcccggcgggctcctggcaccgggcggcggcggcggcggaaacctgggcgga
aacggcatgagcgccggcgtgggctcgggcctcggcggcctcggcgtcaacctcggggtc
aatcagaggatggacgcgtacgcgcacatgaacggctgctggagcaacggaggctacggc
atgatgcaggaacaactgggctacgcggcggcggcgagtcccatgcagcagcagcagcag
cagcaccacgtccaccgctacgacatgagcgcgctgcagccgtacggctccatgacgagc
gcgcagacctacatgaacggctcgcccacatacagcatgtcgtcttacccgcagctcagc
tccatgggctcggctgtgaaatccgaggccagctcgagtccacccgccgtcacgtccgcg
tcgcacgtcagagccgccgcagcgcccgcacctgcacacgcaccgccgccgccctcgtgc
caaaccggggacctgcgggacatgatcagcatgtatctgcccggggcggaagtggccgag
cagacgggccagagcagactgcacctgtcgcagcactaccagagcgcacctgtgcacgcc
accacgattaacggcaccatcccgttatcgcacatgtaa
DBGET
integrated database retrieval system
