Pangasianodon hypophthalmus (striped catfish): 113536368
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Entry
113536368 CDS
T05759
Name
(RefSeq) caprin-1-like
KO
K18743
caprin-1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113536368
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
113536368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
113536368
NCBI-ProteinID:
XP_026786045
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MPSATTGDYAVQSSSPELGAAPVSAPTEALKQVLSIIEKKVRNMEKRKSKLEDYKTRKTK
GERLNQDQLEALSKAQEVAHNLDFAREMLKSFSSLNVEIQKAVKKTARREQLKREEAEQR
RLKAVLEVQYVLDQLGEETVRQELRQVERGNDGPLLTEAELTGLDDFYKLVGPERDPNIR
LTDQFEEASVHLWELMEGRDKAVAGTTYKALKETLDKILLSGYFDQTQTHQNGVCEEEEE
EVEQQQQQPAPAPAESVECEEQPAEPEGSVTQEFTEPIEVEATEFVNRKFIPEATYNTST
EKEQGGEWAVSSEIVSSLQQQQQQPQPPQPQQPPSSMSPALVSSETHSLAPVLPPSSADP
LVRKQAVQDLMAQMQGTYNFMQDSMLEFDGQPLDPAIVSAQPMKSAQMVCAPAHTETRLP
QHSTVPVHPEPTQVPMVSPPTEAYTSTPPLYQPPHSTDPRPQPDPIDPLQVSMPLSSEQP
PAPSSQPQAFQSVSKPLHSGINVNAAPFQSMQTVFNLNAPVPPSNELESPKMSSQYQSTY
TQNFSSQPTHSVEQQELQQEPLQSVVGAFHSQDQGIPSSGGHQSMSQQPSGQGAGFGRQP
QSFYSSRAVPRGGPRNARGAMNGYRGPSNGFRGPFCSLSLSLCLCLSLSLSLSERGGYTW
SPAPDNRLSSMVLVRRPGRRWGGNPEAEAGRGSNPAELQERSGVLEEAAGSLVEAGDRL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgcaaccactggtgactatgctgttcagtcctccagtccagagctgggcgct
gctcccgtatcagctcccaccgaggccctgaagcaagtgctgagcatcatcgagaagaag
gtccgcaacatggagaagagaaagtccaagctggaagactacaagacacggaagaccaaa
ggagagcggctaaatcaggatcagctggaagctttgtccaaagctcaggaggtggcacac
aacttggactttgcccgggagatgctgaagagcttctcgtctttaaatgtcgagatccag
aaggcggtgaagaagacggcgcgtcgggagcagctgaagcgcgaggaggctgagcagcgg
cgcctgaaggctgtgctggaggtgcagtacgttctggaccagctcggcgaggagaccgtg
aggcaggagctcaggcaggtggagcgagggaacgatgggcctctgctcaccgaagccgag
ctcacggggctcgacgacttctacaagctggtcggccctgagagggaccccaacatcagg
ctgaccgatcagtttgaggaggcgtccgtgcatttgtgggagttgatggaaggaagagac
aaagctgtggcaggaaccacatacaaggcccttaaggagactttggacaagatactgctc
agcggctacttcgaccagacgcaaacgcaccagaacggagtgtgtgaggaagaggaggag
gaggtggagcagcagcagcagcagcctgctcctgctcctgccgagtcagtggagtgcgag
gagcagccggcggagccagaagggtcggtcactcaagaattcacggagcccatcgaagtg
gaagcaacagagtttgtaaaccgaaaattcattccagaagccacttataacaccagtact
gaaaaagagcagggaggggaatgggctgtgagctctgagatcgtaagctcccttcagcag
cagcagcagcagccgcagcctcctcagcctcagcagcctccttcatcgatgagcccggct
ctcgtgagctcggagacccactcgctcgcccccgtactccctccctcctcggctgacccg
ctggtcaggaagcaggctgtgcaggacctcatggcacagatgcagggcacctacaacttc
atgcaggactccatgctggagtttgacggacagcctctggatcccgccatcgtatctgct
cagcctatgaagtctgcacagatggtctgtgctccagctcacacagaaacccgactccct
caacacagcacagtccctgtacatccagaaccaacacaagttcccatggtgtcccctccc
accgaagcgtacacctctacgccgccgctctaccagccccctcacagcacagaccctcgg
cctcagcccgaccccatcgaccccctccaggtgtccatgcccctgtcgtctgagcagccc
cctgccccgtcgtcccagccccaggccttccagtccgtctccaaacccctgcacagtggc
atcaacgttaacgccgcaccattccagtccatgcaaacggtgttcaatctgaatgcccca
gttcctccctcgaatgagctggagtctccgaagatgtcgagtcagtatcagagcacttac
acccagaacttcagcagccagcccacacactcggtggagcagcaggagcttcagcaggaa
cctctccagtcagttgtcggcgcgttccactctcaagaccaagggattccttcctccggg
ggccaccagtcgatgagccagcagccatcgggtcagggcgcagggttcggacgccagccg
cagtctttctacagcagccgagccgtgccacgtggaggacctcgcaacgccagaggggcc
atgaacggataccgcggaccatccaacggcttcagaggtccgttctgttctctctctctc
tctctgtgtctctgtctgtctctctctctctctctctcagaaagaggaggatacacgtgg
agtccagctcctgataaccgtctctcgtctatggtacttgtccgacgtcctggacggcgt
tggggtgggaatcctgaggcagaggctggccgtggctcaaatcctgctgagctgcaggag
cgttctggtgtcctggaggaagcggctggttctctggtggaggctggtgatcgtctttag
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