Pangasianodon hypophthalmus (striped catfish): 113536420
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Entry
113536420 CDS
T05759
Name
(RefSeq) serum response factor-like
KO
K04378
serum response factor
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113536420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113536420
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
113536420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
113536420
NCBI-ProteinID:
XP_026786115
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MEHLPPGSNQLCVSGSDADSDTAEEEEAAGCVERSAEQRRRAERDTGASAPAIARALTSG
VAGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASE
TGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPRSDSAADQRMSATGFEETDITYQVT
ESDGSTEEKEVIKSAGMSMTSSSAEAPSSSSAQPESSGPPLPAATCWSVSNGTLVKTSTS
ATGVVQLPPGFTLMPGAAMSQQLQSTESSEVQNFSNTAGSHSAVLASSIAGHVICPSAVM
YANSASTLTDNAHTLAHDTLPQMFLTSPNGTVQIPVSAVPLHSMLINQQNSSSTHTLTEL
RGVNMDSSKTE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggagcacctgcctcccgggagtaatcagctctgtgtgagcggctcggacgcagactcg
gacacggcggaggaggaggaggcggcgggctgcgtggagaggagcgccgagcagcggcgg
agagcagagcgggacaccggcgcctcagccccggccatagctcgcgccttgaccagcgga
gtagcgggggccaagccaggcaaaaagacccgcggcagagtcaaaattaaaatggagttc
attgacaacaaactgagacggtataccactttcagcaaaagaaagaccggcatcatgaag
aaggcatatgagctgtccaccctcaccgggactcaggtgctgttgttggtggcgagtgag
acgggtcacgtttacacatttgcaacacggaagctacagccaatgatcacgagtgagaca
ggcaaggcgctgatccagacgtgtttaaactcgcctgactctccacgctctgactcagcc
gctgatcagaggatgagcgctacgggcttcgaagagactgacatcacctatcaggtcacc
gagagtgatggcagcacagaggagaaggaagtgatcaagtctgcaggaatgagtatgacc
agcagcagtgcagaggctccgtcctcttcctctgctcagccagagagcagtggcccccct
ctccctgctgccacctgctggtcggtgtctaacggtacgctggtgaagacgtctacctct
gcaaccggagtagtgcagctcccccctggattcacactcatgcctggtgcagcaatgtct
cagcagcttcaatcgactgagagcagtgaagtgcagaatttcagcaacacggctggaagt
cactctgcagtgttggcgtcctcgatagcgggacatgtgatctgcccgagcgcagtgatg
tatgctaactcagcctccacgttaacggataatgcacacacacttgcacatgatacactt
cctcagatgttcctcacatctcctaatggaacggttcagattcctgtctctgctgttcca
ctgcattcgatgttgataaatcagcagaactccagcagcacgcacacactgacagagtta
cgtggggtcaacatggacagttctaaaacagagtga
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integrated database retrieval system
