Pangasianodon hypophthalmus (striped catfish): 113536474
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Entry
113536474 CDS
T05759
Name
(RefSeq) cadherin-related family member 5-like isoform X1
KO
K16505
cadherin-related family member 5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113536474
Cell adhesion molecules [BR:
phyp04515
]
Cadherins
Cadherin related
113536474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
113536474
NCBI-ProteinID:
XP_026786190
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MERKYKLKSLNTAFSCMIAFLLHKFCLAEKICSVPSEPVTIKENNTINAVVVHINTTTKN
VTLTLTENPDNAFDLRGLDLIVKKRLDFETLLNPEELTVQIRCNKTGSRSITLTVLVQVE
NINDNPPSFAQSKYILDVNELTPVNTSVAQIEAKDDDSGVLYYALEPTLNPYFRLENMYK
PNILVNKTLDYDVVQQVTLTLYVQDTPPLSLPGQISFTATTTIIINIKDIDNRPPWFQPC
TRITFGTAKICLSVGYKGRVNLTERQEGPLQLHPGPIYARDGDRSRNEEISYKIVRGNED
NIFQIDEITGNITMLKPADIAGPISLTVLASQVSNRDQFASTSVNIEVMKKSRNPPKFER
ERYEAYVYSNSGPENMVLRDRTSNRPFRVRARDDDFANGINPDIRYEVQYSSYVNITTDG
FVLLKKPVRTDSFALQVRAVDVSTGESGTAALSVLVLPPVGVQSPSEGYRAGDMALLGFV
MAALLVLCLIVIGYLISRLKKRNPDTLKLSECLGPCLQHTQPTDGLRPRDSMQFTNDGFL
NEADMGRLATRRPDKRDRKQEVSPKWRVRVTPRERQGHCNSCGTRVRSNHVHRSSPALHP
KAQGAKNQVRSILTKERRKDRQKTVWFKESEDSSDIEVEIIPDDIGLKHEEEDENSSSLA
LKASDMELGELTMMNIQDFDKQQENVSDHQEPPDPDKTVQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaaatataagctaaaatccctaaacactgccttcagctgcatgatagcgttc
ctcctccacaaattctgccttgctgaaaaaatttgttcagttccctcagagcctgtgact
attaaagagaacaacacaatcaatgccgttgttgtccatattaacacaacaacaaagaac
gtcacactgactctcaccgagaacccagacaatgcttttgacctgaggggactggatctg
atcgtgaagaaacgcctggactttgaaactctgttaaatcctgaggagctcacagttcaa
atccgctgcaataaaacaggatccagaagtatcactttgacagtgcttgttcaagtcgag
aacatcaatgacaaccctccttcatttgcccagagtaaatacattctagatgttaatgag
ctcacacctgttaacaccagcgtggcccagattgaagcaaaagatgatgattcaggagtt
ttatattacgccttggaaccaactctgaacccatatttccgactcgagaacatgtacaag
ccaaatattctcgtcaacaagactttggattatgatgtcgtccagcaggtgacattgacc
ttatatgtgcaggatactccaccattgtcactgccaggccaaatctctttcacagccacc
acgacgattataatcaacataaaagacattgacaaccgtccaccctggttccagccgtgc
acgagaataacttttggtaccgccaaaatctgcctgagcgttgggtataagggcagagtc
aacttaacagaaagacaggaaggaccactacagttacatccagggccaatctacgcaaga
gatggagacagaagcagaaatgaagagattagctataaaattgttagaggaaatgaagac
aacatatttcaaatagatgaaatcacgggaaacataaccatgctaaaaccagcggacatt
gcaggcccaatatctctcacagttttggcttcccaggtgtcaaaccgtgaccagtttgct
tccacttcagtcaacatcgaggtgatgaaaaagagcaggaacccaccaaaattcgagagg
gaacgctatgaggcatatgtttacagcaactcaggccctgagaacatggtgctcagggac
aggacttcaaatagacccttcagagtcagagccagggatgatgattttgcaaatggaata
aatcctgacataagatacgaagtacagtacagcagttacgtcaacataaccacagatgga
tttgtgcttctgaaaaaacctgttcggaccgactcgtttgctttgcaagttcgggctgtt
gatgtgtcaactggtgagtcgggaacggcggctctgtccgtgcttgtcctaccacccgtg
ggagtgcagtcgccctcagagggataccgtgctggagatatggccttgctgggcttcgta
atggctgccttgctggttctctgcctcatcgtgattggctatctcatctcccgtctgaag
aaaaggaacccagacacactcaagttatcagagtgtttaggtccatgcttgcagcatact
caacccactgatgggttaaggccaagagacagcatgcagttcaccaatgatggcttcctg
aatgaagcagacatgggcaggttggcaacgaggaggccagataagagagacaggaagcag
gaagtgtctccgaaatggagagtgagagtgacaccacgtgagaggcaaggacactgcaat
tcctgtggcacgcgagttcgctcgaaccatgtgcaccgcagcagcccagctctccacccc
aaagcccaaggagctaaaaaccaagtcagatccatcctaactaaagagagaaggaaggac
agacagaagacggtgtggtttaaagagagtgaggattcctcagacatcgaagtggagatc
attcctgatgacatagggcttaaacatgaggaagaggatgaaaactcgtcttctctggct
ctaaaagccagtgatatggaattgggtgagttgactatgatgaacatccaggactttgac
aagcagcaggaaaatgtttctgaccaccaagagccaccggatccagacaaaacagtccag
tga
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