Pangasianodon hypophthalmus (striped catfish): 113536476
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Entry
113536476 CDS
T05759
Name
(RefSeq) CLIP-associating protein 1-A-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113536476
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113536476
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
113536476
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
113536476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
MMS19_C
Dopey_N
ParcG
HEAT_DAAF5
TAN
Motif
Other DBs
NCBI-GeneID:
113536476
NCBI-ProteinID:
XP_026786193
LinkDB
All DBs
Position
Unknown
AA seq
1571 aa
AA seq
DB search
MEANMEYIVGQVMQKDLGRRLQVGQEIIDYILDRQKSHDLEQDQTMLDRMVDGLATSWVN
SSNFKVALLGMDIVSALVTRLQNRFKPQIGTVLPSLTDRLGDAKDQVRDQAQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTREAVCFCLISTLNIYGAQGLTLSKIVPHICSLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMVLSADKNI
DDDDSVDGGRSSASSKGAASVRRTGSTRRPSSASSTKSTGKEVSGAGAVDEEDFIRAFED
VPTVQIYSSRELEESMNKIREVLSDEKQDWEHRVAALKKVRSLLLAGATDHEAFLQQLRQ
LEGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAESIMPTLLNLVPNSAKVMATS
GVAAIRLIIRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTSCLDRHVPVLM
ETIKKGVHDADSEARSVARKCYWGFHGHFSKEAEQLFQALELTYQKALQLHLKSSDSIMS
LPQSDRSSSSSQESLNRPQSAKAPVGSSVTRNKVVSSRVSSTPGSLQRSRSDVDVNAAAT
AKSRMPKVPAAAPFSSAGALPPGSYASLDATPGNVEGRVRTRRQSSGSSVGGGASVTDSR
GRSRAKVVSQSQRSRSANQAGGKTHAGSRSSSPGKLIGQSHGKMSSVTPAEKRTRIPRSQ
GCSRESSPGRSGQARGSRIPRPSMSQGCSRDTSRESSRDTSPARGFTPLVSRRHSRSTSA
LTGGDVLQTDRFGLIHQARISASVNAMRILNTGMEVEAAVADALLLGDSRNKRRPMRRWY
ESAGMYSDDDANSDASSACSELSYSSRNGGVPHYMRQTEDVAEILNHCASSNWSERKEGL
LGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIVLHREDLQDWL
FVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKV
AILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKTLHSWVSEELAGRLS
SLTSLPVEGNLEERCKQAAQMVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNS
SNAAATSSPSNTVGRTPPRLSGSRTSPLTSPTNCSHGGLSPSMLEYDTENMNSEEIYSSL
RGVTEAIQSFSFRSQEDSYEPIKRDTKKDDASAVASSAADPRLGTDMMEGGRTALDNKTS
LLNTPSPRSFLGPRTREYNPYNYTDSISTYDKAALKEAVFDDDVEQLRDGRRQEFGENKI
TAPKSYSACPAQHMELVGDLLKELSNHSERVEERRAALLELLKVTRDDSVAVWEEHFKTM
LLLLLETLGDKDHTIRALALRVLKEILRSQPARFRNYAELTIMKTLEAHRDSHKEVVRAA
EEAASTLASSIHPEQCIKVLCPIIQTADYPIDLAAIKMQTKVIERIPEESLYQLLPDIIP
GLLQGYDNTESSVRKASVFCLVAIYSVIGEGLKPHLAQLTGSKMKLLNLYIKRAQTTNSN
SSSSSDISSHS
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaatatggaatatattgtgggacaggtgatgcagaaagacttgggacggcga
ctccaggtcggacaggagatcatagactacattctggataggcagaagtcacatgacctg
gagcaggatcagaccatgctggacaggatggtggacggcctggctacttcatgggtcaac
tcgagcaacttcaaggtggctcttctgggaatggacattgtgtctgctttagtgaccaga
ttacaaaatcgctttaaaccccaaattggtacagtcctgcccagtttaacagaccgttta
ggtgatgccaaagaccaagtgagagaccaagcccaggctctgctgttaaaaataatggat
caagctgccaatccacagtacgtatgggatcgaatgttgggaggattcaaacacaagaac
aacaggactagagaggctgtctgtttttgccttatttccacactaaatatatatggagcc
cagggtttaactctgagcaagattgttcctcacatatgcagtctgttaggagaccccaca
agtcaggtccgagatggagctatgaactgtcttgtggagatttacagacatgttggagaa
agagtgcgaatggatctcgggaaaaaaggcttgccacaatcacggttgaatgtcattttt
agcaaatttgacgaagtacagcgatcagggaatatggtgctgtctgcagataagaacata
gatgatgacgactctgtggatggaggccgttcctccgcctcctctaaaggagcagcgtct
gtccgccgaacaggatccacgcgcaggccgagctccgcctccagcaccaagagcacagga
aaagaggtgtcaggtgctggtgctgtggatgaggaagacttcatccgtgcctttgaggat
gtgcccaccgtacagatttactccagcagagagctcgaggagtccatgaataaaatcaga
gaggtcctctcagatgaaaaacaagactgggagcacagagtggccgcgctgaagaaggtg
cgttcgctgctgctcgccggggccactgatcatgaagcgttcctccaacaactgcggcag
ctggaaggagcgtttaagctctccgctaaagacctgcgctctcaggttgtccgtgaggcc
tgcatcacgctggggcatctgtcgtctgtgctgggtaacaagtttgaccatggagccgag
tccatcatgcccacgttgctcaatctcgtccccaacagcgctaaagtgatggctacatcc
ggcgtcgcagccatccgccttattatacgacacacacactatcctcggcttatccccatc
attaccagtaactgtacgtccaaatccgtggctgtccggcgacgctgttatgagttttta
gaccttttactccaggagtggcagacgagctgtctggacagacatgtacctgttctgatg
gagaccattaagaaaggagtccacgatgcagactcagaagccagatcggttgccagaaag
tgttattggggattccacggccacttcagtaaggaggcggagcaactgtttcaggctctc
gagctgacctatcagaaggctctgcagttgcatctgaagagctcggacagtattatgtct
ctcccccaatccgatcgctcctcttccagctctcaagagagcctcaatcgtccacagtct
gctaaagcacccgtaggaagcagtgtaaccagaaataaagtggtgagctctagagtgtcc
tctacccctggctcactgcagcgatcacgcagcgatgtcgacgtcaacgccgccgccacc
gccaagtctcgaatgcccaaagtaccagctgctgctccgttcagctcagccggtgcactg
ccgcctggctcctacgcctcgctagatgcaactcctggtaatgtggagggtcgtgtgcgc
acacggagacagagttcaggcagcagcgttggaggcggagcctctgttacagacagtagg
gggcggagccgagcaaaagtggtgtcgcaatcacaacgatccagatcagcaaaccaagca
ggtggtaagactcacgctgggagtcgttccagttctccagggaagcttattggtcagtcc
catggcaaaatgtcctctgtgaccccagcagagaagcgcactaggatcccacgcagtcag
ggctgcagccgagagagcagccccggtcgctctggccaggcgcggggtagtcgcatcccg
cggcccagtatgagtcaggggtgcagtcgtgacacaagcagggagagcagcagagacaca
agtcctgcacggggttttactccccttgtgtctcggcgccactcgcgctccaccagtgcc
ctgacaggcggcgacgtgctgcaaacagatcgttttgggctgatccatcaggcgcggatc
tctgcctcggtcaacgccatgcgcatcctgaacacaggcatggaggtggaggcagctgtc
gctgatgctctgctattaggagactccaggaataagcggaggcccatgcggcgctggtac
gagtctgctggcatgtactcggacgatgacgccaacagcgacgcctccagcgcctgttcg
gagctttcctatagctcgcgtaacggaggagtgccgcactacatgcgtcagacagaggac
gtagccgagatcctaaaccactgcgccagttccaactggtccgagaggaaagaaggcctg
ctgggcctccagaaccttctgaagagccaaagaaccctcagccgtgtggagctcaagagg
ctgtgtgagattttcactaggatgtttgccgaccctcacagcaagagagtgttcagcatg
ttcctggaaacgctggtggacttcatcgtgctgcacagggaggatttgcaggactggctc
tttgtgctcctcacacagctgttaaagaagatgggcgctgatctgctgggctcagtgcag
gccaaagtgcagaaagctctcgatgtcaccagggattcttttccctacgatcagcagttc
aacatcttaatgcgcttcattgtcgatcagacacaaaccccaaacctcaaggtgaaggtg
gccattctgaagtatatcgagtctctggccagacaaatggatcccactgattttgtgaac
tccagtgagacgcgacttgccgtctcccgcatcatcacctggacgacggaacccaagagc
tcagatgtcagaaagaccctgcacagctgggtaagtgaggagctggcaggcaggctcagc
tcactcacctccctccccgtggagggcaacctggaggagagatgtaagcaggctgctcag
atggtgctgatctccctgttcgagctgaacacaccagagttcacaatgctgctgggagcg
ctgcctaaaaccttccaggatggagccaccaaactcctgcataatcacctgaagaactcc
agcaatgctgccgccacgagttcaccaagcaacacagttggccgcacacctccgagactc
tctggttcccgcaccagtcccctgacgtcccctaccaactgctctcatggaggcctctca
cccagcatgctggaatacgacacagagaacatgaactcagaggagatctacagctctctg
agaggagtcactgaagccattcagagcttcagcttccgcagccaggaggacagctacgag
ccaatcaaacgcgacaccaagaaagacgacgcgagtgccgtagcgtcctctgctgcagac
ccccggctaggtacagacatgatggaggggggccgaacggctctggacaacaagacctcg
ttactgaacacaccgtcccctcgctctttcctggggccgaggacgcgcgagtacaatccc
tacaactacaccgactccatcagcacttatgataaagccgctctgaaggaggcagtgttc
gatgatgatgtggaacagctccgtgatggtcgtcgtcaagagtttggtgaaaacaaaatc
acggctcccaaaagttattctgcatgccctgcgcagcacatggagctggttggtgacctc
ctgaaggagctgtccaatcacagcgagcgtgtggaggagaggcgggccgccctgttggag
ctgttgaaggtgacccgcgatgacagcgtagccgtatgggaggagcattttaaaaccatg
ctgctgctgctccttgagacactgggggacaaagatcacaccatccgggcactggctttg
cgtgttctgaaagagatcctgcgaagtcaacctgcacgcttcaggaactatgcagaactg
accattatgaaaacactggaggcacacagagactcccacaaagaggtggtgcgtgctgca
gaggaggccgcctccaccctggcttcctccatccacccggagcagtgcattaaggtgctg
tgtcccatcatacagactgcagactaccccatcgacctggccgccattaaaatgcagacc
aaagtcatcgagcgcattccagaggagtccctttatcagctgctgcctgatatcatcccc
ggcctgctacagggatacgataacactgagagcagcgtgcggaaagccagtgtcttctgc
cttgtggcaatttattctgtgattggagaagggttgaagcctcatcttgcccaactgacg
ggcagcaagatgaaactgctgaacctctacatcaagcgagcccaaactaccaacagcaac
agcagcagctcctctgacatctcctcccacagctaa
DBGET
integrated database retrieval system
