Pangasianodon hypophthalmus (striped catfish): 113536535
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Entry
113536535 CDS
T05759
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04517
IgSF CAM signaling
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113536535 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113536535 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113536535 (sptbn1)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113536535 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
113536535 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CENP-K
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
113536535
NCBI-ProteinID:
XP_026786328
LinkDB
All DBs
Position
Unknown
AA seq
2349 aa
AA seq
DB search
MTTVAAEYDHMDIQQQYQDTVNNRWDEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVVTEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVAKELEAENYHDIKRIAARKDNVLRLWDYLLELLKARRQRLEMNLGVQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRAVNSTAQKFAVDDEGY
KPCDPQVIRDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDVGKDLTGAVRLLSKHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEAKIRERVAD
VQAQWAALEQLAAVRKARLEEACSLHQFQADADDVDAWMLDALRIVSSDDVGHDEFSTQA
LVKKHKDAAAEVASYRPVIDSLHEQAQALPDELAHSVDVSGRLAGIEERYKELTELTRLR
KQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQDLGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEAER
LAAEHPEQAKAITDRLAEIGTVWEELKDTLQNREASLGEASKLQQFLRQLDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKHEIDNYEEDYQKMRDMGEMVTQGQTDAQHMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAETFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINAEKIQERATSIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKEGMQLVSEKPETEAVVKEKLAVLQTQWQELESTTQTKAQCLFDANK
AELFTQSCADLDKWLASLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRKREVEELQS
QAHVLRQEGKDTDEVDGRREVVEKKFQELLDPLQKRKNFLTASREIHQFNRDVEDEILWV
EERMPLATSTDHGHNLQTVQMLIKKNQTLQKEIQGHQPRCDDIFERSQSIVTVDSPSVEA
IRARLAELQDLWNLLIQETAKRHERLEEAHQAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVADNHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDVKEILSRILDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVRQ
LQEDATRLQSAYAGDKADDIQRRESEVLDAWRNLLEACEGRRARLLDTGDKFRFFNMVRD
LMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
KEVGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRRQEEEERRRKPPT
PEPEQEIEPQQREGEQIAQNGLPSDQESPRDGVDGEIVNGVPERSSKEPSPVPSPSSGRR
AKGSQSSTLPAKSQESPSAQLEGFLHRKHEFEGHNKKASNRSWHNVYCVINNQEMGFYKD
NKNAGQGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRVTNGNEYLFQAKDDEEMNTWM
QAIQNAVSGSSPSDKSDVTPSNQSTPASSRAHTLPATVTLTTESSPGKREKDKEKDKEKR
FSLFSKKKQ
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgccgaatatgaccacatggacatccagcagcagtaccaggacact
gtcaacaaccgctgggatgaggagtgggataacgagaacagttcagcccgcctgttcgag
cgctcacgtatcaaggccttagcagatgagcgtgaggcggtgcagaagaagaccttcaca
aaatgggtcaactcacacctggcacgggtctcctgccgcattacagacctgtacatggac
ctacgggatggacgcatgctcatcaagctcctggaggtgctctctggagagaagctgccc
aaacccacgaagggccgaatgagaatccactgtctggagaacgtggataaagccctgcag
ttcctcaaggagcaacgcgtccacctggagaacatgggctcccatgacatcgttgatggc
aaccatcgcctcacgctcggcctcatctggaccatcattctccgcttccagatccaagac
atcagcgttgtaacagaagacaataaagagaagcgctcagctaaagacgctctgcttctg
tggtgtcagatgaagacggcaggctatccaaatgtcaacatccacaacttcaccaccagc
tggcgcgacggaatggcgttcaacgccctcattcacaaacacaggccggatcttattgat
tttgacaagctgaagaagtccaacgctcactacaacctgcagaatgccttcaacttggct
gagcagcacctgggcctcactaaactgctggaccctgaggatatcagtgtggaccatcct
gatgagaagtcagtcatcacctacgtcgtcacatactaccactatttctccaagatgaag
gctctgaaggtggagggcaaacgtattggaaaagtgctcgataacgccattgaaacagag
aagatgattgagaaatacgaatctcttgcgtcagaccttctggagtggatcgagcagacc
atcatcatcctgaacaaccgcaagtttgctaattctctggtaggagtccagcagcagctc
caggccttcaacacgtaccgcactgtagagaagcctcccaagttcacagagaaaggtaac
ctggaagtccttctgttcacgattcagagcaaaatgagagccaacaaccagaaagtctac
atgcccagagagggcaagcttatctcagacatcaacaaggcctgggagcgtctggagaag
gcagaacatgagcgtgagctggccctgaggaacgagctgattcgtcaggagaagctggag
cagctggcacgtcgcttcgaccgcaaggcggccatgagagaaacctggctcagcgagaac
cagcggctggtgtcacaggacaacttcggcttcgacctccaggcagtggaggcggccacc
aagaagcacgaagccatcgagacggacatcgcagcctacgaggaacgtgtgcaagctgtg
gtggctgtggctaaagagctggaagcggagaactaccacgacatcaagcgcattgcggca
cgtaaggacaacgtgctgcggctctgggactatctactggagctgctgaaggcgcgcagg
cagaggctggagatgaacctgggcgtgcagcgtgtcttccaggagatgctctacatcatg
gactggatggatgagatgaagatgctactgctgtctcaggactacgggaagcacttgctg
ggagtggaagatctgctgcagaaacacgctctggtggaggctgatatcgccatccaggcc
gaccgcgtgcgggccgtcaattccaccgcccagaaattcgctgttgatgatgaaggttac
aagccgtgtgatccgcaggtgatccgtgatcgggtggctcacctggagttctgctaccag
gagttgacgcagttggcggctgagcgacgtgcacgtctggaggagtctcgccgtctctgg
aagtttttctgggagatggctgaggaggagggctggatccgtgagaaggagcagatcctg
tcgtcagacgatgttggcaaggacctgacaggtgctgtgcgtttgctgagtaagcaccgg
gcgcttgaggacgagatgagtggccgagccgggcacctgcagcacacggtgcgtgagggt
caggccatggctgacgccggacactttggagaggccaagatccgcgagcgcgtggctgat
gtgcaggctcagtgggcggcgctggagcaactcgctgcagtccggaaggcacgtctagag
gaggcctgcagcttgcaccagttccaggctgatgccgatgacgtggatgcctggatgctg
gacgcgctgcgcatcgtttcaagtgacgatgtcggccatgacgagttctccacgcaggca
ctggttaagaagcacaaggatgcagcagccgaggtggccagctaccgacccgtgatcgac
tcactccacgagcaggctcaggcactgcccgatgagctggcccattcagtcgacgtcagc
ggacgcctggcgggcatcgaggagcgctataaggagttgacagagctcacccggctgagg
aaacaggctctgcaggatgcactggctctctataagatgttcagtgaggctgacgcctgc
gaggtgtggatcgacgagaaggagcagtggctcaacagcatggagattccagagaaactg
gaggacctggaagttattcagcacaggttcgagagtctggagcctgagatgaataaccag
gcgtcccgcgtcgctgtggtcaatcagatcgcccggcagctgattcacagtggacacccc
agcgagaaggacatcaaggctcagcaggacaaactgaacaccaggtggagccagttcaga
gacttggtggaccagaagaaggagtccctgaactcggcactgggtgtccagaactatcac
ctggactgcaacgagaccaagtcgtggatccgcgagaagaccaaagtgatcgagtccact
caggacctgggtaacgacctgacaggagtcatggcactgcagcgcaagctgacggggatg
gagcgcgacttggccgccatcgaggccaagctgggtgacctgcgtggagaggcagagcgt
ctggcagctgagcatcctgaacaagccaaggctatcacggacaggctggcggagatcggc
accgtctgggaggagctgaaggacacactgcaaaaccgggaggcctctctgggtgaagcc
agcaagctgcagcagttcctccgccagctggatgacttccagtcgtggctgtctcgcaca
cagacggccatcgcttctgaggacatgcccaacaccctggccgaggctgagaagcttctc
gcccaacacgaaggcatcaagcacgagattgacaactatgaagaggactaccagaagatg
cgggacatgggcgagatggtgacccagggccagacggacgcccagcacatgttcctaagg
cagcggttgcaggcgctggacaccggttggaatgagctgcataagatgtgggagaaccgt
cagaacctcctgtctcagtctcacgcctaccaactgttcctcagagacactaagcaggcc
gagaccttcctcaacaatcaggaatatgtgttggcccacactgagatgcccaccactcta
gaaggagcagaagctgctattaagaagcaggaggacttcatgaccacaatggacgccaac
gaggagaagatcaacggcgtggtggaagccggacgcagactggccagtgacggaaacatc
aacgctgagaagattcaggagagagcaacttccattgatgacagacataagaagaaccgt
gaggcggctgtggagctcctgatgagacttaaagacaacagagacctacagaagttcctg
caggactgccaggagctgtctctgtggataaacgagaagatgctgacggcgcaggacatg
tcgtacgacgaggccagaaacctgcacagcaagtggctcaagcaccaagccttcatggct
gagctccagtccaacaaagagtggctggataagattgagaaggaagggatgcagctggta
tcagagaagcctgagacggaggccgtggtgaaggagaagctggcggtgctgcagacgcag
tggcaggagctggagtccaccacgcagaccaaagcgcagtgcctgttcgacgccaacaag
gccgagctgttcacgcagagctgcgccgatctcgacaagtggctggcgagtctggagggt
cagatccaatcagacgactacggcaaagatctaaccagcgtcaacatcctgctgaagaaa
caacagatgctggagaaccaggtggaggtgcgtaagagggaggtagaggaactccagtct
caggctcacgtgctgcggcaggagggcaaggacacggacgaggtggatgggcggcgtgag
gtggtggagaagaagttccaggagctgctcgatcctcttcagaagaggaagaacttcctc
acggcttccagggagatccaccagttcaaccgtgacgtcgaggacgaaatcctctgggtt
gaagagaggatgcctctcgctacttcaacagaccatggccacaacttacaaactgttcag
atgctaatcaagaagaaccagaccctgcagaaggagatccagggccaccagccacgctgt
gatgacatcttcgagcgcagccagagcatcgtgactgtggacagcccgagtgtggaggcc
atcagagcacgtcttgctgagctacaggacctctggaacctcctcatccaggaaacagcg
aagaggcacgagcggctggaggaggcccatcaggcacagcaatactactttgacgcggcc
gaggcggaggcctggatgagcgagcaggagctttacatgatgtcagaggagaaagctaag
gatgaacagagctctgtggccatgctgaagaaacaccagatcctagagcaggcggtggag
gactacgccgagaccgttcatcagctctccaagaccagccgcggtctagtggctgacaat
caccctgagagtgagagaataggcatgcggcagtcgcaggtggataagctgtacgcagga
ctgaaggacctttcagaggagaggagaggaaaactggacgagaggttccgcctcttccag
ctgaaccgcgaggtggacgatctggagcagtggattgctgagagagaagtggtggcagga
tctcacgagctgggccaggactacgagcacgtcactatgctgcaggagcgtttccgtgag
ttcgcccgcgacaccggcaacattggtcaggaacgtgtggacggtgtaaaccggatggcc
gatgagctcatcaacgccgggcatgctgacgctgcaaccgttgccgagtggaaggacggg
cttaacgaggcctgggcggatcttctggagctgatcgacactcgcacgcagatcctggcg
gcttcctacgagctgcataagttctaccacgacgtcaaagagatcctgagccgcatcctg
gacaagcacaagaagcttccggaagagctcgggcgagaccagaacacagtggaggcactc
cagaggatgcacaccacctttgaacacgacatacaagcactggggacacaggtcaggcag
ttgcaggaagacgcgacacgtttgcagtcggcgtatgccggcgataaggctgacgatatc
cagcggagggagagtgaagtcctggacgcatggcggaaccttctggaagcgtgtgaaggg
cggagggcgcgtctgctcgacaccggagacaagttccgcttcttcaacatggtgcgtgac
ctcatgctctggatggaggacgtcatccgcctcatcgaggcccaggagaaacccagggac
gtgtcctctgtggagctgctcatgaacaaccaccagggcatcaaggccgagatcgacgca
cgtaacgacagcttcaccgcctgcatcgagctgggcaagtctctgctggcacgcaaacac
tacgcatcagaggagattaaagaaaagttgctacagttgacggacaagaggaaagaaatg
attgacaaatgggaggacagatgggagtggctaagactgattttggaagtgcaccagttt
tcgcgggacgctggggtagccgaggcgtggttgctgggtcaggagccgtacctgtccagt
aaggaggtgggtcagagtgtggacgaggtggagaagttgatcaagaggcacgaggcattc
gagaagtcagccgctacctgggaggaacgcttctctgctctggagaggctgactacgctg
gagttactggaagtgagaagaaggcaagaagaagaggaaagaagaagaaaacctccgacg
ccagagccggagcaggagatcgagccacagcagagagaaggagagcagatcgctcagaac
ggactgccgtcagaccaggaatccccacgggacggagtggacggagaaatcgtgaacggc
gtgcctgagaggagctctaaggagccgagtcccgtcccgtccccgagctcaggcagacgc
gctaagggcagccaatcgtccaccctgccggccaaaagtcaggagtctccctccgcccag
ctggagggcttccttcaccgcaagcatgagtttgagggccacaacaagaaggcatccaac
aggtcctggcataacgtgtactgcgttatcaacaaccaagagatgggcttctacaaagac
aacaagaacgccgggcagggcatcccgtaccacaacgagatccccgtcagcctgaaggac
gccgtctgcgaggtggccgtcgactacaagaagaagaagcacgtcttcaaactgagagtg
acaaacggaaacgagtatctcttccaagccaaagatgatgaggagatgaacacatggatg
caggctattcagaatgcagtcagtggctcctccccttcagacaagtctgacgttacgcct
agcaaccagagcactcctgcctccagccgcgcccacacactaccggcaactgtcaccttg
acgactgagtcgagcccgggcaagcgggagaaggacaaggagaaagacaaagagaagcgt
ttcagtctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
