Pangasianodon hypophthalmus (striped catfish): 113536539
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Entry
113536539 CDS
T05759
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113536539 (fxr1)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113536539 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
113536539 (fxr1)
mRNA cycle factors
Stress granule specific factors
113536539 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
Tudor_FRX1
KH_9
KH_1
Agenet
FXR_C3
FXR_C1
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
113536539
NCBI-ProteinID:
XP_026786334
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MDELTVEVRGSNGAYYKGFVKDVHEDSLSISFENNWQPERQVPFSEVRLPPPADVKKEIC
EGDEVEIYSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPLNLNKA
VTRNTFYKCTVPVPDDLKAACENELAHKDFKKAVGASRIVYNPQTCELLILSVNEVTVKR
VSLLSDMHLRSIRTKLKLMYWNEEATKHLESTKQLASAFQEEFTVREDLMGLAIGSHGTN
IQQARKIPGVTAIELDEESGTFRIYGETAEAVQKARSYLEFLEESVQIPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDNNLPRQEGMVPFTFVGTKESIGNIQVLLEYHIAYLNE
VEQLRLERLQIDEQLRQIRPVPAHSTEKDKEKSYKMDESVSAVSLHSGRSYTGRGRARRT
ANHNSAYGTNSEHSYNSETDSERRDELSDFSLREDEDERGIQPRDSRRRAGGVRGRGGMG
VRGRGAGRGSGSTMSSVLKDPDRNPYSILDTSESDQTADAEASECEPSSRSRRSRRRRPE
SEDNTSLSENGLDEHEFKPPRQNRSRRRRIRPPEERQPVTVADYISRAESHSRQRMPQEL
KKNKKDLGQVDVISEHGVSQQLTNGPDANTDEQKKAPGASTETAPSGKTDVVKPTVVNGL
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactgacggttgaggttcgcggctccaatggagcttattacaagggcttcgtt
aaagatgttcatgaggactcgctctctatctcattcgaaaacaactggcagccggagaga
caggtcccgttcagtgaagtgcgcttgcctcctcctgctgacgtgaagaaggagatctgc
gagggagatgaggtggagatctactcgagggcgaacgagcaggaaccgtgtggctggtgg
cttgcaaaagtgcgcatgatgaagggagatttctacgtgattgagtacgcagcctgtgac
gccacgtacaacgagatcgtcacgttcgagcgcctccgacccctgaacctcaacaaagct
gtgacgagaaacaccttttacaagtgcactgttcctgttcctgatgatctaaaggctgct
tgtgagaacgagctcgctcataaggactttaagaaggctgtaggagcaagcaggatcgtc
tacaaccctcaaacctgtgagctgctcatcctgtctgtaaacgaggtgacagtgaagaga
gtgtctcttctgagcgacatgcacttgaggagcatccgcactaaactcaagctcatgtac
tggaacgaggaggcaacaaagcacttagagagcacgaagcagctagcgtcagcattccag
gaggagttcacggtgcgagaggatctgatgggtctcgccatcggcagccacggcacaaac
atccagcaggccaggaaaattccaggagtgacggccatcgagctggacgaagagagcggc
acgttcaggatttacggagagaccgctgaagccgtccagaaagcaaggagctacctggag
ttcctggaagagtcggtacaaattcccagaaatctagttggcaaggtgatcggtaaaaat
ggcaaagtcattcaggagatcgtggataaatccggggtggtgcgcgtacggatcgaagga
gacaatgacaacaaccttcccaggcaagaggggatggtgcccttcacgtttgtcgggaca
aaggagagcattggaaacattcaggttcttctggagtaccacatcgcgtacctgaacgag
gtggagcagttgaggttggagcggctgcagatcgacgagcagctgcgtcagatccgccct
gttccagcacattccactgagaaagacaaagagaagagctacaagatggacgaaagcgta
tccgctgtctcgctgcactctgggcgctcctacacgggccggggacgtgcacgcaggacc
gccaaccacaactcagcctacggaacaaactcggagcactcatacaactcagagacggat
tctgagaggcgagacgagctgagtgacttctctctaagagaagacgaggacgagcgcggc
atccagcccagggacagcagaaggagagctggaggggtcagaggtcgtggtgggatggga
gtcagaggtcgcggggctggaagagggtcagggagcaccatgagctcagttctgaaggat
ccagaccggaatccgtacagtattttggatacctctgagtcggatcagactgctgatgca
gaagcgagcgagtgtgaaccgagttctcggagccgacgctcgcgccgccgacgccctgaa
tccgaagacaacacatcactcagtgagaatggcctcgatgagcatgaatttaaacctccg
cggcaaaatcgcagccgtcgccgacgcattcggcctccagaggagagacagccagtcacc
gtggccgattacatatcacgtgctgaatcccacagcaggcagagaatgccacaagagctg
aagaagaataaaaaagacttgggtcaggtggacgtcatatctgagcacggcgtctcccaa
cagctcactaacggccctgacgctaacactgatgagcagaaaaaggcaccaggcgcttcc
acagaaacggcccccagcgggaaaaccgatgtggtcaagccaaccgtcgttaacggactc
tcctaa
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