Pangasianodon hypophthalmus (striped catfish): 113536590
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Entry
113536590 CDS
T05759
Symbol
trim66
Name
(RefSeq) tripartite motif-containing protein 66
KO
K12032
tripartite motif-containing protein 66
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113536590 (trim66)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113536590 (trim66)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
ANCHR-like_BBOX
Translin
DUF745
Motif
Other DBs
NCBI-GeneID:
113536590
NCBI-ProteinID:
XP_026786426
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MEKCCSECPEPRMAQSLCTFCNKWLCFQCTDLHQHERVLAAPPPESRHHPSVSSPTAPSE
PGSACCGRAVVMCPLHKQELLELFCETCDLLACSICHLSAHKDHRLVHVGKALQDQRWLL
ENLMARVEEKRSAVENTAKQIQGRLHSVKITQRKAENQIKMAKMIMMNELNKRANLLIEQ
LESISSGFKQHLEDQLQGAIELCSQLEHVQNFITWAVAHHRRNPLLFSKELIALQMQQLL
EPLIHSETWAPLKIKFNWDASFWTKQISTLGQLSVEGGSRSYSEGVGRPGILRPQPVPCV
SVPSLCYPLREADCSYQSFCQHQLCCLHCRPAPSVPLEKYPLPLDKYSVPHAQEPSCSSP
PSLQRRWNSDATAQVHPSQNSTLPQSLQRSPDPDPVKHAAASDFQPQSSRGRPTDQEIFP
EKQLEGPAGVECSEDRLSAQADEDVRTPGPSDMLVQDGGCGANAESPESRTAVCSISAEP
GSSGSASYESRSLGVNQSAGTAAGEQDHTAQRPEYTSPTERISDDVMIRFHPDSRDGSSQ
TVYKTEPDNAYAYSYGNTSCMSPNKYSIPRQVQDTSRKAPEGSKVPVVCLERLKILVSRC
PPQGHHSTAPPADSRLKCEGVASQELDRELSAEEESVEEPGQRLEVCQVPSEPLLAEHLP
CSAPPVDSESSLQELRNQSEEFSAPSTAPAQSSDPELSKPPESEPASDPNPAEPRSVPAS
DSQLESTAEADSGSDAELESELQVESVPSSTSEPQIESDAESDLESEQVLELSGESTQEL
ESDPDSTAEVTLNLEQECEWEAEQVGADASVQEEVGVVERECVEMENEDFCAVCSIGGEL
LCCDRCPKVFHLTCHVPSLLSFPTGDWVCTLCRDVQRPEVEYDCEESRLPPHTPPSALSP
CDLRKCEKLTLLIYSNILSAPFHEPVSPLARHYYQIIKRPMDLSVIRSRLKRSSSAHYSS
AGEFVSDVLLMFKNCAKFNYPDSEVAQAGHSLQNFFLSKLSEVFPELSCPAPDDDSDSDD
YEEPECAAAVAFPWPERREHSHRKRKRRRSLSWRRHHY
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtgctgttctgaatgtccggagccgcgaatggcccagagtttatgcaccttc
tgcaacaagtggctgtgtttccaatgtacagatctgcaccagcacgagagagtgttagca
gctccaccacccgagtctcggcaccacccgagcgtcagcagtcccacagcaccatcagaa
ccaggttcggcttgttgtggccgtgcggttgtcatgtgtccactccataaacaggagctt
ctggagctcttctgtgagacgtgtgaccttctggcctgcagcatctgccacctgtctgca
cacaaggaccatcggctggtccatgttggcaaggctttacaggatcagcggtggctcctg
gagaacctgatggctcgggtggaggagaagagatcagctgtggagaacactgccaagcag
attcagggcaggcttcacagcgtaaagatcacacaaaggaaggctgagaaccagattaaa
atggccaagatgatcatgatgaatgagctgaacaaacgggccaacctattaatagagcaa
ctggagagtatctccagcggttttaagcagcatctggaggaccagctgcagggggcgata
gagctctgtagccagctggagcacgtgcagaacttcatcacctgggcggtggcacatcac
aggaggaacccgctgctgttcagcaaagaactgatcgctcttcagatgcagcagctcctg
gagccgctgatacactccgaaacctgggcacctctcaaaataaagttcaactgggacgcc
agcttctggaccaaacagatctccactctgggtcagctcagcgtcgagggaggcagtcgc
tcgtactcggagggtgtgggtcggcccggtatcctgagacctcagcctgttccttgtgtg
tccgtgccgtctctgtgttatccgctccgagaggcagactgcagctatcagtccttctgc
cagcaccagctctgctgcctgcactgcagaccggctccgtctgtcccgctggagaagtac
ccacttccactggacaagtattcggtaccgcacgctcaggaacccagctgcagttctcct
ccgagcctgcagaggcgctggaattctgatgctacggcccaagtgcatccatcccagaat
tccacgctgcctcaatcactgcagcggagcccagatccagacccggtgaaacacgctgct
gcgagtgattttcagccccagagcagccggggacgtcccacagatcaggagatcttccca
gaaaagcagcttgaaggtccagcaggtgtggagtgcagtgaggatcgtctctcagcgcag
gcagatgaagacgtgagaacccccggaccctcagacatgctggtacaggacggaggatgc
ggcgctaacgccgagagcccagagagcagaaccgcagtgtgcagcatctcagcagaaccg
ggatcatcaggcagcgcttcatacgaatcccgttctctcggggttaatcagagcgcagga
acggcggccggggagcaggaccacacggcacagcggccggaatacacgagtcctactgaa
cgaatttcagacgatgtgatgatccggtttcatccagacagccgtgatggttcttctcag
acagtctacaagactgagccagataatgcctatgcatattcttatggaaataccagctgt
atgtctccaaataaatacagcataccaagacaagttcaggacaccagcagaaaagctcct
gagggttctaaggtcccggttgtgtgtctggaacggctgaagatcctggtgtccagatgt
ccaccacagggacaccacagcacagctcctccagctgactccagactgaagtgtgaaggg
gtcgcgtcccaggagctggacagagaacttagtgctgaggaggaatccgttgaagaacca
ggacagagattggaggtgtgtcaggtgccaagtgagccactgttagcagaacatcttcca
tgcagcgcaccacctgtggattcagagtcatcattacaggagctacgcaaccagagcgag
gaattttcagcacccagtactgcaccagcccaatccagcgatccggaactttccaaacca
cctgaatctgaacctgcctccgaccccaatccggctgaacccagatcagtgccagcgtct
gactcgcagctcgaatccacggcggaagctgactccggctcagacgcagaactggaatct
gaacttcaagtagaatcagttcctagctctacatctgaaccacaaatcgaatcagacgca
gaatcagacctggaatctgagcaggttctggagctctccggagagtccacgcaggagctg
gaatcggatccagactccaccgctgaagtgactctgaacctggagcaggagtgtgaatgg
gaggcggagcaagtcggtgcggacgcaagcgtgcaggaggaggtgggcgtggtcgagcgt
gagtgtgtggagatggaaaacgaggacttctgcgccgtctgctccatcggaggcgagctg
ctgtgctgcgatcgctgccccaaggtcttccacctgacctgccacgtgccctctctcctc
agctttcccacgggcgactgggtgtgcactctgtgcagagacgtgcagcggccggaggtg
gagtacgactgcgaggagtcccggctgcccccacacaccccgccatctgcactgtcacca
tgtgacctgaggaaatgtgagaagctcacgctgctcatctacagcaacatcctgagcgct
ccgttccacgaacccgtcagcccactggctcgtcattattatcagatcatcaagaggccc
atggacttgtctgttatccggagcagactgaagagaagcagctcggctcactacagctcc
gccggagagttcgtgtctgacgtcctgctgatgtttaaaaactgtgccaagtttaactac
ccggattcagaagtggctcaggccggccacagtctccagaacttcttcttgtccaagctc
agcgaggtttttcctgagctcagctgtcctgctcctgacgacgactcggacagcgatgat
tacgaagagcccgagtgtgcggccgccgtcgccttcccctggcctgagaggagagagcat
agccacaggaagaggaagaggaggcgctcgctcagctggaggagacatcactattaa
DBGET
integrated database retrieval system
