KEGG   Pangasianodon hypophthalmus (striped catfish): 113536671
Entry
113536671         CDS       T05759                                 
Symbol
snrpa1
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113536671 (snrpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phyp03041]
    113536671 (snrpa1)
Spliceosome [BR:phyp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113536671 (snrpa1)
 Complex B
    113536671 (snrpa1)
 Complex C
   U2 SnRNP specific factors
    113536671 (snrpa1)
SSDB
Motif
Pfam: LRR_9 DHU1_N LRR_8 LRR_4 LRR_14 LRR_NXF2
Other DBs
NCBI-GeneID: 113536671
NCBI-ProteinID: XP_026786570
LinkDB
Position
Unknown
AA seq 286 aa
MVKLSAELVEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTIDFSDNEIRKLDGF
PLLRRLKTVLMNNNRICRIGENLEHSLPNLKELILTSNNIQELGDLDPLASVKTLTLLSL
LRNPVTNKKHYRLYVINKLPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAKRTKT
FTPGAGLQAEKVKTGPSAADVEAIKAAIANATSLAEVERLKGMLQSGQIPGRESRQGAQS
MVEEEEEDEPEVGMQESVSMYSAAGGDEMEDDGVENGEEDMHVNGS
NT seq 861 nt   +upstreamnt  +downstreamnt
atggtgaaactgtcggcagagttagtggagcaagctgctcagtacactaatccagtccga
gacagagaactggatctccgaggttataaaatcccagttttggagaatctcggtgccact
ctggatcagtttgataccatcgacttttccgataatgagatcagaaagctggacggattt
ccgctgctcaggagactcaaaactgtgctgatgaacaacaaccgcatctgccggatcggt
gaaaatctcgagcattcgttgcctaatctgaaggaactgatccttacaagtaacaacatc
caagagctgggtgatctggatcctctcgcttcagtaaagaccttgacacttctcagtctc
ttaaggaacccagtaaccaacaagaagcattacaggctgtatgtcatcaacaaacttcca
cagatacgcgttctggatttccagaaggtgaagttaaaggaacgtcaagaggctgagaaa
atgttcaaaggcaaacggggcgctcagcttgcaaaggatattgccaagcgcacaaaaacg
ttcacgccaggagccggactgcaggctgagaaagtgaagacggggccttctgcggctgac
gtggaagccattaaggctgccattgcaaatgccacatcgctggctgaggtggagaggttg
aagggaatgttgcagtcagggcagatccctgggagagaaagcagacaaggtgcacagagc
atggttgaggaagaagaggaagatgagcctgaagtggggatgcaggagtctgtgtcgatg
tacagtgctgccgggggagatgagatggaagacgatggagtggaaaacggagaggaagac
atgcatgtgaatggatcgtag

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