Pangasianodon hypophthalmus (striped catfish): 113536689
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Entry
113536689 CDS
T05759
Symbol
lama2
Name
(RefSeq) laminin subunit alpha-2
KO
K05637
laminin, alpha 1/2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04510
Focal adhesion
phyp04512
ECM-receptor interaction
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113536689 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113536689 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113536689 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_II
Laminin_I
Laminin_EGF
Laminin_B
Laminin_G_3
ApoLp-III
Zw10_N
Motif
Other DBs
NCBI-GeneID:
113536689
NCBI-ProteinID:
XP_026786601
LinkDB
All DBs
Position
Unknown
AA seq
2012 aa
AA seq
DB search
MGAVTQQCNVNTGCCFCRDQFTGEKCNECKLGYRNFPHCVSCDCSLSGSNTETCDAEAGV
CACAERTGQCSCKLNVEGLRCEVCKVGTFGLSVRNPLGCSRCYCFGLSTSCTEAQGLIRM
RLTLMPEQTVLPLVDKDNTKEITFGVTFQYPEIIANAEVIRQELAEPYYWKLPKQFRGSM
ITAYGGKLKYTIYYEARDETGHASYEPQVIIRGGANRDRVMIRHMVEPQIGQLTRHEIDM
TEHEWKHQDNKPMSREDFMDVLFYVDYVFIRASHGNVMRQSRISEISLEVAEEGRPSVES
ERAHQIEKCECPLGYSGLSCEECAAGFYRLSSRVSGSVFRSGMGSCVRCECNGHSSSCDP
DTSVCKNCQHNTEGEKCERCSAGFYGVVRGSPDDCKRCACPLTNPGNNFSPACVTEGFND
YRCTACPEGYEGKYCERCATGYHGDPRRPGGRCEECECDRVGAMPVPCDTHTGACQCRPG
ATGLKCDRCMERHVCGSAGIVSCDDDCAGLLIRDMDRLLRLISGANLTLPLPPPYGALYR
VENMTDELKHMLSPHRAPERLLQLADSNLGSLVTEMDELLSRATKVSADGEQTDTDAERS
HKRAEDLELFVKNTLHAAEALRDKARELNATLGRRDGGVEKSVNEMQEEIKAMIAELRAR
QLTHPHTHTVQEELRAAQDLLMKVQRSFVAPHRVSEELQQEVDAKLRDHNDKLRGAQELL
DEAQNKTGRARTLNSDNLRRLEELRILMSDLEDVVKDVILAEAKNLSFNATAAFNAYSNI
KNYIEEADKAAKQAKATATEAVQLATGPKGALKDEAKGSVQKSHRLWNEAKNLENVVKEN
GDSLGVLQLRLKGADAKNKDLLKGLNENLAMLRAIPNDTAAKLQATKQKAGKANDTAREV
LDRLKDMNQNLMGLNRNYSKLKDDINKANNLIQDPEKNTIIHAAGAKVKDLEDEAERLLE
KLKPIRELQDNLRKNISQIKELINQARKQANSIKVSVSSGGDCIRTYRPDIKKGRYNTII
LNVKTLAADNLLFYLGSAKFVDFLAIEMRKGKVNFLWDVGSGVGRVEYPDLTINDGNWHR
IEASRVGLNGSVSVRPLEGPKAGIVPTLQSAKSPESYTVLDVDQNAYLFVGGMLGSVKKA
DAVKTITFSGCMGETYLDSKPIGLWNYRERDGDCKGCVVSPQPADSEAVVQFDGEGYAAV
SRPIRWNPNSSTVTFKFRTFSTSAVMMYLATKDMKDFMSIELSEGRVKVSYDLGSGTGSA
LSQKRHNDGRWKSLTMTRSKKEGTVIVLDMDSNEEEKLYIDSQGGATGLNLKEDERIYFG
GLPTIGNYSKSRPEVTLRRYAGCMKDIEVSRTPYNLLSSSDYTGLTKGCSIENVHTVSFS
RPGFVELSPMVFDVSSEITLSFSTKNENGIILYGRGGVSTLTHLTQSTQNIQNQNRFQNP
GRKRRQTGEPYVSVQLNKGALEVLVFSGSRNPRRTIRKPDGGILHDGLEHSLRIRRHSGG
SFSVQVDEEERLEQALPNDQPIVIQRLFVGGVPADMAGGLQRPGLPFEGCIWNLLINTIP
MDFSQPVAFENAEIGRCPDVAPPPPPPAPEEEEEEEEEEEEVTPPKLPTDTVKPPPPPST
ATPPADVITVPALPVDAHQTAVSCAAEAEPEVLDLAKQFGLSRNSHMAFDFDDRKVKNSL
IIEFELRTEADSGLVFYMARINHADFATVQVKEGMAHLSYDLGSGNTSVSVPRIISDGHW
HKIKVRRDKQRGILTVDGRYIKHTVSPKKADILDVVGKLYVGGLPLNYTTKRIGPVVYSI
NGCIRNFRMTNGPQDLENPSSSYRVGSCFSKTQSGSYFSGTGYAKAVSTYRVGNDVTVEL
EFRTSSSTGVLLGISGQTMDGLGIELVNGRLSFHADNGVGRVTAVSQGAELCDGQWHSIT
AHKLKHRLELIVDGKKSEAASPDASSASADTNDPVYVGGYPEGLKQFGLTINTPFKGCMR
NIKLIKAGKVLEVQLNKALEIKGVQPLTCPAA
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggtcactcagcagtgtaacgtgaacacaggatgttgtttttgtcgggatcag
tttacgggtgagaagtgtaacgagtgtaagctcggctacaggaacttcccgcactgcgtt
tcctgtgactgctcgctctccggctccaacaccgaaacctgcgatgctgaagcgggtgtg
tgtgcgtgtgctgagaggaccggacagtgctcctgcaagctgaacgtggagggtctgagg
tgtgaggtgtgtaaggtcgggacgttcgggctcagtgtgaggaatccactcggctgcagt
cgctgttactgctttggcctgagcacgagctgcaccgaggcccagggactgatccgcatg
aggctgactctgatgccggagcagacggtgctccccctagtggacaaagacaacaccaag
gagattacgtttggggtgacgttccagtatcctgaaatcatcgctaacgctgaggtgatt
cgtcaggaactcgccgagccgtactactggaagcttcccaaacagttcagaggctccatg
ataactgcgtacggagggaaactgaagtacaccatttattacgaagctcgtgatgaaaca
ggccacgcctcctacgagccacaggtcatcattaggggtggagccaacagggacagagtc
atgatacgccacatggtggagccacagattggtcagctgactcgtcacgagattgacatg
acagagcacgagtggaagcaccaggacaacaagccgatgagccgagaggattttatggat
gttctgttctacgttgattatgttttcatcagagcctcacatggcaatgtcatgagacaa
agcaggatctcggagatctctctggaggtggcagaagagggccggccatcagtggagagc
gaacgagcgcatcagatcgagaagtgcgagtgtcctctgggatactccggcctctcctgt
gaggagtgtgcggctgggttctacaggttgtcctcgcgtgtttctggctccgtgttcagg
tcggggatgggcagctgtgtccggtgtgagtgtaacggccacagcagttcctgtgaccca
gacaccagcgtctgcaagaactgtcagcacaacacggaaggagagaagtgtgagagatgt
tctgctggtttttacggcgtggtacgtggctctcctgatgactgcaaacgttgcgcctgt
cctctcaccaaccccgggaacaatttcagtcctgcgtgtgtaacggagggttttaatgat
tatcgctgcaccgcctgtcctgaaggctacgagggaaagtactgtgagaggtgtgcgacc
ggttaccatggcgacccgcggcgaccaggcgggcggtgtgaggagtgtgagtgtgaccgg
gtcggtgcaatgcccgttccgtgtgacacacacacgggcgcgtgtcagtgccgacccgga
gccacgggcttgaagtgtgaccgctgcatggagcggcatgtgtgtggatcagcgggcatt
gtgtcctgtgacgatgactgtgctgggcttctgattcgagacatggatcggttgctacga
ttgattagcggtgcaaatctgacgctgcccctccccccaccatacggcgctctctaccgc
gtcgagaacatgaccgatgagctcaagcacatgttatctcctcatcgggctccagagaga
ctcctgcagttggcggacagtaacctgggcagcctggtcactgagatggacgagttactg
agccgggccacgaaagtgtcagcagacggagaacagacggacaccgatgccgagaggagt
cacaaacgagctgaagatctcgagctgttcgttaagaacacactccatgctgctgaagct
ctgcgtgataaagcccgtgagctgaatgccactttgggtcggagggacggcggtgtggag
aagagtgtgaacgagatgcaggaggagatcaaggccatgattgccgaactccgcgcacgc
caactcacacacccacacacacacaccgtgcaggaggaactcagggctgctcaggatctc
ctgatgaaggttcagcgcagcttcgtggctcctcaccgcgtctccgaggagctgcagcag
gaagtcgacgctaaactgcgagatcataacgacaaactgcgcggagctcaggagctgctg
gacgaggctcagaacaaaacgggacgcgctcgaacgctgaacagcgacaacctgcgcaga
ctggaggagctgcggattttgatgtctgatcttgaagatgtggttaaagatgtcatcctg
gccgaggccaagaacctctccttcaatgccacggccgcgttcaacgcctacagcaacatc
aagaactacattgaagaggcggataaagcagccaagcaagcgaaagctacagctacagag
gctgtgcagctggccacgggaccgaagggcgctctgaaagatgaggctaagggctcggtg
cagaaaagccaccgtctgtggaatgaggcgaagaacctagagaacgtcgtgaaggagaat
ggagatagtttgggggttctgcagctacggctcaaaggcgctgatgccaagaacaaagac
ctgctgaagggcctgaacgaaaacttggcaatgctccgagccatccccaacgacacggcg
gctaagctccaggccacaaagcagaaagcaggcaaagcgaacgacacagcgcgtgaggtt
ctggatcggctcaaagacatgaaccagaatttgatgggcctgaatcgcaactacagcaaa
ctgaaggatgacatcaacaaagccaacaacctcatccaagaccctgagaaaaacacgata
atccatgcagccggtgctaaagtgaaggatctggaggatgaagccgagcgtctgttggag
aagctgaagccgattcgagagctgcaggacaacctgcggaaaaacatctctcagattaaa
gagctcattaatcaggctcgcaaacaggccaactctatcaaagtgtccgtgtcgtccggg
ggagactgtatccgcacctacaggccggatattaagaaaggccgctacaacaccatcatc
ctgaacgtgaagacgctcgccgcagataacctcctcttctacctcggctcggccaaattc
gtggatttcctggcaatcgagatgaggaagggcaaggtgaacttcctgtgggacgtgggg
tcaggggtcggccgagtggagtatcccgacctcaccattaacgatggaaactggcacaga
atcgaagcctcgcgtgtgggtctgaatggcagtgtttccgttcggcccctcgagggcccc
aaagcgggcatcgtacccaccttgcagagtgccaagtcaccggagagctacacggtgctg
gatgtggatcagaacgcttacctgttcgtgggaggaatgttgggcagtgtaaagaaagca
gacgcggtgaagaccatcacgttctccggctgtatgggagagacgtacttggacagtaaa
ccgatcggattgtggaactacagagagagagatggagactgtaaaggatgcgtggtcagt
cctcagcctgctgactctgaagctgtggttcagtttgatggcgagggttacgctgctgtc
agtcgtccaatcagatggaaccccaacagttccacagtgacgtttaagttccgcactttc
tccaccagcgctgtgatgatgtatcttgccaccaaggacatgaaggactttatgagtatc
gagctgagtgagggtcgtgtgaaggtcagctatgatcttggttctggtactggctccgcc
ctcagccagaaacgacacaatgatggacgatggaaatctctcaccatgactcgctccaaa
aaagaaggcactgtgatcgtcctggacatggacagcaacgaggaggagaaactttacata
gactctcagggaggagcgacaggtctcaacctgaaggaggatgagaggatctactttggt
ggtttacccaccatcgggaactacagcaaatccaggcctgaggtgaccctgaggagatac
gccgggtgtatgaaggacattgaagtttcccgaacgccgtacaacctcctaagcagctca
gactacaccggactaaccaagggctgcagcatagagaacgtccacacagtcagtttctcc
aggcccggctttgtggagttgagtccgatggtgtttgatgtcagctcggagattacgctg
tccttcagcaccaagaatgaaaacggcatcatcctgtacggccgaggcggagtgtccacc
ctgacccacctgactcagagcacacagaacatccagaaccagaaccgtttccagaaccca
ggccgcaaacgcaggcagaccggagagccgtatgtgtcagtgcagttgaataagggagct
ctggaggtgctggtgttcagcggcagtaggaaccctcgccgcaccatcagaaaacctgat
ggagggattttacatgacggacttgagcactcactgcgcatccgccggcactcaggaggc
tcattctcagtgcaggtggacgaagaggagcgactggagcaggcattacccaatgatcag
ccaatcgttatccagaggctgtttgtgggcggagtcccggctgacatggcaggtggcctg
cagagacccggcctgccgtttgagggctgcatctggaaccttctgatcaacacgatcccc
atggacttctcacaaccggtggccttcgagaatgcagaaattgggcggtgtcctgatgta
gccccgccccctccacctccagctccagaagaagaggaggaagaagaggaagaggaagag
gaagtgaccccacccaaattacccactgatacagtgaaacctccgcctccaccttccact
gccacgcctcctgctgatgtcatcaccgttcctgccctgcctgttgatgcccatcaaaca
gcggtgtcctgtgcggcggaggcggagcctgaggtgctggatttagcgaagcagtttggt
ctctcgaggaacagccacatggcgttcgattttgatgacaggaaggtgaagaacagcctg
atcatcgagtttgagctgaggacggaggccgattcggggttggtgttttacatggccaga
ataaaccacgctgactttgccacggtgcaggtgaaggaggggatggctcacctgagctac
gacctcggcagcgggaacacgtctgtcagcgtcccacgcatcatcagtgacggacactgg
cacaagattaaagtgcgtagggataaacagagaggcatcctgacggtagacggccgttac
atcaaacacaccgtgagcccgaagaaagccgacatcctggacgtggtggggaagctgtac
gtggggggtcttcctctgaactacaccaccaagcgcataggaccggtggtgtacagcatt
aacggctgcatcagaaacttccggatgacgaacggcccgcaggatctggagaatccgagc
tccagctaccgcgtcggctcgtgtttcagcaaaacgcagagcggctcgtacttcagtggc
acaggatacgctaaagcagtgagcacctacagagtcgggaacgacgtgacggtggagctg
gagttccgcaccagcagcagcaccggagttctgctcggaatcagcggccagacaatggac
ggactcggcatcgaactcgtcaacggcaggctctccttccacgctgataacggagtgggg
cgtgtcacggccgtctcccagggggcggagctttgtgatggacagtggcattccatcacc
gcccacaaactgaagcaccgtctcgagctgatcgtggacggcaaaaaatcggaagcagcc
agtccagatgctagctccgcctccgctgacaccaacgaccctgtctacgtgggcggatac
cctgagggcctgaagcagtttggtctgaccatcaacactccctttaaaggctgcatgagg
aacataaagctcattaaagcaggaaaagttctggaggttcagctcaacaaagcgctggag
atcaaaggggtccagcctctcacctgtcctgctgcctaa
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integrated database retrieval system
