Pangasianodon hypophthalmus (striped catfish): 113536723
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Entry
113536723 CDS
T05759
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113536723
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113536723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
113536723
NCBI-ProteinID:
XP_026786649
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MNLCDDLMADQRMDISSTMNEFMSPSSTELISSSISTSSMDYTRKRKGSSTDYQDSMDMD
KDKQIGRDCIDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTV
LRMAVQHMKTLRGAANPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSE
SVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTVPRERLIDAKTGLPVKTDIAP
GPSRLCSGARRSFFCRMKSNRPLIKMEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPM
QKGLDEDNEPDNEGCNLSCLVAIGRLHPHIVAQPMNGDIRVKPTEYVSRHAIDGKFVFVD
QRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMRDKINTNCYKFKVKDGSFI
TLRSRWFSFMNPWTKEVEYIVATNTVVSAGTRDGADPSYLQLAASPQSMDSVLTADGSGK
RALQTVPGIPGGTRAGAGKIGRMIADEVMEIQRIRGSSPSSCGSSPLNITNSTPPPDTSS
PGGKKIQNGGTPDIPSAGMVSGQDSIGYPYSNNSLLSDNSHISIGDIMDEPGSSSPSNDE
AAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttgtgatgatctcatggcagaccagagaatggacatctcctctacgatgaat
gagttcatgtctcccagctccacggagctcatcagcagttccatcagcacgtcctccatg
gactacacccgcaagaggaaaggcagctccaccgactaccaggacagtatggatatggac
aaggacaagcaaattggaagggattgtattgatcaacaaggccggataaagaatgccagg
gaggctcacagtcagattgagaagcgacgcagggacaaaatgaacagcttcattgacgag
ctggcttcactagtgcctacctgcaatgccatgtcccgcaaactggacaaactgactgta
ttgcgcatggccgtccagcacatgaaaacgttacgaggtgctgcaaacccttacaccgaa
gctaactacaaaccagcctttctgtcagatgatgaactgaaacacttgatactgagggct
gctgacggctttctctttgtggtcggctgcgatcggggaaagattcttttcgtttctgag
tctgtgtacaagatcctgaactacagccaaaatgacctgattggccagagcttgtttgat
tatttgcatcctaaggacattgccaaagtcaaggagcagctgtcctcgtctgacacggtg
ccaagggagcgactcatcgatgccaaaaccggactgccggtaaaaacggacatcgcgcca
gggccatccaggctgtgctctggggcccgtcgctccttcttctgcagaatgaaaagtaac
agacctctcatcaaaatggaggacaaggacttcgcctccacctgctccaaaaagaaagcc
gaccgcaaaagcttctgcaccatccacagcacgggctatctgaagagctggccacccatg
cagaagggcttggacgaggacaacgagcccgataacgaaggctgcaatctgagctgcctg
gtggccatcggccgtctccacccccacatcgtcgctcagccaatgaacggagacatccga
gtcaaaccgaccgagtacgtctcacgccacgccatcgacggcaagttcgtctttgttgat
cagagggccactgccattctcgcctatctaccccaggagcttctggggacatctttctat
gagtattttcatcaggatgacatcggacacctcgctgaatgccacagacaagtgctgcag
atgcgagataaaatcaacactaactgttacaagttcaaggttaaagatggctccttcatc
actctgagaagtcgctggttcagtttcatgaacccttggaccaaggaagtcgagtacatc
gtcgctacaaacacagtcgtctcggctggtacacgtgatggagctgatcccagctatctc
cagctcgctgcctccccccagagcatggacagtgtcctcacagctgatggttctgggaaa
cgggctctgcagacagtgcctggcattccggggggcacgagagccggagcaggcaagatc
ggccgcatgatagcagacgaggtgatggagatccagaggataagaggctcgtcaccctct
agctgtggctcgagcccgctgaacatcaccaacagcacacctcctccagacacatcttct
cctgggggcaagaagattcagaatggtggaactccagacattccttcggcggggatggtg
tcaggccaggactccataggatacccttactctaacaactcacttttaagtgataactct
cacatcagcatcggggacatcatggacgagcccggctccagcagccccagtaacgacgag
gcggccatggctgtcatcatgagtcttctggaggctgacgcaggactcggaggccctgtg
gacttcagtgatctgccatggcctctgtga
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