Pangasianodon hypophthalmus (striped catfish): 113536771
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Entry
113536771 CDS
T05759
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113536771 (ctr9)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
113536771 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_8
TPR_16
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_10
ARM_TT21_5th
TPR_7
TPR_11
TPR_6
TPR_Slam
TPR_EMC2
ANAPC3
Motif
Other DBs
NCBI-GeneID:
113536771
NCBI-ProteinID:
XP_026786710
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKDLINQSTLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GSLAYYKKALRTNPGCPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHL
ALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMY
VYRRDKENAAQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDD
VEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAK
KYFLASLERAKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYV
DCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERI
LKQPSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAAN
GIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKF
YKYQNTEVLLYLARALFKCGKLQECKQMLLRARHVAPSDTVLMFNVALVLQRLATLVLKD
EKSNLKAVLSAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARA
RKQDEEEKELRAKQDQERELLRQQLLREQEEKRIKEAEEQKKLLEQRAQYVEKTKNLLNF
TDEMKESAKEKKKAGGGGRRKKGAEYDDFVNDDSDEELPLKKKKKKKVPRSGSEQEEEDE
EGEKKPRKKRKRPAKGGDDRSDEDEGSSRPKKQRKPRERKKIEKAKPERLPQSLKGKIKS
KAIISSSDSSSDEDGLKIAEDRGNRDSGSGSEDGGHRKRIASDSESDEERRRSANSEEDE
SGSERPVKKRRPQPQSDSEQSDNESKRSRSDGSEDESRAGSPAPASDQGSENEGSPQRSD
NESEPEGSNNEASNRGSDDDSD
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggatccattgaaatccccctgcgggacacagacgaggtgattgagctggac
tttgatcagcttcctgaaggagatgaagtgatcagtatcctgaagcaggagcacacacag
ctgcacatatggatcgcactcgctctggagtactacaaacaggggaagacggaggacttt
gtgaagctgctggaggcggcgcgtatcgacggaaacctcgactacagagaccacgagaag
gaccagatgacatgtctggacactctcgctgcttattacgtccagcaggctcgcaaagag
aagaacaaggatgcaaaaaaggaccttatcaatcagtcgacgctgctgtacacgatggcg
gataagatcatcatgtacgatcagaaccacttgttgggacgagcctgtttttgcctgctg
gaaggggacaagatggatcaggcagacgcccagtttcacttcgtcctgaaccagtccact
aacaacatccctgcgctgctgggcaaggcttgcatttccttcaacaaaaaggactacaga
ggatctttggcttactataaaaaagctctgcgcacaaaccccgggtgtccagactccatc
aagaacggcgtgcagctgctctccagagcctacaccatcgacccgagcaaccccatggtg
cttaaccacctggccaaccacttctttttcaaaaaggattacagtaaagtccagcatctg
gcccttcatgcgttccacaacacagaggtagaggccatgcaggctgagagctgctatcag
ctggctcgctccttccacgttcaggaggactacgatcaggcttttcaatattactaccaa
gctactcagttcgcctcgtccaccttcgtgctgccgttcttcggcctgggacagatgtac
gtgtatcggcgagacaaagaaaacgccgcgcagtgcttcgagaaggtcttgaaggcgtac
ccgaacaactacgaaaccatgaaaattctcggttcactttacgcaacgtcagacgaccag
gagaaacgagacatcgctaaaggccatctaaagaaggtcactgagcagtatcctgatgat
gtagaagcctggattgaacttgctcagattctagagcagacagacatccagggtgctctg
tctgcatacggcacagccacacgcattctccaggagaaggtacaagctgacgtcccccct
gagatccttaacaatctgggagctctgcacttcagactggggaaccttggagaagcaaag
aaatactttctggcctctctggagagagccaaagcggaaggcgagcacgatgagcattac
tacaacgccatttctgttaccacctcctacaacctggcgcggctctacgaggccatgtgc
gagttccacgaggctgagaagctctacaagaacatcctgagagaacatccaaactacgtc
gactgttacttgcgtctcggagcaatggcccgtgacaaaggcaacttctacgaagcctca
gactggtttaaagaagctcttcagatcaaccaggatcacccagacgcttggtccctgatc
ggaaatctccacttggccaagcaggagtggggtcccggccagaagaagtttgagcgtatc
ctgaagcagccgtctactcagaacgacacgtactccatgctggcgctgggtaacgtgtgg
ctgcagacactacaccagcctacgagggatcgagaaaaggaaaagaggcaccaggacaga
gctttggcaatttataaacaagttctgaggaatgatgctaagaatctgtatgctgccaat
ggtatcggagctgttttggcccacaagggttacttccgtgaagcacgtgacgtgtttgcg
caggtccgggaagccacagcggatatcagtgacgtctggctgaacctggcgcacatttac
gtggagcagaagcagtacatcagcgctgtgcagatgtacgagaactgcctgaagaaattc
tacaagtaccagaacactgaggtgctgctgtacctggctcgagcgctgttcaagtgcgga
aagctgcaggagtgcaaacagatgctgctgagggcccgtcatgtggctcccagcgacaca
gtgttgatgttcaacgtagccttggtgctgcagcggcttgccactctggtgttgaaggat
gagaagagcaacctgaaggccgtgttgagcgcagtgaaggagctggagctcgctcacagg
tacttcagctacctgagtaaagccggagacaagatgagattcgacttggcactggctgca
agtgaagcaaggcagtgctctgatctgctgagtcaggcgcagtaccatgtggcccgtgcc
cgtaaacaggacgaggaggagaaggagctgcgagccaagcaggaccaggagcgagagttg
ctgaggcagcagctgctccgtgaacaggaggagaagaggatcaaggaggctgaagaacag
aagaagctcctggagcagcgagcgcagtatgtggagaagaccaagaacctcctcaacttc
actgatgagatgaaggagtctgcgaaagagaagaagaaagcaggaggcggcggacggcgt
aagaaaggagccgaatacgacgactttgtcaacgatgactccgatgaagagctgcccctc
aagaagaagaagaagaagaaggtacctcgcagtgggagcgaacaagaggaagaagatgaa
gagggagagaagaagccacgcaagaaaaggaagagaccagctaaaggtggagatgacaga
agtgacgaggatgagggcagctcaagacccaaaaaacagcgcaaacctcgagagcgcaag
aagattgagaaggcgaaacctgagcgtctgccgcagtctcttaaagggaagatcaaatcc
aaggccatcatttcctcctcggattcctcttcagatgaggatggtctgaaaatagctgag
gaccgtgggaatcgggacagcggctcgggatctgaggacggaggccaccgtaaacgcatc
gcctccgacagcgaatcagacgaagagcgacgtcgttcagccaactcggaagaggacgaa
tccggcagcgagcggccagtgaagaagaggaggccgcagcctcagtctgattccgagcaa
tcggacaatgagagcaagaggagccgctcggacggttctgaggacgaatcccgggccggt
tctccagcgccagcctcagatcagggctctgaaaacgagggatcacctcagcgctcagat
aatgaatccgagcctgagggatccaacaatgaggcctcaaatcgaggctctgacgatgac
agtgactga
DBGET
integrated database retrieval system
