Pangasianodon hypophthalmus (striped catfish): 113536782
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Entry
113536782 CDS
T05759
Name
(RefSeq) neogenin-like
KO
K06766
neogenin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04350
TGF-beta signaling pathway
phyp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113536782
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113536782
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113536782
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
DCC/UNC5 family
113536782
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
NDNF
Tissue_fac
Fn3_VIN3
C2-set_2
Ig_4
fn3_4
V-set_CD47
DUF4834
EphA2_TM
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
113536782
NCBI-ProteinID:
XP_026786723
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MAERGARVLLSLLCLTSACSLAPARAQKGSVKRHFSPFWFSVEPSDTLAVRGSPALLNCS
VYSELPAKVHWKKDGVLLNPDDRRQVLPDGSLLISSIMHSKHNKPDEGVYQCVATIENLG
TISSRTARLNVAGTPRFSGQPEAASVHLGESWVLSCEVNADLVSFIRWERDKEPVPLDQR
VYTLPSGALVISNATEVDAGLYRCVLENAGPTKNSDEAELQILPETWEVRKLEFLRQPGS
VSRVVGESVLLPCVVSGFPAAYVRWMRDDRVIDDSDNRFELLGGGSLQIFNLTEEDGGIY
SCLADNANDSIEARAELTVQVPPQFLKRPTNTYAHEATDIVFECEATGSPAPTIKWVKNG
DAVVPSDYFRILKEQNLQVQGLVKTDEGFYQCLAENEVGNVQASAQLIILDQATPSPSPT
LIRATADRVTPGSGGSSGSNPGPGLGPGPVPSAPRDVVASLVSTRFIKLTWRLPLEPHGD
DITYSVYYGLEGAKRERTVNTSRPGEMQVTIQNLKPDTKYSFRVVAYNKHGRGESSAPLK
VATQPEVQVPGPAPNFQAVVQTSTSVSLSWDKPLTGNGDIQNYRVYYMEKSLGNEKFLPS
AAPQNMTVEVVNSKSIMVRWQPPPADAQNGEIIDYKIRYKKGTRKSEPLEITSGNQLSKL
IDGLQRGTEYSVRVSAITVNGSGPATDWATAETFESDLDESRVPDVPGSLHVRPLVNSIV
VSWSPPENQDIVVRGYIIGYGIGNPHSQTIKLDYKQRYYNIENLDPSSHYVITLKAFNNV
GEGIPVYESALTRPQTDPIDPDVDLYELFHPPYTPVPDPIPMMPPVGVQASVLSHDTIKV
TWADNSLPKNQKITDARYYTVRWKTNIPANTKFKTANTTNLSHMVTGLKPNTLYEFSVMV
TKGRKTSTWSMTAHGTTLEATPSSAPKDVTVVSKEGRPRTIIVNWQPPSEANGKITGYII
YYSTDVNAEVHDWVIEPVVGNRLTHQIQELTLDTAYYFKIQARNSKGMGPMSEAVQFRTL
KAESSDKMANDQASGIPGKPGRAATLDPGIGKSGMPGSENHILVIVIIVSVGGFIIIALV
VGALLCSRRSTSQQKKKRAACKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEP
NPVMTDTPIPRSSQDITPVDGTMDPILQRRNSYRGHESEESMSTLAGRRGMRPKMMMPFD
AQPPQPVISAHPIHSLDNHHHHYHLGSLASPTHNYLQHTSSPRPLTSSISYLDRAESPES
VRNTPTTDLLPASAQPSCSIDHSETDISYHSSAAEDEPSYNPPTAHVRPTHPLKSFAVPS
VPAHGSTYEGVALPNTPLLSQTGPHSVKTASIGTLGRTRTPMPVIVPNAPDVPDSSRMLE
ECESKYEKDELSEEMAHLEGLMKDLNAITTA
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcgcgcgtgctcctctctctcctctgcctcacctctgcgtgctcg
ctcgcgcctgcacgcgctcagaaaggctctgtcaagaggcacttcagtcctttctggttc
tctgtggaaccttcggatacgttggcggtgaggggatcccctgcgttactcaactgctcc
gtctacagtgagctccctgccaaggtgcactggaagaaagatggtgttttgctcaaccca
gacgatcgcaggcaggtcctgcccgacggctcgctgctcatcagttccatcatgcactcc
aaacacaacaaacccgacgagggcgtctaccagtgcgtggctaccatcgagaacctgggc
acgatcagtagccgcaccgccagactcaacgtagcaggtacacctcgtttctccgggcag
cccgaggcggcgtctgtgcatctcggggagagctgggtgctcagctgtgaggtcaatgca
gacttggtgagctttattcgctgggaacgtgataaggagccggtgccattggaccagaga
gtgtacacattacccagcggtgctctggtcatcagcaacgccacagaggtggacgcaggt
ctgtaccggtgtgtgctggaaaatgcaggacctacgaagaacagcgacgaggctgagctc
cagatcctgcctgaaacatgggaggtgcgcaagctggagttcctcaggcagccaggctct
gtgtcccgggtggtgggggagagtgtactgctcccctgtgtggtgagcggattccctgca
gcctacgttcgctggatgcgagacgatagagtcatcgatgacagtgacaaccgctttgag
ctgcttggcgggggcagtctacagatctttaacttgaccgaagaggatggtgggatatac
agctgcctcgcggacaatgcaaacgactccattgaagcccgggctgagctcacagtacaa
gttcctccacagtttctgaagagaccaaccaacacttacgcccacgaggctacggacata
gtgttcgaatgcgaggcgactggatcccctgcccccaccatcaaatgggttaaaaacggg
gacgccgtggttcctagcgactatttccgaattctaaaagagcagaatctgcaggtgcag
ggcctggtgaagacggatgaggggttttatcagtgtctagccgagaatgaagtgggcaac
gtacaggccagtgctcagctcatcattctagaccaagccaccccctctccctcacccaca
ctgatccgtgccactgctgaccgtgtaacaccaggctcaggaggcagctccggctccaac
cctggccctggccttggtcctggtcccgtgccctcagccccccgtgatgtagtggcctct
cttgtctccacccgcttcatcaagctgacctggcgcctgccgctcgagccacatggcgat
gacatcacttactccgtctactacggcctggaaggcgccaaaagggagaggacggtgaac
actagccggccaggtgaaatgcaggtcaccatccagaacctcaagccagacaccaagtac
tcttttcgagtggtggcgtacaataagcacggccgtggagagagttcagcgcctctgaag
gtcgccacccagccagaagttcaagtaccaggacctgctcccaacttccaagccgtggtc
cagacctccacttcagtcagcctgagctgggacaaacccctgaccggcaatggcgacatc
cagaactacagagtatactacatggagaaaagccttggcaatgagaagttcctccccagc
gcagcaccccagaacatgaccgtggaggtggtaaactcaaagagcatcatggtgcgatgg
caacccccaccagccgacgctcaaaacggagagatcatcgactacaagattcgctacaag
aagggcacgaggaagagcgaacctttggagatcacctcaggaaaccagctcagcaagctc
atagatgggttgcagcgtggcacggagtactctgtgcgcgtgtcagccataactgtgaac
ggctcaggccctgcaacagactgggccactgctgagaccttcgagagcgatttggacgag
tcccgcgtccctgatgtgcctggttctttacacgtccggccgctggtgaacagcatcgta
gtgagctggtctcctccagagaaccaggacatcgtggttagaggttacatcataggctac
ggaatcgggaaccctcatagccaaaccattaaacttgactacaaacaaagatattacaac
atcgagaaccttgatcccagctcgcactacgtgatcacgctgaaagccttcaacaacgtg
ggtgagggcatcccggtgtacgagagtgccctcacacgaccccagacagaccccatagac
cctgatgttgatttgtacgaacttttccatcctccatacactccagtaccagaccccatt
cccatgatgcctcccgtgggcgttcaggcttcagttctgagccacgacaccatcaaagtc
acatgggctgacaactcgctgcccaagaaccagaaaatcacggatgcgcgctactacaca
gtgcgctggaagaccaacataccagcaaacaccaagttcaagacggccaacaccaccaac
ctgagtcacatggtgacaggtctgaagcccaacactctgtatgaattctccgtcatggtc
actaaaggcaggaaaactagcacatggagtatgacggctcatgggacaacgttagaagcc
acgcccagttcagccccaaaagacgtgacagtggtcagtaaggagggtcgtccacgcacc
atcatagtcaactggcagcctccttctgaagccaatggcaaaattacaggttacattatc
tactacagcactgatgtaaatgctgaggtacatgactgggtgattgagccggtggtgggg
aaccgactcacccatcagatccaggagctgacccttgacacagcatactactttaaaatc
caggctcgcaactccaagggcatggggcctatgtctgaggcagtccagttccgcactctt
aaagctgaatcatctgacaaaatggctaatgaccaagcttctgggatacccgggaaacca
ggccgagccgctacactagaccctggtattgggaaatcagggatgcctggtagtgaaaac
cacatcctggtgatcgtcatcatcgtgtccgtgggaggcttcatcatcatcgcgttggtg
gtgggagctttactgtgctcacgccgctccacctcccagcaaaaaaagaaaagggcagcc
tgcaagtccagcaatggctcgcacaagtacaaaggcaactctaaagacctcaagccacct
gatctttggatccaccatgagcgcttggagctcaaacccatcgataagtcacctgagccc
aatccagtcatgacggacaccccgattccacgttcctcccaggacatcactcctgtagat
ggcaccatggacccgatcctccagagacgcaattcgtaccgtggccatgagtcagaggag
agcatgtctacactggcaggtcgtcggggaatgagacctaaaatgatgatgccctttgat
gctcagccccctcagcccgtgattagcgctcaccccatccattcccttgataaccatcac
caccattatcacctgggcagcctggcctccccgacccacaactatctgcaacacacgagc
agcccgcggcccctcacctcctccatctcttatctagacagggccgagtcaccagagtca
gtgagaaacactcccactacagacctgctgcctgcttcagctcagccctcctgctccatc
gatcactcggagactgacatcagttatcacagctcagcggctgaggacgagccgagctac
aaccccccaacagcacacgtgcgccccacacaccctctcaagagcttcgccgtgccctct
gtgcccgcccacggctccacctacgagggtgtcgctctgcccaacacacccctgctctct
cagacaggtcctcactcggtcaagaccgcctccatcgggacgctgggtaggacgaggacg
ccaatgccagtaatcgtgcccaacgcaccagacgtgccagacagcagcagaatgctggag
gaatgtgagagtaagtacgagaaggacgagctgtcagaggagatggcccacctggagggc
ttaatgaaggacctaaacgccatcacgacggcctga
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integrated database retrieval system
