KEGG   Pangasianodon hypophthalmus (striped catfish): 113536819
Entry
113536819         CDS       T05759                                 
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03022  Basal transcription factors
phyp03420  Nucleotide excision repair
phyp04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113536819 (cdk7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    113536819 (cdk7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    113536819 (cdk7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:phyp01001]
    113536819 (cdk7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phyp03021]
    113536819 (cdk7)
   03019 Messenger RNA biogenesis [BR:phyp03019]
    113536819 (cdk7)
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113536819 (cdk7)
Enzymes [BR:phyp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     113536819 (cdk7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     113536819 (cdk7)
Protein kinases [BR:phyp01001]
 Serine/threonine kinases: CMGC group
  CDK family
   113536819 (cdk7)
Transcription machinery [BR:phyp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     113536819 (cdk7)
Messenger RNA biogenesis [BR:phyp03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     113536819 (cdk7)
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     113536819 (cdk7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Kinase-like Seadorna_VP7 ABC1 Haspin_kinase Pkinase_fungal
Other DBs
NCBI-GeneID: 113536819
NCBI-ProteinID: XP_026786734
LinkDB
Position
Unknown
AA seq 345 aa
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKIKNTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYLHHHWILHRDLKPNNLLLDESGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLAGDSDLDQLTKIFEALGTPTEDTWPGM
TSLPDYVSFKLFPGTPLEHIFSAASDDLLELLKGLFTFNPCTRLTASKALKMQYFSQKPA
PTPGPQLPRPNCSAEALKEKENLAIGIKRKRDGIEQGTLKKKLVF
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggctttggatgtcaagtccagagctaaacgatatgaaaagctggactttctcggagag
ggtcagtttgccacagtttacaaggcgagagacaaaattaaaaataccattgttgcgatt
aaaaagattaaagtcggacacagaactgaggcaaaagatggaatcaacagaacagccctc
agagaaatcaagctgctgcaggagttgagtcatccaaatattattggactccttgatgcg
tttggacacaaatccaacattagccttgtgtttgactacatggagactgacctggaggtt
atcataaaggacacgagtcttgtactgacgccagccaacattaaagcctacatcctgatg
acactgcagggtctggagtacttgcaccatcactggatcctacacagggatttgaagcca
aataatttactgctcgatgaatctggggttctgaaactagctgattttggattggcaaaa
gcctttggaagtcctaacagagtttatacacatcaagtagtgaccagatggtaccgtgcc
ccagagctgctcttcggggccaggatgtatggggtgggagtggacatgtgggcggtaggc
tgcatccttgcagaactcctactccgagttccctttctggctggagattctgacctggat
cagctgacaaagatatttgaagcccttgggactccaacagaagacacttggcctggtatg
accagtctcccagattatgtctcatttaaactgtttcctggaacacctttggagcacatt
ttcagtgcagcgagcgatgaccttttggagctcctgaagggcctgtttacctttaatccc
tgcacacgcctcacagcctcaaaggcactgaagatgcaatatttcagccagaaaccagcg
cctaccccaggccctcagcttccccggcctaactgctcagcagaagctctaaaagaaaaa
gaaaatctagccatcggcattaaaagaaaacgtgatggtattgaacaaggcaccctgaag
aaaaagttggtgttttag

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