Pangasianodon hypophthalmus (striped catfish): 113536876
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Entry
113536876 CDS
T05759
Symbol
nelfb
Name
(RefSeq) negative elongation factor B
KO
K15180
negative elongation factor B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113536876 (nelfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113536876 (nelfb)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
113536876 (nelfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COBRA1
Motif
Other DBs
NCBI-GeneID:
113536876
NCBI-ProteinID:
XP_026786805
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQMENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELREKLMERVAFIAEGKDEDRYHKLEELLEKSFPLVKMPSIQPVVMQVMKHLP
KVPEKKLKQVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEAALFSSDL
SILHNFFSPSPKTRRQGEVVQKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDVSEICSVDPCHKFTWCLDACIREKFVDAKRARELQGFLDSMKKGQEQVLGDL
SMILCDPFASNTLVLSTVRNLQELLSQDALPRDSPDLLLLLRMLCLGQGAWDMIDSQVFK
EPRLELEVVTRFLPAIMSIVVDDYTFTVEQKLPSEEKSSLTYPNTLPDTFTRYLQENRVA
CEMGLYYVLHIAKQRNKNALQRLLPSLVETYNDMAFGDIFLHLLTGHLTLLSDEFGTEEF
CTSVFDNFLLTSSSSKENVHRHTLRLLNHLHQKVHSSSMETLMKTLEPPKQSSEPVKELY
TQLVEKIEASKRSPPEPEEAPTLDLGLHPVTVPTTPTTPL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgggttgcctgagctcggaatatccaatggcgaagatctgaaggaaacttta
acgaactgcacagagcctttgaaagctattgaccagtttcagatggagaacggcatattg
ttgccgacgctgcagtctgcgcttcctttcctcgatcttcacggcactcctcggctggag
tttcatcaatctgtgtttgacgagctccgggagaagctgatggagcgagtcgctttcatt
gccgaaggcaaagacgaggacagataccacaagttggaggaacttctcgagaagagcttc
ccgctagtcaagatgccgtccattcagcctgtcgtcatgcaggttatgaaacacttacca
aaggtgccggagaagaagctgaagcaagtgatggctgataaggagctgtataaagtctgc
gcagtggaggtaaagaggcagatctggcaggataaccaggctctgtttggtgatgaagtc
tctcctttgctcaagcagtacatcgtggagaaagaggccgcgctcttcagcagcgatctc
tccatcctgcataacttcttcagtccttctcccaaaacccggcggcagggagaggttgta
cagaagcttactcagatgattgggaagaatgtaaaactgtatgacatggtgctgcaattc
ctaaggacgctcttcctgcgcacacgaaacgtgcattactgtaccctgcgtgccgagctc
ctcatgtccctgcacgatctggacgtcagtgagatctgctccgtcgatccctgccacaag
ttcacttggtgcttggacgcctgcataagggaaaagtttgttgatgccaaacgagcccga
gagctgcagggtttcttggacagtatgaagaaaggccaggagcaagtgctcggggacctc
tctatgatcctgtgtgacccgtttgccagtaacacactcgtgttgagcacagtgaggaac
ctgcaggagctgctcagccaggacgccttgcccagagacagtccagacctgctgctactc
ctcaggatgctctgtcttggtcagggagcctgggacatgattgacagccaggttttcaaa
gagccacgcctggaattggaagttgttacacgtttcctgccagccataatgtcaatagtg
gtggacgattacacgttcactgtagaacaaaagctccccagtgaagagaagagctccctc
acctaccccaacaccctgcctgacacttttaccagatatctgcaggaaaacagagttgca
tgtgagatgggtctgtattatgtcctccatattgctaagcagaggaataaaaacgctctg
cagaggttgctcccttctttggtggagacgtacaatgacatggcatttggtgacattttc
cttcatctgcttactggccatctgacccttctgtctgacgagtttggcacagaggagttc
tgcacatccgtttttgacaacttcctcctcacgtcctcctccagcaaggagaatgtgcac
agacacactctacgcttgctgaaccatctccaccagaaggtgcactcctcatccatggaa
acactgatgaaaacacttgaaccacccaaacagagcagtgagccggtaaaagagctctac
acacagctggtggaaaagattgaggcgtctaaacggagtccgcctgaacccgaggaagct
ccgaccctggacctgggcctgcacccggtcaccgtccccaccacgcccaccactcctctc
tga
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