Pangasianodon hypophthalmus (striped catfish): 113536882
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Entry
113536882 CDS
T05759
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113536882
04020 Calcium signaling pathway
113536882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113536882
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113536882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
113536882
NCBI-ProteinID:
XP_026786814
LinkDB
All DBs
Position
Unknown
AA seq
2288 aa
AA seq
DB search
MARFEDDLPVRYGGGSPSGAGRGPSRQQGPPGAHRIYKQTMAQRARTMAIYNPIPVKQNC
LTVNRSLFIFSEDNVIRKYAKRVTEWPPFEYMILATIIANCIVLALEQHLPADDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTTVGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRACFRDDTNEQVAEFPCGLDPPARLCENGTTCREYWPGPNFGITNFDNILFAVLTVFQ
CITMEGWVEILYNANDASGNTWNWLYFIPLIIIGAFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSPLDGAWYKRKCNNPVLKR
SKKSKNDLINAEEGEDHFTDISSVAPQGSPFARASVKSSKNESSSYLRRKEKRVRFFIRR
MVKSQGFYWTVLCLVGLNTLCVAIVHYDQPKWLTDALYLAEFVFLGLFLIEMSLKMYGLG
PLNYFHSSFNCFDFGVIVWSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVGSGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEEAISKKLALQKAKEVKEVSPMSAASISLAANYVCSPAHHYLSQEQRRSLKM
MSVWEQRTSQIRKHMRASSEALYHEELNPRLTSTQHLRPDITTHLDRPLVVEPRCDWDKP
RDLRVEAGTPEDPNPQVPPDPLAMDPPQSQPPRKHHHRRRDRTSNEAQENGETGTSRHHV
HHSRSKDTEGTRAKDGKSERSHSRDARGEHRHHRSHRAEREGNGVAGAKSERRSHHREGS
RSARGDGERSSRGEEGGNGGRRRHRQRTGKVQSALEGGEQRENGEREECKPPGHRQTEMG
GDMLPATSQQLAVGKRWGLEKPEDSDNQRNVSRTGGLGVHIPVTITSPPGETTLIAMNSI
DSETVPMTEKNLEEVNQSCPRPILPYSSMFIFSPNNPVRRLCHYIVSLRYFEMCILMVIA
MSSIALAAEDPVNANALRNYVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNI
LDFIVVSGALVAFAFSSFMGSHQSPNRGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKA
VFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKSLERDCRGQFLEYD
KNEVSAQPREWKKYDFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRI
EMSLFYVAYFVVFPFFFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLT
RYMPQNQQSFQYRMWKFVVSPPFEYSIMIMIALNTVVLMMKYYDAPAAYEAMLKYLNIVF
TALFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDILVTEINTTDRLLNLSFLRLF
RAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIGMLFFIYAIIGMQVFGNIDLNEDT
AINHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRACDVNSGTPGNECGSDFAYFYF
VSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYKD
MYNLLRIISPPLGLGKNCPNRVAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLAS
GIVAQRLCDAELKKELATVWPNLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRA
KKIQMQQQQSKDQPGPQNNVGALLEPILSPMQEKSRSMMDYPSDIQPPIRPSSATLNNGH
TPHDNAIKGSSSWASEKTKEVQRSKKRPILRGQSEDISNTNTAQVSVEMRKMENSANTVA
PAGLEGQGRAVSMPKLNAEMQRSHSRHSPGTLLAPIPDSPLRRSVSTFAPQRPPEVIAND
YVLEKPAQERLHHHHHHRCHHRRDREKKQRSLDRSPGGQPNSTAATAADSAGNSSFRERG
HDRGRSHERKHHSSTAEKQRYYSCDRYGSREHFPAKPAPASCATSPGEAQETTFTKQGSG
WAKGSPVLLSSGSSTPSRGRRQLPQTPLTPRPAVTYRTANSSPVSSVGAQTTLPPPSPVM
RISSEPYLRPQTTLLSPQQIVTLPPLSQHSLLGMPNGYHYIMGVTAGPGGSSDNVQRYYP
EAEEEEWC
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtttcgaagatgacctgccggtccggtatggaggcggctctccgtcgggtgcg
ggccgagggccgagccggcagcagggtcccccgggcgcccacaggatctataaacagacc
atggcccagcgagcccgcaccatggccatctacaaccccatccctgtcaagcagaactgc
ctcaccgtcaaccgctctctcttcatcttcagcgaggataacgtgattcggaagtacgca
aagagagtcactgagtggcctccatttgagtacatgatcctcgccaccatcattgccaac
tgcattgtcttggccttggagcagcatttacctgcggatgataaaaccccaatgtccgag
cgactggatgacacagagccctacttcattggcatattttgctttgaggctgggattaag
atcattgcacttggctttgcttttcataaaggctcctacctccgtaacggctggaatgta
atggatttcgtcgttgtgctgacggggattctgactaccgttgggacagattttgacttg
cggacgctcagggcagtgcgagtccttcggccgcttaagctggtgtctggaattcccagt
cttcaggtggttctgaagtccatcatgaaagccatggtgcctctgctgcagatcggcctg
ctgctcttctttgctatcctcatgtttgccatcattggtctggacttctacatgggcaag
ttccaccgtgcctgcttcagagacgacactaatgagcaggtggctgagttcccctgtggc
ctggatcctccagcacgcctctgcgagaatggcaccacctgtcgggagtactggcctggc
cctaactttggcatcaccaactttgacaacatcctgttcgccgtgctcactgtcttccag
tgcattaccatggagggctgggtggaaatcctttacaatgccaacgatgcctcagggaac
acctggaactggctgtacttcatccccctcatcatcatcggcgccttcttcatgctcaac
ctggttctgggagtgctgtcaggggagttcgctaaggagcgggagcgtgtggaaaagagg
caggagttcctaaagctgcgcagacagcagcagattgagcgtgagctcaccggctacctg
gagtggatctgcaaagcagaggaagtcatgcttgctgaggaggacaagaatgcagaggag
aagtctccactggatggtgcctggtacaagaggaaatgcaacaacccagttctgaaaaga
tccaagaagagcaagaatgacctcatcaatgcagaagaaggggaggatcatttcacggat
atctcatcagtcgcaccccagggctccccctttgctcgggccagtgtgaagagcagcaag
aacgagagctcctcatatttgcgcaggaaagaaaagcgagtgcgcttcttcatccggcgc
atggtgaagtctcagggcttctactggactgtgctgtgcctggtgggcctgaacacgctg
tgtgtggctatagtgcactacgaccagcccaagtggctcaccgacgctctctatctggca
gagtttgtgttcttgggcctgttcttgattgagatgagtctgaagatgtacggtctcggc
cccctgaactacttccactcttccttcaactgttttgactttggcgtgattgtatggagt
attttcgaggtgatatgggcggcagttaaacccggggcatctttcggcatcagcgtgtta
cgagctctgcggctgctgaggatcttcaaggttacaaagtattggaactctttgaggaac
ctggtggtgtctctgctcaactctatgaagtccatcatcagcctgttgttcctcctgttt
ctcttcattgtggtgttcgctctgctcggaatgcaactttttgggggacagtttaatttt
gaagacgagaccccgacaacgaactttgacaccttcccagcagcaattctgacggtgttc
cagattctgacaggagaggactggaatgcagtgatgtatcatgggatcgaatctcaggga
ggagtgggcagtggcatgttctcctccgtctacttcatcgtcctgacactgtttggaaac
tacactcttcttaacgtcttcctggctattgctgtcgacaaccttgccaacgcacaggag
ctcactaaggatgaggaggaacaggaggaggccatcagtaagaagctggccctccagaag
gctaaagaggtgaaggaagtcagccccatgtcagctgctagcatctctctcgcagcgaat
tatgtctgctcccctgcccatcactacttgagccaagagcagcgacgctcgctgaagatg
atgtctgtatgggagcagcgcacctcacagatccgtaagcacatgcgagccagcagtgag
gccctgtaccatgaggaactcaaccctcgcctgacctccacccagcacctacggcccgac
atcaccacccacctggaccggccactggtggtggagccacgatgtgactgggacaagccc
agggacttgagagttgaagcaggcacacctgaggaccctaacccacaggtaccccctgac
ccccttgccatggaccctcctcaatcccagcccccacgtaaacaccatcatcggagacgt
gaccgaacttccaatgaagcccaagaaaatggtgaaactggaacctcacgtcaccatgtg
caccacagccgcagcaaggacactgagggcacacgggccaaagatggcaagagtgagcgc
agccacagccgtgatgctagaggagaacacagacatcaccgttcacatagagcagaacgc
gagggcaatggtgttgccggcgccaagagtgagagacgatcgcaccacagagaaggctca
cgctcggccaggggagacggagagaggagctcacgtggggaggaagggggcaacgggggc
aggagaaggcaccgacaacggactggaaaagtgcagtctgcactagagggcggggagcag
agggagaatggagagagagaagagtgcaagcctccaggacacagacaaaccgaaatgggt
ggagatatgctgcctgcaacttctcagcagcttgcggtggggaagcggtggggtctggag
aaaccggaggactcggacaaccagcgaaatgtcagccgcacaggaggccttggggtccac
atccccgtcaccatcacctctccacccggagagaccactctcatagccatgaacagtata
gacagcgagacggtgcccatgactgagaagaacttggaggaggtgaaccagagctgtccg
cgccctatccttccttacagctccatgtttatcttcagcccaaataacccggtgaggcgt
ttgtgccactacatagtcagtctgcgttactttgagatgtgtatcctgatggttattgcc
atgagcagcattgcactggctgcagaagacccggttaatgccaacgctctgcggaactac
gtgctgaagtatttggactatgtcttcaccggtgtattcacgtttgagatggtaattaag
atggtggatttgggcttgctgttgcatccaggctcctatttcagagacttgtggaatatt
ctggacttcattgtggtcagtggagctctggtggcattcgctttctcgagcttcatggga
tcgcatcaaagtccaaacagagggaccaaagggaaagacatcagcaccatcaagtccctc
agggtgctacgagtcctgcggcctctgaagaccatcaaacgcttaccaaaactgaaggcc
gtgttcgactgtgtggtgaactccctgaagaatgtgctgaatatcctcatcgtctacatc
ctcttcatgtttatcttcgctgtcattgccgtgcagctcttcaagggcaagttcttctac
tgcacggacgagtccaaaagcctggagagggactgcagggggcagtttctggagtacgat
aagaatgaggtctcagcccagcccagggagtggaagaaatacgactttcactatgataac
gtgctgtgggcctttcttacactcttcactgtgtccacaggggagggctggcctacggtt
ctaaagcactccgtggatgccacctttgaggaccagggtcccagccctggctaccgcatc
gagatgtccttgttctatgtggcctactttgttgtcttccccttctttttcgtcaacatc
ttcgtggccttgattattatcacgttccaggagcagggggacaaagccttgtctgagtgt
agtctggagaaaaatgagagagcctgtatcgactttgccatcaatgccaaaccgctgaca
cgctacatgccccagaaccagcagtctttccaataccggatgtggaagtttgtcgtttct
ccacctttcgagtactctattatgatcatgatcgccctcaacactgtggtcctcatgatg
aagtactacgatgctccagccgcctatgaagcaatgctgaagtatctcaacatcgtcttt
actgcccttttttcactggagtgtattctgaagatcattgcttttggccctttgaactac
ctgaaagatgcgtggaatgtgtttgactttgtgacagtgctggggagtattacggatatc
ctggtcactgagattaatactacggaccgtctgttaaacctgagcttcctaaggctgttc
cgagcggcccgtctcatcaagctcctccggcagggttacaccatccgcatcctgctttgg
acatttgtgcagtcgttcaaggctctgccttatgtctgccttctgatcggaatgctgttc
ttcatttatgccattataggaatgcaggtctttggaaacattgacctgaacgaggacacg
gccatcaaccaccacaacaacttccgcactttcctgcaagctctcatgctgctcttcagg
agtgctacaggagaggcctggcatgagatcatgctgtcgtgtctgagtcaccgtgcatgt
gatgtgaactccggcacgccaggaaatgagtgcggcagcgactttgcctacttttacttt
gtctccttcatcttcctttgctctttcctgatgctgaatctgtttgtggctgtgatcatg
gataatttcgagtacctgacccgagactcctccatcttgggtccccaccacctggatgag
ttcatccgcgtgtgggctgagtacgacccggctgcatgcggacggatttcctataaggat
atgtacaatttgttgcgaattatctcaccccctcttggcttagggaagaactgccctaat
agggtagcatacaagcgtttggtgaagatgaacatgcctatcgccgatgacaacacggtc
cacttcacttccacgctcatggctctaatccgcaccgcgctggagatcaaactggcctca
ggaatcgtggcccagcgtctgtgtgatgcagagctaaagaaagagctggcgaccgtctgg
ccgaacctgtctcagaagaccatggatcttctggtgacgccccacaaacctaacgagctg
acggttgggaaggtgtacgctgctctcatgatctttgactactacaaacagaaccgagcc
aagaaaatacaaatgcagcagcagcagtccaaagatcagccaggaccacagaacaatgtg
ggtgctcttctggagcccattctgagccctatgcaggagaagagcaggagcatgatggac
tatccatcagatatccagcctcccatcagacccagctctgccacactgaacaacggacac
acaccccatgacaacgccattaaaggctcctcgtcttgggcttcagagaaaaccaaagag
gtccagaggtcaaagaaacgacccatcctgaggggccagtctgaagacatctcaaacaca
aacactgcccaggtgtcagtagagatgagaaaaatggagaacagtgccaacacagtagct
cctgctggtttagagggtcaaggacgagcagtatccatgcccaaactcaatgcagagatg
cagagaagtcattcacgtcactctccaggaaccttacttgcaccgattcctgactccccc
ctgaggcgctcggtgtccacgtttgccccgcagcgtcctccggaggttattgcgaacgac
tatgttctggagaagcctgcacaagagcgactgcatcaccatcatcatcaccgctgccat
caccggagagacagagagaagaagcagaggtcgctggataggtcacccggtggacagcct
aatagcacggctgccacggcagctgactctgcggggaactcctcatttcgggagaggggg
cacgaccgaggccgttcccatgaaaggaaacaccattcatcaacagcggagaagcaacgt
tactactcatgcgatcgctacggcagccgcgagcactttcccgctaaacctgcgccagcc
agctgtgccacctcgcccggagaggctcaggagaccaccttcaccaagcagggcagtggt
tgggctaaagggagcccggtgttgttgagttcgggctcgagcacgcccagccgcgggcgc
aggcagctgccccagacgcccctgacccctcgcccagcggtgacctacaggactgccaac
tcctcccccgtgtcctctgtgggcgcccagaccaccctccctcccccgagtcccgtaatg
cgcatcagctccgagccgtacctccggccccagacgacactgctgagcccacagcagatc
gtgaccctcccgccactgtcccagcattccctgctcgggatgcccaacgggtaccactac
atcatgggtgtgaccgcggggcctggcggcagcagcgacaacgtccagcgctactaccct
gaagcagaggaggaagaatggtgctag
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integrated database retrieval system
