Pangasianodon hypophthalmus (striped catfish): 113536920
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Entry
113536920 CDS
T05759
Symbol
fbxw8
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 8
KO
K10264
F-box and WD-40 domain protein 8
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113536920 (fbxw8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113536920 (fbxw8)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113536920 (fbxw8)
Cul7 complex
Target recognizing subunit
113536920 (fbxw8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
WD40_CDC20-Fz
Beta-prop_SCAP
Beta-prop_EML_2
EIF3I
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
WDR54
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
113536920
NCBI-ProteinID:
XP_026786888
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MEGEDELLDFRKRWKQELEKKTKVKNDSAVAYLGHCSKAGGTAEQRRGHAGTPEEKARDA
EGSKRREEGCEDQPQYVSIAEGLLDGRSSPLLARMEEERVRRKRRCVRGDEQQQLLSAPH
THSTAHLTLIDQFIQDLNEVNEIPFFDVELPYELALKIFQFLNKADLGRCAQVSKSWRVL
AEDEVLWYRLFLEEGYHRGASVSDSPCWKSTLRDCINTEKNVKYNWKNRVGSISHLQYEL
GKVLCDVSSCERLVIAGYTSGDVRLWDTLHWDSGALNLQPAHSTRAETPLPHVSLVRVTD
TVACAAYENGCVDVWSTESGVEPIHHYQHLQRVCALDLCADAPVVTSASGSEVRVDTPDD
RGYWRTVCLTQLAKPVDGVMVVPGKRESPLVSAWAGESVYLLDPSEREEESDEEEGARVL
HSVYGHPVTCLDVSACRAAVGVKSCGWGMNDGGNKVYIYTLEDRVPVVTIGRSPDFSCVN
DTSPQXLMYIHPSSCFVLLLRRVRVFDLRSGSSVVSLYAHHMGVTTVQADDWKIVSGGGE
GLVCVWEMRMGAKLWEMHNRHPVRHIRFNSSTLVTANIPDEKNPRGACITDDDLTAHRRH
RGVICYYDFSMDSSSQEHVLPICRSDYTETSGYNYNIGLAMPYDTLADPQGSGL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgaagacgagcttttggactttcgaaagcggtggaaacaggaactggagaaa
aagactaaggtaaaaaacgacagtgctgtggcttatttgggacactgcagtaaagcgggt
ggaactgctgagcagagacgcggccatgctgggacacctgaggagaaagccagagatgct
gaaggctcgaaacgtcgtgaggagggctgtgaagatcagcctcagtacgtgtccatcgca
gagggtttgctggatggaaggagcagccccctgctggccaggatggaggaggagagagtg
cggaggaagcggcgctgtgtgcggggagatgagcagcagcagctcctctcagctccacac
actcacagcacagctcatcttacactcatcgaccagtttattcaggatctgaacgaggtg
aatgaaatccctttcttcgacgttgagctgccgtatgaactggctctgaagattttccag
ttcctgaacaaagctgatctgggacgatgtgctcaggtgagtaagtcatggagagtgtta
gcggaggacgaggtcctgtggtacaggttgttccttgaggaggggtatcaccgaggggcg
agcgtctccgactccccctgctggaaaagcacactgagagattgcattaacactgagaaa
aatgtaaagtacaactggaagaatcgagtcggctcaatcagccatctgcagtatgaacta
ggaaaagtgttgtgtgacgtcagttcctgtgaaagactggtcattgctgggtatacctca
ggtgacgtgcgactgtgggacactctccactgggactcgggtgctttgaatctgcagcct
gcccacagcaccagagccgagaccccattgccacacgttagtctggtacgagtcaccgac
actgtggcctgcgctgcctatgagaatgggtgtgtggatgtttggagcactgaatctggt
gtagagccaatccatcactatcagcacctgcagcgggtgtgtgccctcgatctgtgcgct
gatgctccagtcgtgacctctgcgtctgggtcggaggtgcgagtggacactccagatgat
cggggctactggaggaccgtgtgtctcacccagttggctaaacctgtggacggagtgatg
gtggttccaggaaagcgggagagcccactggtttcagcctgggctggtgagagtgtgtat
ctgctggatccaagtgagagagaggaagaaagtgatgaagaggaaggagccagagtgctt
cactctgtatatggccaccctgttacctgcctggatgtgagcgcatgccgagctgccgtg
ggggtgaagagctgcggctggggcatgaacgatggcggtaacaaggtttacatttacact
ttggaggacagggtacctgtagtcacaatagggagatcaccagacttttcatgtgtaaat
gacacgtctccacagtaattgatgtacatccatccgtcttcgtgttttgttttactcttg
cgcagggtgcgagtgtttgacctgcgttctggctcctcggtggtatcgctgtatgcccat
cacatgggcgtgaccacggtgcaggcggacgattggaagatcgtgagcggaggcggagag
ggattggtctgcgtgtgggaaatgaggatgggggcgaaactctgggagatgcacaacagg
cacccagtccgtcacatacggtttaacagcagcaccctggtgacggccaacatccctgat
gaaaagaacccacgtggagcatgcatcactgacgatgacctcactgctcaccgcagacac
cggggggtgatctgctactacgatttctccatggattcctcctcccaggaacacgtgctg
cccatctgcaggtccgactacaccgagacgagcggctacaactacaacatcggcctggct
atgccttacgacacgctcgctgatcctcagggctcggggctctga
DBGET
integrated database retrieval system
