Pangasianodon hypophthalmus (striped catfish): 113537036
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Entry
113537036 CDS
T05759
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137
Mitophagy - animal
phyp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113537036 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113537036 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113537036 (vcp)
03009 Ribosome biogenesis [BR:
phyp03009
]
113537036 (vcp)
04131 Membrane trafficking [BR:
phyp04131
]
113537036 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113537036 (vcp)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113537036 (vcp)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
113537036 (vcp)
Membrane trafficking [BR:
phyp04131
]
SNARE
SNARE associated proteins
Others
113537036 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113537036 (vcp)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113537036 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
113537036
NCBI-ProteinID:
XP_026787113
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDSCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGSVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKAN
LRKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQAG
GGPSQGSAGGSGGNIFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggcggagaatctaaaaatgatgatctttctactgccattctaaaacaaaag
aacagacccaacaggttgattgttgatgaatccatcaatgaagataatagtgtggtctcc
ctctctcaggccaagatggacgagcttcagcttttcaggggagacactgtgctgctgaag
ggcaagaaaaggagggagaccgtttgcatcgtactgtctgacgatagctgctctgacgag
aaagtgcgcatgaacagggtggtgcgcaataacctcagggttcgcctcggagatgtcatc
agcattcagccatgtccagatgtgaagtatgggaaacgcatccatgttctgcccattgat
gacacagtggagggaatcactggcaacttatttgaggtgtacctgaagccttacttccta
gaggcttaccggccaatccgtaaaggcgatatcttcctggtgagaggaggcatgcgtgct
gttgagtttaaagtggtggagactgacccaagcccttactgtatagtggctcctgacact
gtcattcactgtgaaggagaacctattaagcgtgaggatgaggaagaatctctgaatgaa
gtaggctacgatgacattggaggtgtgaggaagcagctggctcagatcaaagaaatggtg
gagctgccactcaggcacccagcactcttcaaggccatcggtgtgaaacctccccgtggt
attcttctgtacggaccccctggaactggaaaaactctgatcgctcgtgctgttgcaaac
gaaactggagcattcttcttcctgatcaatggccctgaaatcatgagtaaactggctggt
gagtctgagagcaacctgcgtaaagcttttgaagaagctgagaagaacgctcctgccatc
atcttcattgatgaactggatgctattgcacccaagagagagaagactcacggtgaagta
gagaggcgcatcgtgtctcagctgctcaccctgatggacggactgaagcagcgggctcac
gtcatcgtcatggctgccaccaacagacccaacagcattgacccagctctcaggagattc
gggcgctttgacagagaggtggacattggcattcctgatgctacaggaagactggaaatc
ctgcagatccacactaagaacatgaagctggctgatgatgttgacctggagcaggttgcc
aacgagacccatggtcatgtgggtgctgatttggctgccctctgctcagaggctgcactg
caggccatccgcaagaagatggacctcattgacctggaggatgagacaatcgacgcagag
gtcatgaactccctggctgttaccatggatgactttaggtgggccctgagccagagcaac
ccatcagctctgcgtgagactgtggttgaggtgcccaacatcacctgggaggacattggt
ggactggatgatgtcaagagagaactgcaggaactggtgcagtacccagtggagcatcca
gacaaattcctgaaatttggtatgactccatccaagggtgtgttgttctatgggccgcca
ggttgtggtaaaaccctcctggccaaggccattgccaatgagtgccaggccaacttcatt
tccatcaaaggccctgaactgctaaccatgtggtttggagagtctgaagctaatgttcgt
gagatctttgataaggctcgtcaagctgccccctgcgtgctcttctttgatgagctggac
tccattgctaaagcccgtggtggaagcgtgggtgatggcggtggagcggctgaccgtgtc
attaaccagatcctgacagagatggatggcatgtccagcaagaagaatgtcttcatcatc
ggcgccaccaacagaccggatatcatcgaccctgccatcctcaggcctggtcgtctggac
cagcttatctatatcccactgcccgatgagaaatcccgcatggccatccttaaagctaac
ctcaggaagtctccaatcgccaaggatgtagacctggacttcctggccaagatgaccaat
ggcttctccggcgctgacttaacagaaatttgccagagagcctgcaaactggctattcgt
gagtccattgagaatgagatcaggagggaacgtgagaggcagacaaacccatcagccatg
gaggtggaggaggacgacccagtgcctgagatcaggaaggaccactttgaggaggccatg
cgtttcgcccgtcgctccgtcagcgacaacgacatccgcaaatacgagatgtttgcacag
accctgcagcaaagcagaggcttcggcagcttcagattcccttctagtaatcaggcagga
ggtggaccaagccaaggttctgcaggtggcagtggagggaacatcttcaacgaggacaac
gatgatgacctttacggataa
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integrated database retrieval system
