Pangasianodon hypophthalmus (striped catfish): 113537205
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Entry
113537205 CDS
T05759
Symbol
ttf1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113537205 (ttf1)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
113537205 (ttf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF7662
Motif
Other DBs
NCBI-GeneID:
113537205
NCBI-ProteinID:
XP_026787400
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MGKTKEKKTRKQKSGYLLETAPVCVLTCENLQEDQLQTIKDKENPITDISVSMESLPEKP
KKKQKRKHLSEQQSENEKSSTEPHTEGHQENRKLKKKKKLRTEAVNHDKETKDEDVEHSI
STEEPPRKKKKREKTKEGNKAKELETQRNEKSEESPTRKKKKKNKLKASKENIAGKRKET
EEVNSAVESETRSNKVLAKEKKKKNHKSKDKDGGNLAKQSKNVQPPRTFPNIISPDVKEE
ETGIQIKESTGIDASLLMQLKEFIPDIESKEPVSISKMIKYDLPRFKEFKQQGISVNHGR
FTAQENERLRKNVRDFMALTAIDSATKLFFTHRFKQDQENIKKLKVTYKFFERIAEGIPR
SCYYVYARGRRMFDEQNYQGEFTKAELHTLNKLHNLHGNNWKKISELTGRSALSLQKRYT
QLANKEGPWSKKEVQRLLRAVRDHIVSQIPGGASSSGSIRVMKETLYKRLPLQKIAMKVK
TRSWSQCREKWMGILAVKMSFGAVCTEKKSLDVQVKLIKGMYEMDVDDAAHVNWEDLTAL
IGDVPPAYVQRKWHKLKVCHVPEWQRKCFADIVDFLYENVLPQLEQKLMSYQNLDETQHN
ENEESYLLSDIFQDINEDEDVDDDEEEEEEEENNEGNKEKETQ
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaccaaggaaaagaagacccgaaagcagaaaagtggttatcttttggaaact
gcacctgtctgcgttcttacctgtgaaaatcttcaagaagatcaattgcaaacaattaaa
gataaagaaaatcccataacagacatttcagtgagcatggaaagtttgccagaaaagcct
aaaaagaagcaaaagagaaaacatttgtctgagcaacaatctgagaatgagaagagttcg
acagagccgcatactgagggtcaccaggaaaacagaaagctaaaaaagaagaagaaatta
aggactgaggcagtaaatcatgataaagagaccaaagatgaggatgtggagcactccata
agtacagaagaacccccaagaaaaaagaaaaagagagaaaagacaaaggaagggaacaaa
gccaaggagttggagacacaaagaaatgaaaaaagtgaagaatcaccaactaggaagaag
aaaaagaaaaataagctgaaagcgtcaaaggagaatatcgcaggaaagagaaaagagaca
gaggaagtaaattcagctgtggaatcagagacacgaagcaacaaagtactggcaaaggaa
aagaaaaagaagaatcataaatccaaagacaaggacggtggcaatttggcgaaacagagc
aagaatgtgcagccaccacgcacctttccaaacatcattagtcctgatgttaaagaagag
gagacgggaatccaaataaaagagtccacggggatcgatgcaagtcttttgatgcagctg
aaagaatttattcctgatatagagtcaaaggagccggtgagcatcagtaaaatgatcaaa
tacgacttgccaagatttaaggaattcaaacagcaaggcatctctgtgaatcacggacgt
ttcactgcacaagaaaacgagaggctgaggaagaacgtcagagacttcatggctctcact
gcaatagacagcgccaccaaactgttcttcacacatcgctttaagcaggatcaagagaac
ataaagaagctcaaagttacgtacaaattctttgaaaggatagcggaaggaattcccaga
tcctgttattatgtttatgctcgtggaagaagaatgttcgatgagcaaaactaccaggga
gagtttacgaaagcagaactgcacactttgaacaagttgcacaatttacatggtaataat
tggaagaagatttcagagttgaccggtcgaagtgccttatcgctccagaaacgttacaca
cagcttgctaataaggaaggcccctggtccaagaaggaggtacagagacttttgagagct
gtacgagatcatatagtgagccagatcccaggtggagccagcagtagcgggtccataaga
gtgatgaaggaaacgttgtataaaaggctccccttgcagaagatcgctatgaaggtgaaa
actcgctcgtggtctcagtgcagggagaaatggatgggaattttggcagtgaaaatgtcc
tttggagccgtgtgcacagagaagaaatctcttgatgtccaagtcaaactcataaaaggg
atgtatgaaatggacgtagatgatgctgcccatgtcaactgggaggacttgacagcactg
attggggatgtacctccagcatacgtgcaaagaaaatggcacaaactgaaagtgtgccat
gtgcctgaatggcaacgaaagtgttttgcagatatcgttgactttctgtatgagaacgtt
ttaccacagctcgagcagaagctgatgtcctaccagaacttggacgagactcagcataat
gaaaacgaggagagctatcttctctcagacatatttcaggacataaatgaggatgaagat
gtggatgatgatgaggaggaggaggaggaggaggagaacaatgaagggaacaaggaaaaa
gaaactcagtag
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